RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	COA7	Q96BR5	231 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	ATG4C	Q96DT6	458 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	UPF3B	Q9BZI7	483 aa	Known RBP	10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	FBXO28	Q9NVF7	368 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	BTBD7	Q9P203	1132 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	LIMCH1	Q9UPQ0	1083 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	HPS5	Q9UPZ3	1129 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	GREB1L	Q9C091	1923 aa	Predicted RBP	10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	VWA5A	O00534	786 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	SNHG28	P0DPA3	235 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	AK2	P54819	239 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	IRF5	Q13568	498 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	RALYL	Q86SE5	291 aa	Known RBP	10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	CCAR1	Q8IX12	1150 aa	Known RBP	10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	SHCBP1	Q8NEM2	672 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	TMX3	Q96JJ7	454 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	NUP88	Q99567	741 aa	Predicted RBP	10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	SLF1	Q9BQI6	1058 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	UBAC1	Q9BSL1	405 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	SPATC1L	Q9H0A9	340 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	PORCN	Q9H237	461 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	PDRG1	Q9NUG6	133 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	GJD2	Q9UKL4	321 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	PTCH2	Q9Y6C5	1203 aa		10.25	□□□□□ -0.77
ACSF2-223	ENST00000513101	CCDC85C	A6NKD9	419 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	TMEM232	C9JQI7	657 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	ATP2A1	O14983	1001 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	PEX10	O60683	326 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	ZBED4	O75132	1171 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	SLC25A27	O95847	323 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	COPB2	P35606	906 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	SLC4A3	P48751	1232 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	FLT3LG	P49771	235 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	STAT2	P52630	851 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	PRKCZ	Q05513	592 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	COL9A3	Q14050	684 aa	Predicted RBP	10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	TOB2	Q14106	344 aa	Predicted RBP	10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	TMEM132B	Q14DG7	1078 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	SEC23A	Q15436	765 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	BTNL9	Q6UXG8	535 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	CYB5R4	Q7L1T6	521 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	PLEKHH3	Q7Z736	793 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	NBPF11	Q86T75	865 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	RIOX2	Q8IUF8	465 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	ENAH	Q8N8S7	591 aa	Predicted RBP	10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	REPS2	Q8NFH8	660 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	RAET1E	Q8TD07	263 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	PXYLP1	Q8TE99	480 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	ARMC5	Q96C12	935 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	ZKSCAN3	Q9BRR0	538 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	KAT14	Q9H8E8	782 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	CWC22	Q9HCG8	908 aa	Known RBP	10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	GABRQ	Q9UN88	632 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	TNKS	O95271	1327 aa		10.24	□□□□□ -0.77
ACSF2-223	ENST00000513101	STRN	O43815	780 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	ECM2	O94769	699 aa	Predicted RBP	10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	PDHB	P11177	359 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	XRCC5	P13010	732 aa	Known RBP	10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	STAT3	P40763	770 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	OAZ1	P54368	228 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	ZNF543	Q08ER8	600 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	SART3	Q15020	963 aa	Known RBP	10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	MORN1	Q5T089	497 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	GPATCH4	Q5T3I0	446 aa	Known RBP	10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	IFIT1B	Q5T764	474 aa	Known RBP	10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	KCTD1	Q719H9	257 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	GPR142	Q7Z601	462 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	PNMA1	Q8ND90	353 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	SOCS4	Q8WXH5	440 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	USP6NL	Q92738	828 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	KIFC2	Q96AC6	838 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	NUDT12	Q9BQG2	462 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	MROH8	Q9H579	483 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	SLC38A10	Q9HBR0	1119 aa		10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	ZNF214	Q9UL59	606 aa	Predicted RBP	10.23	□□□□□ -0.77
ACSF2-223	ENST00000513101	ERICH2	A1L162	156 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	SLC15A5	A6NIM6	579 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	IFIT3	O14879	490 aa	Known RBP	10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	ERCC3	P19447	782 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	PTPRE	P23469	700 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	GRK4	P32298	578 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	MCM5	P33992	734 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	ANTXR2	P58335	489 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	IK	Q13123	557 aa	Predicted RBP	10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	PLS1	Q14651	629 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	CCDC96	Q2M329	555 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	SLC9C1	Q4G0N8	1177 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	TRMT44	Q8IYL2	757 aa	Known RBP	10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	ABRA	Q8N0Z2	381 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	TMTC2	Q8N394	836 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	SLAIN1	Q8ND83	568 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	IGDCC4	Q8TDY8	1250 aa		10.22	□□□□□ -0.77
ACSF2-223	ENST00000513101	TMEM87B	Q96K49	555 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms