RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SUGT1Q9Y2Z0 365 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 EMC9Q9Y3B6 208 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 MRPL42Q9Y6G3 142 aaKnown RBP7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 KDM2BQ8NHM5 1336 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 CAPNS1P04632 268 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 TPP2P29144 1249 aaPredicted RBP7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 CLEC16AQ2KHT3 1053 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 CRTC3Q6UUV7 619 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 THAP5Q7Z6K1 395 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 NLGN1Q8N2Q7 840 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 DAGLBQ8NCG7 672 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 BVESQ8NE79 360 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 ENOX1Q8TC92 643 aaKnown RBP7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 TCTN2Q96GX1 697 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 ZDHHC15Q96MV8 337 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 DSCC1Q9BVC3 393 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 KRTAP4-8Q9BYQ9 185 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 TRIT1Q9H3H1 467 aaKnown RBP7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 ATP13A1Q9HD20 1204 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 GPATCH2Q9NW75 528 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 AKT3Q9Y243 479 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 SNX11Q9Y5W9 270 aa7.74□□□□□ -1.17
HMGCS1-207ENST00000514610 FAM153BP0C7A2 387 aa7.73□□□□□ -1.17
HMGCS1-207ENST00000514610 CD96P40200 585 aa7.73□□□□□ -1.17
HMGCS1-207ENST00000514610 WFDC3Q8IUB2 231 aa7.73□□□□□ -1.17
HMGCS1-207ENST00000514610 TRIM59Q8IWR1 403 aa7.73□□□□□ -1.17
HMGCS1-207ENST00000514610 JMYQ8N9B5 988 aa7.73□□□□□ -1.17
HMGCS1-207ENST00000514610 MCMBPQ9BTE3 642 aa7.73□□□□□ -1.17
HMGCS1-207ENST00000514610 ARHGEF4Q9NR80 690 aa7.73□□□□□ -1.17
HMGCS1-207ENST00000514610 DIS3Q9Y2L1 958 aaKnown RBP7.73□□□□□ -1.17
HMGCS1-207ENST00000514610 TLDC2A0PJX2 215 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 SMARCA5O60264 1052 aaPredicted RBP7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 KCNH1O95259 989 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 ESR1P03372 595 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 GRIA2P42262 883 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 PPP2R2AP63151 447 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 BNIP3Q12983 259 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 AOC3Q16853 763 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 USHBP1Q8N6Y0 703 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 ZNF655Q8N720 491 aaPredicted RBP7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 SH3TC2Q8TF17 1288 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 BTN2A2Q8WVV5 523 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 SGSM3Q96HU1 749 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 HRASLS5Q96KN8 279 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 LRP2BPQ9P2M1 347 aa7.72□□□□□ -1.17
HMGCS1-207ENST00000514610 IQCA1LA6NCM1 817 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 NOP56O00567 594 aaKnown RBP7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 COBLO75128 1261 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 VAMP4O75379 141 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 GRIK1P39086 918 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 CD97P48960 835 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 PRKCQQ04759 706 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 SQSTM1Q13501 440 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 C2orf27AQ580R0 203 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 YOD1Q5VVQ6 348 aaPredicted RBP7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 FOXB2Q5VYV0 432 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 INTS5Q6P9B9 1019 aaKnown RBP7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 NFXL1Q6ZNB6 911 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 LRRC47Q8N1G4 583 aaKnown RBP7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 BSDC1Q9NW68 430 aaPredicted RBP7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 SF3B6Q9Y3B4 125 aaKnown RBP7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 PCDHA11Q9Y5I1 949 aa7.71□□□□□ -1.18
HMGCS1-207ENST00000514610 AGRPO00253 132 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 GSNP06396 782 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 SPINK2P20155 84 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 SSTR4P31391 388 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 CYP4F3Q08477 520 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 GRB10Q13322 594 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 GTF2IRD2BQ6EKJ0 949 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 GTF2IRD2Q86UP8 949 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 ZBTB38Q8NAP3 1195 aaPredicted RBP7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 THAP3Q8WTV1 239 aaPredicted RBP7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 BCL7CQ8WUZ0 217 aaPredicted RBP7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 FOXP3Q9BZS1 431 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 DUSP13Q9UII6 198 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 VAV3Q9UKW4 847 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 GPR55Q9Y2T6 319 aaPredicted RBP7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 PTCH2Q9Y6C5 1203 aa7.7□□□□□ -1.18
HMGCS1-207ENST00000514610 PRNPP04156 253 aa7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 SYPP08247 313 aa7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 BMP8BP34820 402 aa7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 SF1Q15637 639 aaKnown RBP7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 DPY19L1Q2PZI1 675 aa7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 ZNF574Q6ZN55 896 aaPredicted RBP7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 TMPRSS7Q7RTY8 843 aa7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 SPRED2Q7Z698 418 aa7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 DTX1Q86Y01 620 aa7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 CREG2Q8IUH2 290 aa7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 ASB11Q8WXH4 323 aa7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 SLC12A9Q9BXP2 914 aa7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 TMA7Q9Y2S6 64 aaKnown RBP7.69□□□□□ -1.18
HMGCS1-207ENST00000514610 ESYT3A0FGR9 886 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 KIAA1324LA8MWY0 1029 aaPredicted RBP7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 ZNF205O95201 554 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 CD3EP07766 207 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 IFNGR1P15260 489 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 VAV1P15498 845 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 LTKP29376 864 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 TEKQ02763 1124 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 HSP90AA2PQ14568 343 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms