RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 VAMP4O75379 141 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 GDF11O95390 407 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 ITIH2P19823 946 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 CYP27A1Q02318 531 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 TCEA2Q15560 299 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 C22orf34Q6ZV56 151 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 SHKBP1Q8TBC3 707 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 KISS1RQ969F8 398 aaPredicted RBP6.3□□□□□ -1.4
NIPBL-207ENST00000513819 PUS7Q96PZ0 661 aaKnown RBP6.3□□□□□ -1.4
NIPBL-207ENST00000513819 DBNDD2Q9BQY9 259 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 ASCC2Q9H1I8 757 aaPredicted RBP6.3□□□□□ -1.4
NIPBL-207ENST00000513819 DIS3Q9Y2L1 958 aaKnown RBP6.3□□□□□ -1.4
NIPBL-207ENST00000513819 TRBV23-1A0A0A0MS06 115 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 FAM155AB1AL88 458 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-207ENST00000513819 CAPNS1P04632 268 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 NCLP19338 710 aaKnown RBP6.29□□□□□ -1.4
NIPBL-207ENST00000513819 GYS2P54840 703 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 OXCT1P55809 520 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 CBX2Q14781 532 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-207ENST00000513819 SF1Q15637 639 aaKnown RBP6.29□□□□□ -1.4
NIPBL-207ENST00000513819 CLEC16AQ2KHT3 1053 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 DPY19L1Q2PZI1 675 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 CDKAL1Q5VV42 579 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 GTF2IRD2BQ6EKJ0 949 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 POMZP3Q6PJE2 187 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 ARHGAP27Q6ZUM4 889 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 GTF2IRD2Q86UP8 949 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 CRACR2BQ8N4Y2 399 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-207ENST00000513819 FEZ1Q99689 392 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 IER2Q9BTL4 223 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 DHRS4Q9BTZ2 278 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 OSBPL1AQ9BXW6 950 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 SLKQ9H2G2 1235 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-207ENST00000513819 LRRC4CQ9HCJ2 640 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 ATG3Q9NT62 314 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 PRR13Q9NZ81 148 aa6.29□□□□□ -1.4
NIPBL-207ENST00000513819 GPR55Q9Y2T6 319 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-207ENST00000513819 MRPS23Q9Y3D9 190 aaKnown RBP6.29□□□□□ -1.4
NIPBL-207ENST00000513819 WASH4PA8MWX3 477 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 IGLV1-40P01703 118 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 FGFR1P11362 822 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 PABPC1P11940 636 aaKnown RBP6.28□□□□□ -1.4
NIPBL-207ENST00000513819 FSTP19883 344 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 CTSKP43235 329 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 NKPD1Q17RQ9 610 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 ZC3H12BQ5HYM0 836 aaKnown RBP6.28□□□□□ -1.4
NIPBL-207ENST00000513819 CRTC3Q6UUV7 619 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 NSMFQ6X4W1 530 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 TMEM151AQ8N4L1 468 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 PIWIL2Q8TC59 973 aaKnown RBP6.28□□□□□ -1.4
NIPBL-207ENST00000513819 OSBP2Q969R2 916 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 IPO9Q96P70 1041 aaKnown RBP6.28□□□□□ -1.4
NIPBL-207ENST00000513819 HDAC8Q9BY41 377 aa6.28□□□□□ -1.4
NIPBL-207ENST00000513819 DUSP15Q9H1R2 295 aaPredicted RBP6.28□□□□□ -1.4
NIPBL-207ENST00000513819 SF3B6Q9Y3B4 125 aaKnown RBP6.28□□□□□ -1.4
NIPBL-207ENST00000513819 AMPD2Q01433 879 aa6.27□□□□□ -1.41
NIPBL-207ENST00000513819 GRB10Q13322 594 aa6.27□□□□□ -1.41
NIPBL-207ENST00000513819 FILIP1Q7Z7B0 1213 aa6.27□□□□□ -1.41
NIPBL-207ENST00000513819 SCUBE1Q8IWY4 988 aa6.27□□□□□ -1.41
NIPBL-207ENST00000513819 MCMBPQ9BTE3 642 aa6.27□□□□□ -1.41
NIPBL-207ENST00000513819 GPR62Q9BZJ7 368 aa6.27□□□□□ -1.41
NIPBL-207ENST00000513819 ST14Q9Y5Y6 855 aa6.27□□□□□ -1.41
NIPBL-207ENST00000513819 CCDC163A0A0D9SF12 145 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 H3BS24 57 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 DLX3O60479 287 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 RAPGEF3O95398 923 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 CEACAM5P06731 702 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 CD3EP07766 207 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 SNRPB2P08579 225 aaKnown RBP6.26□□□□□ -1.41
NIPBL-207ENST00000513819 SRFP11831 508 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 KCNJ6P48051 423 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 CYP4F3Q08477 520 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 DALRD3Q5D0E6 543 aaKnown RBP6.26□□□□□ -1.41
NIPBL-207ENST00000513819 RNF187Q5TA31 235 aaPredicted RBP6.26□□□□□ -1.41
NIPBL-207ENST00000513819 SPACA3Q8IXA5 215 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 SYNPOQ8N3V7 929 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 TCTN2Q96GX1 697 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 GPATCH3Q96I76 525 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 HSPA12BQ96MM6 686 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 METTL22Q9BUU2 404 aaPredicted RBP6.26□□□□□ -1.41
NIPBL-207ENST00000513819 NKX2-4Q9H2Z4 354 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 NCOA5Q9HCD5 579 aaKnown RBP6.26□□□□□ -1.41
NIPBL-207ENST00000513819 IFT57Q9NWB7 429 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 ZSWIM5Q9P217 1185 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 PLAGL2Q9UPG8 496 aa6.26□□□□□ -1.41
NIPBL-207ENST00000513819 BLACEA4D250 179 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 STXBP3O00186 592 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 GSC2O15499 205 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 GSNP06396 782 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 H2AFB1P0C5Y9 115 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 H2AFB2P0C5Z0 115 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 ECI1P42126 302 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 GFRA1P56159 465 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 SUMO1P63165 101 aaKnown RBP6.25□□□□□ -1.41
NIPBL-207ENST00000513819 POU4F1Q01851 419 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 PABPC4Q13310 644 aaKnown RBP eCLIP6.25□□□□□ -1.41
NIPBL-207ENST00000513819 PRSS53Q2L4Q9 553 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 CWF19L1Q69YN2 538 aaKnown RBP6.25□□□□□ -1.41
NIPBL-207ENST00000513819 DHX37Q8IY37 1157 aaKnown RBP6.25□□□□□ -1.41
NIPBL-207ENST00000513819 PLD6Q8N2A8 252 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms