RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 KCTD2Q14681 263 aa13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 IMMTQ16891 758 aaKnown RBP13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 FAM160B2Q86V87 743 aa13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 REPS2Q8NFH8 660 aa13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 ESR2Q92731 530 aa13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 HTATIP2Q9BUP3 242 aa13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 DSCC1Q9BVC3 393 aa13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 TEX13BQ9BXU2 312 aa13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 RAVER2Q9HCJ3 691 aaKnown RBP13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 ZNF214Q9UL59 606 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF28-213ENST00000513841 ATP2A1O14983 1001 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 CHMLP26374 656 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 NOVP48745 357 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 SNRNP48Q6IEG0 339 aaKnown RBP13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 KCTD1Q719H9 257 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 NECAB2Q7Z6G3 386 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 UBE2Q1Q7Z7E8 422 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 ANKLE1Q8NAG6 615 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 DDX11Q96FC9 970 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 PAWRQ96IZ0 340 aaKnown RBP13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 TMEM47Q9BQJ4 181 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 SLC38A10Q9HBR0 1119 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 RIPK3Q9Y572 518 aa13.65□□□□□ -0.22
ARHGEF28-213ENST00000513841 HTTP42858 3142 aa13.64□□□□□ -0.23
ARHGEF28-213ENST00000513841 PLA2G6O60733 806 aa13.64□□□□□ -0.23
ARHGEF28-213ENST00000513841 PGK2P07205 417 aa13.64□□□□□ -0.23
ARHGEF28-213ENST00000513841 STAT2P52630 851 aa13.64□□□□□ -0.23
ARHGEF28-213ENST00000513841 OLFML2BQ68BL8 750 aa13.64□□□□□ -0.23
ARHGEF28-213ENST00000513841 LHX8Q68G74 356 aa13.64□□□□□ -0.23
ARHGEF28-213ENST00000513841 TBC1D10CQ8IV04 446 aa13.64□□□□□ -0.23
ARHGEF28-213ENST00000513841 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
ARHGEF28-213ENST00000513841 OGDHLQ9ULD0 1010 aa13.64□□□□□ -0.23
ARHGEF28-213ENST00000513841 DIS3Q9Y2L1 958 aaKnown RBP13.64□□□□□ -0.23
ARHGEF28-213ENST00000513841 OAZ1P54368 228 aa13.63□□□□□ -0.23
ARHGEF28-213ENST00000513841 CCDC178Q5BJE1 867 aa13.63□□□□□ -0.23
ARHGEF28-213ENST00000513841 PRAMEF19Q5SWL8 479 aa13.63□□□□□ -0.23
ARHGEF28-213ENST00000513841 DCAF4Q8WV16 495 aa13.63□□□□□ -0.23
ARHGEF28-213ENST00000513841 MAML3Q96JK9 1138 aa13.63□□□□□ -0.23
ARHGEF28-213ENST00000513841 ZKSCAN3Q9BRR0 538 aa13.63□□□□□ -0.23
ARHGEF28-213ENST00000513841 ZSWIM5Q9P217 1185 aa13.63□□□□□ -0.23
ARHGEF28-213ENST00000513841 RLFQ13129 1914 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 PLXNB2O15031 1838 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 B4E1Z4 1266 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 KDM4AO75164 1064 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 IGHA2P01877 340 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 NT5C2P49902 561 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 CCDC96Q2M329 555 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 ZNF792Q3KQV3 632 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 IQCA1Q86XH1 822 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 DGKHQ86XP1 1220 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 ANKRD35Q8N283 1001 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 CHST13Q8NET6 341 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 KRT23Q9C075 422 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 IL25Q9H293 177 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 GPCPD1Q9NPB8 672 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 FBXO40Q9UH90 709 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 PRR12Q9ULL5 1215 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 NR2E3Q9Y5X4 410 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 CENPFP49454 3210 aa13.62□□□□□ -0.23
ARHGEF28-213ENST00000513841 MSCO60682 206 aa13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 SLC16A2P36021 539 aa13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 SNAP25P60880 206 aa13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 TTBK2Q6IQ55 1244 aa13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 CCDC174Q6PII3 467 aa13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 CENPQQ7L2Z9 268 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 TRPV1Q8NER1 839 aa13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 DIS3LQ8TF46 1054 aaKnown RBP13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 AGBL1Q96MI9 1066 aa13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 TINF2Q9BSI4 451 aa13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 CNNM2Q9H8M5 875 aa13.61□□□□□ -0.23
ARHGEF28-213ENST00000513841 RBBP6Q7Z6E9 1792 aaKnown RBP13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 GREB1LQ9C091 1923 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 H0YGN5 161 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 EVI5O60447 810 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 ALAS1P13196 640 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 PTH1RQ03431 593 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 TRDNQ13061 729 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 TKFCQ3LXA3 575 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 BTNL9Q6UXG8 535 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 KIAA1211Q6ZU35 1233 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 ARRDC4Q8NCT1 418 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 ANKS1AQ92625 1134 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 TRERF1Q96PN7 1200 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 ZSCAN10Q96SZ4 725 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 C11orf49Q9H6J7 331 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 HOMER2Q9NSB8 354 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 NEDD4P46934 1319 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 FRMPD2Q68DX3 1309 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 RAD50Q92878 1312 aa13.6□□□□□ -0.23
ARHGEF28-213ENST00000513841 SGSM2O43147 1006 aa13.59□□□□□ -0.23
ARHGEF28-213ENST00000513841 PDHBP11177 359 aa13.59□□□□□ -0.23
ARHGEF28-213ENST00000513841 CYBAP13498 195 aa13.59□□□□□ -0.23
ARHGEF28-213ENST00000513841 SYDE2Q5VT97 1194 aa13.59□□□□□ -0.23
ARHGEF28-213ENST00000513841 RASGRP2Q7LDG7 609 aa13.59□□□□□ -0.23
ARHGEF28-213ENST00000513841 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
ARHGEF28-213ENST00000513841 KAT14Q9H8E8 782 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms