RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 GATA6Q92908 595 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 HRASLS5Q96KN8 279 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 HEXIM2Q96MH2 286 aaKnown RBP6.05□□□□□ -1.44
HTT-210ENST00000512909 SLC26A8Q96RN1 970 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 FHOD1Q9Y613 1164 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 CAPN6Q9Y6Q1 641 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 FANCD2Q9BXW9 1451 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 PRAMEF1O95521 474 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 FURINP09958 794 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 FOSL1P15407 271 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 TPP2P29144 1249 aaPredicted RBP6.04□□□□□ -1.44
HTT-210ENST00000512909 RSPO4Q2I0M5 234 aaPredicted RBP6.04□□□□□ -1.44
HTT-210ENST00000512909 ZC3H12BQ5HYM0 836 aaKnown RBP6.04□□□□□ -1.44
HTT-210ENST00000512909 MRM1Q6IN84 353 aaKnown RBP6.04□□□□□ -1.44
HTT-210ENST00000512909 SDE2Q6IQ49 451 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 GIMAP6Q6P9H5 292 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 KSR1Q8IVT5 923 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 ZNF655Q8N720 491 aaPredicted RBP6.04□□□□□ -1.44
HTT-210ENST00000512909 SYTL5Q8TDW5 730 aaPredicted RBP6.04□□□□□ -1.44
HTT-210ENST00000512909 SH3TC2Q8TF17 1288 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 ASB11Q8WXH4 323 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 UBE2FQ969M7 185 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 AARSD1Q9BTE6 412 aaKnown RBP6.04□□□□□ -1.44
HTT-210ENST00000512909 DUSP13Q9UII6 198 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 ZMYM5Q9UJ78 669 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 SNX11Q9Y5W9 270 aa6.04□□□□□ -1.44
HTT-210ENST00000512909 TOP2AP11388 1531 aaKnown RBP6.04□□□□□ -1.44
HTT-210ENST00000512909 CEP164Q9UPV0 1460 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 PRR33A8MZF0 331 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 COBLO75128 1261 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 CDC45O75419 566 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 CD3EP07766 207 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 OXCT1P55809 520 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 ZNF445P59923 1031 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 DPY19L1Q2PZI1 675 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 SPATC1Q76KD6 591 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 TMC3Q7Z5M5 1100 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 THAP5Q7Z6K1 395 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 CREG2Q8IUH2 290 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 STK11IPQ8N1F8 1099 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 NAT16Q8N8M0 369 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 DAGLBQ8NCG7 672 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 MISP3Q96FF7 219 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 RCC1LQ96I51 464 aaKnown RBP6.03□□□□□ -1.44
HTT-210ENST00000512909 HSPA12BQ96MM6 686 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 GPR62Q9BZJ7 368 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 RNF112Q9ULX5 631 aa6.03□□□□□ -1.44
HTT-210ENST00000512909 ANGEL1Q9UNK9 670 aaKnown RBP6.03□□□□□ -1.44
HTT-210ENST00000512909 MRPL42Q9Y6G3 142 aaKnown RBP6.03□□□□□ -1.44
HTT-210ENST00000512909 MRC2Q9UBG0 1479 aa6.02□□□□□ -1.44
HTT-210ENST00000512909 CBFA2T2O43439 604 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 ITGAVP06756 1048 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 SNRPB2P08579 225 aaKnown RBP6.02□□□□□ -1.45
HTT-210ENST00000512909 SEPHS1P49903 392 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 GRB10Q13322 594 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 IKZF1Q13422 519 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 SNW1Q13573 536 aaKnown RBP6.02□□□□□ -1.45
HTT-210ENST00000512909 AOC3Q16853 763 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 C2orf27AQ580R0 203 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 NKAPLQ5M9Q1 402 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 TMPRSS7Q7RTY8 843 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 SHISA5Q8N114 240 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 Q96M66 194 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 CCDC140Q96MF4 163 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 CGGBP1Q9UFW8 167 aaPredicted RBP6.02□□□□□ -1.45
HTT-210ENST00000512909 CFTRP13569 1480 aa6.02□□□□□ -1.45
HTT-210ENST00000512909 CCDC163A0A0D9SF12 145 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 PPP1R12AO14974 1030 aaPredicted RBP6.01□□□□□ -1.45
HTT-210ENST00000512909 PROCP04070 461 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 SYPP08247 313 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 NCLP19338 710 aaKnown RBP6.01□□□□□ -1.45
HTT-210ENST00000512909 PRSS36Q5K4E3 855 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 FAM214BQ7L5A3 538 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 TSPYL5Q86VY4 417 aaPredicted RBP6.01□□□□□ -1.45
HTT-210ENST00000512909 ZNF227Q86WZ6 799 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 ZDHHC13Q8IUH4 622 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 PLD6Q8N2A8 252 aaKnown RBP6.01□□□□□ -1.45
HTT-210ENST00000512909 ARHGEF39Q8N4T4 335 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 KCTD13Q8WZ19 329 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 VWCEQ96DN2 955 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 CDADC1Q9BWV3 514 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 FANCLQ9NW38 375 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 BSDC1Q9NW68 430 aaPredicted RBP6.01□□□□□ -1.45
HTT-210ENST00000512909 APEX2Q9UBZ4 518 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 EMC9Q9Y3B6 208 aa6.01□□□□□ -1.45
HTT-210ENST00000512909 TRBV23-1A0A0A0MS06 115 aa6□□□□□ -1.45
HTT-210ENST00000512909 H0Y8X5 98 aa6□□□□□ -1.45
HTT-210ENST00000512909 PRODHO43272 600 aa6□□□□□ -1.45
HTT-210ENST00000512909 DIAPH1O60610 1272 aaKnown RBP6□□□□□ -1.45
HTT-210ENST00000512909 FKTNO75072 461 aa6□□□□□ -1.45
HTT-210ENST00000512909 VAMP4O75379 141 aa6□□□□□ -1.45
HTT-210ENST00000512909 CPP00450 1065 aa6□□□□□ -1.45
HTT-210ENST00000512909 TGFB1P01137 390 aa6□□□□□ -1.45
HTT-210ENST00000512909 GSTM1P09488 218 aa6□□□□□ -1.45
HTT-210ENST00000512909 RPL10P27635 214 aaKnown RBP6□□□□□ -1.45
HTT-210ENST00000512909 ECI1P42126 302 aa6□□□□□ -1.45
HTT-210ENST00000512909 PPP2R2AP63151 447 aa6□□□□□ -1.45
HTT-210ENST00000512909 RBM10P98175 930 aaKnown RBP6□□□□□ -1.45
HTT-210ENST00000512909 EGR3Q06889 387 aa6□□□□□ -1.45
HTT-210ENST00000512909 TCEA2Q15560 299 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms