RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SART3Q15020 963 aaKnown RBP9.73□□□□□ -0.85
CCL28-204ENST00000514421 SEC23AQ15436 765 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 IFIT1BQ5T764 474 aaKnown RBP9.73□□□□□ -0.85
CCL28-204ENST00000514421 STOX1Q6ZVD7 989 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 KCTD1Q719H9 257 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 PLEKHH3Q7Z736 793 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 NBPF11Q86T75 865 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 ENAHQ8N8S7 591 aaPredicted RBP9.73□□□□□ -0.85
CCL28-204ENST00000514421 SHCBP1Q8NEM2 672 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 RAET1EQ8TD07 263 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 KIFC2Q96AC6 838 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 CHMP4CQ96CF2 233 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 MTA3Q9BTC8 594 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 MOV10L1Q9BXT6 1211 aaKnown RBP9.73□□□□□ -0.85
CCL28-204ENST00000514421 SPATC1LQ9H0A9 340 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 PORCNQ9H237 461 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 CWC22Q9HCG8 908 aaKnown RBP9.73□□□□□ -0.85
CCL28-204ENST00000514421 ISY1Q9ULR0 285 aaKnown RBP9.73□□□□□ -0.85
CCL28-204ENST00000514421 HPS5Q9UPZ3 1129 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 MTMR7Q9Y216 660 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 CTDP1Q9Y5B0 961 aaPredicted RBP9.73□□□□□ -0.85
CCL28-204ENST00000514421 ATAD5Q96QE3 1844 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 ST18O60284 1047 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 SNHG28P0DPA3 235 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 MCM5P33992 734 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 FLT3LGP49771 235 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 STAT2P52630 851 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 PRKCZQ05513 592 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 IKQ13123 557 aaPredicted RBP9.72□□□□□ -0.85
CCL28-204ENST00000514421 IRF5Q13568 498 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 KRT32Q14532 448 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 PLS1Q14651 629 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 BTNL9Q6UXG8 535 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 CHST3Q7LGC8 479 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 GPR142Q7Z601 462 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 RIOX2Q8IUF8 465 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 MB21D2Q8IYB1 491 aaPredicted RBP9.72□□□□□ -0.85
CCL28-204ENST00000514421 TMTC2Q8N394 836 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 REPS2Q8NFH8 660 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 IGDCC4Q8TDY8 1250 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 NEK1Q96PY6 1258 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 NUDT12Q9BQG2 462 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 MROH8Q9H579 483 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 SLC38A10Q9HBR0 1119 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 CHMP5Q9NZZ3 219 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 GABRQQ9UN88 632 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 PTCH2Q9Y6C5 1203 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 TNKSO95271 1327 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 LAMB1P07942 1786 aa9.72□□□□□ -0.85
CCL28-204ENST00000514421 SLC15A5A6NIM6 579 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 CCDC85CA6NKD9 419 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 ATP2A1O14983 1001 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 PDHBP11177 359 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 ERCC3P19447 782 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 PTPREP23469 700 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 COPB2P35606 906 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 OAZ1P54368 228 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 ZNF543Q08ER8 600 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 WTAPQ15007 396 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 NFKBIBQ15653 356 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 CCDC96Q2M329 555 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 GPATCH4Q5T3I0 446 aaKnown RBP9.71□□□□□ -0.86
CCL28-204ENST00000514421 WDR78Q5VTH9 848 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 TTBK2Q6IQ55 1244 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 CLEC17AQ6ZS10 378 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 NCAPG2Q86XI2 1143 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 RASEFQ8IZ41 740 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 CPXCR1Q8N123 301 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 PXYLP1Q8TE99 480 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 TM6SF1Q9BZW5 370 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 GPCPD1Q9NPB8 672 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 PRR12Q9ULL5 1215 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 IVNS1ABPQ9Y6Y0 642 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 PTPRFP10586 1907 aa9.71□□□□□ -0.86
CCL28-204ENST00000514421 PRC1O43663 620 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 ADCY3O60266 1144 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 HMGB1P09429 215 aaKnown RBP9.7□□□□□ -0.86
CCL28-204ENST00000514421 XRCC5P13010 732 aaKnown RBP9.7□□□□□ -0.86
CCL28-204ENST00000514421 CYP2B6P20813 491 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 GRK4P32298 578 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 SLC16A2P36021 539 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 ANTXR2P58335 489 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 EXOSC10Q01780 885 aaKnown RBP9.7□□□□□ -0.86
CCL28-204ENST00000514421 SLC9C1Q4G0N8 1177 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 MORN1Q5T089 497 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 SYDE2Q5VT97 1194 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 DHX32Q7L7V1 743 aaKnown RBP9.7□□□□□ -0.86
CCL28-204ENST00000514421 CATIPQ7Z7H3 387 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 TRMT44Q8IYL2 757 aaKnown RBP9.7□□□□□ -0.86
CCL28-204ENST00000514421 SLAIN1Q8ND83 568 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 SOCS4Q8WXH5 440 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 USP6NLQ92738 828 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 ARMC5Q96C12 935 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 TMEM87BQ96K49 555 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 TEX13BQ9BXU2 312 aa9.7□□□□□ -0.86
CCL28-204ENST00000514421 RAVER2Q9HCJ3 691 aaKnown RBP9.7□□□□□ -0.86
CCL28-204ENST00000514421 BIN2Q9UBW5 565 aaPredicted RBP9.7□□□□□ -0.86
CCL28-204ENST00000514421 ZNF214Q9UL59 606 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms