RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 TAF1P21675 1872 aa8.7□□□□□ -1.02
RFC1-215ENST00000512881 SPDYE3A6NKU9 549 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 HUNKP57058 714 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 IFIT5Q13325 482 aaKnown RBP8.69□□□□□ -1.02
RFC1-215ENST00000512881 COX20Q5RI15 118 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 DACT2Q5SW24 774 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 TMEM164Q5U3C3 297 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 TXNRD3Q86VQ6 643 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 C2orf69Q8N8R5 385 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 MXD3Q9BW11 206 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 MYOZ2Q9NPC6 264 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 GGA3Q9NZ52 723 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 ZNF804BA4D1E1 1349 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 MED23Q9ULK4 1368 aa8.69□□□□□ -1.02
RFC1-215ENST00000512881 LRRC37AA6NMS7 1700 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 GRM8O00222 908 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 MAP3K6O95382 1288 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 KLRK1P26718 216 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 KCNJ4P48050 445 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 CHRNDQ07001 517 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 EPHA10Q5JZY3 1008 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 STRIP1Q5VSL9 837 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 ANGEL2Q5VTE6 544 aaKnown RBP8.68□□□□□ -1.02
RFC1-215ENST00000512881 TTLL5Q6EMB2 1281 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 SLC4A10Q6U841 1118 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 LMBR1LQ6UX01 489 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 IGFLR1Q9H665 355 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 GBA2Q9HCG7 927 aaPredicted RBP8.68□□□□□ -1.02
RFC1-215ENST00000512881 C9orf78Q9NZ63 289 aaPredicted RBP8.68□□□□□ -1.02
RFC1-215ENST00000512881 ZNF521Q96K83 1311 aa8.68□□□□□ -1.02
RFC1-215ENST00000512881 K7ELQ4 463 aaPredicted RBP8.67□□□□□ -1.02
RFC1-215ENST00000512881 SNAP23O00161 211 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 OPLAHO14841 1288 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 LILRB5O75023 590 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 TAF5LO75529 589 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 ALDH1L1O75891 902 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 CCDC57Q2TAC2 916 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 NBPF9Q3BBW0 867 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 PRRT3Q5FWE3 981 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 RGMBQ6NW40 437 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 KRT25Q7Z3Z0 450 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 CDCA5Q96FF9 252 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 IFT43Q96FT9 208 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 SRCIN1Q9C0H9 1055 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 SAP130Q9H0E3 1048 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 JPH1Q9HDC5 661 aaPredicted RBP8.67□□□□□ -1.02
RFC1-215ENST00000512881 C11orf16Q9NQ32 467 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 CXXC1Q9P0U4 656 aaPredicted RBP8.67□□□□□ -1.02
RFC1-215ENST00000512881 USP20Q9Y2K6 914 aa8.67□□□□□ -1.02
RFC1-215ENST00000512881 ZNF609O15014 1411 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 MYO3BQ8WXR4 1341 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 E9PSI1 815 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 CA12O43570 354 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 FURINP09958 794 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 MMP14P50281 582 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 ZNF157P51786 506 aaPredicted RBP8.66□□□□□ -1.02
RFC1-215ENST00000512881 NOGQ13253 232 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 TAF7LQ5H9L4 462 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 FAM26DQ5JW98 314 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 PSAPL1Q6NUJ1 521 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 LDHAL6AQ6ZMR3 332 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 C15orf52Q6ZUT6 534 aaKnown RBP8.66□□□□□ -1.02
RFC1-215ENST00000512881 TREML1Q86YW5 311 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 NUDT8Q8WV74 236 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 COL26A1Q96A83 441 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 PBXIP1Q96AQ6 731 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 CD209Q9NNX6 404 aa8.66□□□□□ -1.02
RFC1-215ENST00000512881 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
RFC1-215ENST00000512881 SCAF8Q9UPN6 1271 aaKnown RBP8.66□□□□□ -1.02
RFC1-215ENST00000512881 PITPNM2Q9BZ72 1349 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 IRS2Q9Y4H2 1338 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 FAM155AB1AL88 458 aaPredicted RBP8.65□□□□□ -1.02
RFC1-215ENST00000512881 WNT10BO00744 389 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 PLIN1O60240 522 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 TARSP26639 723 aaKnown RBP8.65□□□□□ -1.02
RFC1-215ENST00000512881 AFF1P51825 1210 aaKnown RBP8.65□□□□□ -1.02
RFC1-215ENST00000512881 SLFN5Q08AF3 891 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 PRAMEF18Q5VWM3 479 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 CAPN12Q6ZSI9 719 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 DHX32Q7L7V1 743 aaKnown RBP8.65□□□□□ -1.02
RFC1-215ENST00000512881 KIAA0825Q8IV33 1275 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 ETFBKMTQ8IXQ9 262 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 KAZALD1Q96I82 304 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 SUCLG2Q96I99 432 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 CNNM1Q9NRU3 951 aa8.65□□□□□ -1.02
RFC1-215ENST00000512881 ZBTB42B2RXF5 422 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 TNFRSF10BO14763 440 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 SASH3O75995 380 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 NBPF7P0C2Y1 421 aaPredicted RBP8.64□□□□□ -1.03
RFC1-215ENST00000512881 RARAP10276 462 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 IL1R1P14778 569 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 FKBP1BP68106 108 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 GPLD1P80108 840 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 KIF23Q02241 960 aaPredicted RBP8.64□□□□□ -1.03
RFC1-215ENST00000512881 C16orf46Q6P387 395 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 ZNF804AQ7Z570 1209 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 SSH1Q8WYL5 1049 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 CLP1Q92989 425 aaKnown RBP8.64□□□□□ -1.03
RFC1-215ENST00000512881 CCDC97Q96F63 343 aaPredicted RBP8.64□□□□□ -1.03
RFC1-215ENST00000512881 LPIN3Q9BQK8 851 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms