RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 FERMT2Q96AC1 680 aa17.36■□□□□ 0.37
LETM1-207ENST00000512669 TRIM43Q96BQ3 446 aaPredicted RBP17.36■□□□□ 0.37
LETM1-207ENST00000512669 TSEN34Q9BSV6 310 aaKnown RBP17.36■□□□□ 0.37
LETM1-207ENST00000512669 ARPP21Q9UBL0 812 aaPredicted RBP17.36■□□□□ 0.37
LETM1-207ENST00000512669 CNPY2Q9Y2B0 182 aa17.36■□□□□ 0.37
LETM1-207ENST00000512669 COL11A1P12107 1806 aaPredicted RBP17.35■□□□□ 0.37
LETM1-207ENST00000512669 PATL2C9JE40 543 aaKnown RBP17.35■□□□□ 0.37
LETM1-207ENST00000512669 KIAA0355O15063 1070 aa17.35■□□□□ 0.37
LETM1-207ENST00000512669 STAT3P40763 770 aa17.35■□□□□ 0.37
LETM1-207ENST00000512669 TLE2Q04725 743 aa17.35■□□□□ 0.37
LETM1-207ENST00000512669 STK11IPQ8N1F8 1099 aa17.35■□□□□ 0.37
LETM1-207ENST00000512669 FSD1Q9BTV5 496 aa17.35■□□□□ 0.37
LETM1-207ENST00000512669 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
LETM1-207ENST00000512669 PPP1R9AQ9ULJ8 1098 aa17.35■□□□□ 0.37
LETM1-207ENST00000512669 LAMA2P24043 3122 aaKnown RBP17.35■□□□□ 0.37
LETM1-207ENST00000512669 SMCHD1A6NHR9 2005 aa17.35■□□□□ 0.37
LETM1-207ENST00000512669 MINDY4BA8MYZ0 360 aa17.34■□□□□ 0.37
LETM1-207ENST00000512669 VWA5AO00534 786 aa17.34■□□□□ 0.37
LETM1-207ENST00000512669 RAG1P15918 1043 aa17.34■□□□□ 0.37
LETM1-207ENST00000512669 RASA1P20936 1047 aa17.34■□□□□ 0.37
LETM1-207ENST00000512669 ZNF792Q3KQV3 632 aa17.34■□□□□ 0.37
LETM1-207ENST00000512669 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
LETM1-207ENST00000512669 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
LETM1-207ENST00000512669 IFNL3Q8IZI9 196 aa17.34■□□□□ 0.37
LETM1-207ENST00000512669 NUP133Q8WUM0 1156 aa17.34■□□□□ 0.37
LETM1-207ENST00000512669 RNPC3Q96LT9 517 aaKnown RBP17.34■□□□□ 0.37
LETM1-207ENST00000512669 TOX2Q96NM4 488 aa17.34■□□□□ 0.37
LETM1-207ENST00000512669 CDH23Q9H251 3354 aa17.34■□□□□ 0.37
LETM1-207ENST00000512669 SYNGAP1Q96PV0 1343 aa17.33■□□□□ 0.36
LETM1-207ENST00000512669 A0A1W2PQ45 241 aaPredicted RBP17.33■□□□□ 0.36
LETM1-207ENST00000512669 A0A1W2PQY0 241 aa17.33■□□□□ 0.36
LETM1-207ENST00000512669 MOXD2PA6NHM9 499 aa17.33■□□□□ 0.36
LETM1-207ENST00000512669 EEF2P13639 858 aaKnown RBP17.33■□□□□ 0.36
LETM1-207ENST00000512669 FOSL2P15408 326 aa17.33■□□□□ 0.36
LETM1-207ENST00000512669 FPGSQ05932 587 aa17.33■□□□□ 0.36
LETM1-207ENST00000512669 B4GALNT3Q6L9W6 998 aa17.33■□□□□ 0.36
LETM1-207ENST00000512669 SH3RF1Q7Z6J0 888 aa17.33■□□□□ 0.36
LETM1-207ENST00000512669 RWDD1Q9H446 243 aaPredicted RBP17.33■□□□□ 0.36
LETM1-207ENST00000512669 ZNF214Q9UL59 606 aaPredicted RBP17.33■□□□□ 0.36
LETM1-207ENST00000512669 VCANP13611 3396 aa17.32■□□□□ 0.36
LETM1-207ENST00000512669 MROH7Q68CQ1 1323 aa17.32■□□□□ 0.36
LETM1-207ENST00000512669 DCDC2CA8MYV0 355 aa17.32■□□□□ 0.36
LETM1-207ENST00000512669 PGK1P00558 417 aa17.32■□□□□ 0.36
LETM1-207ENST00000512669 PGK2P07205 417 aa17.32■□□□□ 0.36
LETM1-207ENST00000512669 GNAT2P19087 354 aa17.32■□□□□ 0.36
LETM1-207ENST00000512669 ANKRD33Q7Z3H0 272 aa17.32■□□□□ 0.36
LETM1-207ENST00000512669 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
LETM1-207ENST00000512669 TEX13BQ9BXU2 312 aa17.32■□□□□ 0.36
LETM1-207ENST00000512669 TTYH1Q9H313 450 aaPredicted RBP17.32■□□□□ 0.36
LETM1-207ENST00000512669 PQBP1O60828 265 aaKnown RBP17.31■□□□□ 0.36
LETM1-207ENST00000512669 APPP05067 770 aa17.31■□□□□ 0.36
LETM1-207ENST00000512669 ZNF865P0CJ78 1059 aaPredicted RBP17.31■□□□□ 0.36
LETM1-207ENST00000512669 NUCB1Q02818 461 aa17.31■□□□□ 0.36
LETM1-207ENST00000512669 LRRFIP1Q32MZ4 808 aaKnown RBP17.31■□□□□ 0.36
LETM1-207ENST00000512669 CCDC174Q6PII3 467 aa17.31■□□□□ 0.36
LETM1-207ENST00000512669 MYLIPQ8WY64 445 aa17.31■□□□□ 0.36
LETM1-207ENST00000512669 EVI5LQ96CN4 794 aa17.31■□□□□ 0.36
LETM1-207ENST00000512669 SLF1Q9BQI6 1058 aa17.31■□□□□ 0.36
LETM1-207ENST00000512669 STARD7Q9NQZ5 370 aa17.31■□□□□ 0.36
LETM1-207ENST00000512669 TMEM39AQ9NV64 488 aa17.31■□□□□ 0.36
LETM1-207ENST00000512669 FBXO28Q9NVF7 368 aa17.31■□□□□ 0.36
LETM1-207ENST00000512669 FAM184BQ9ULE4 1060 aa17.31■□□□□ 0.36
LETM1-207ENST00000512669 IGKV6D-41A0A0C4DH26 115 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 RAD21O60216 631 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 ADAMTS4O75173 837 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 PRDM1O75626 825 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 TDO2P48775 406 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 FAM83BQ5T0W9 1011 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 VPS53Q5VIR6 699 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 MAMDC4Q6UXC1 1216 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 ZNF467Q7Z7K2 595 aaPredicted RBP17.3■□□□□ 0.36
LETM1-207ENST00000512669 CHD1LQ86WJ1 897 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 PLEKHM2Q8IWE5 1019 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 REPS2Q8NFH8 660 aa17.3■□□□□ 0.36
LETM1-207ENST00000512669 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
LETM1-207ENST00000512669 GREB1LQ9C091 1923 aaPredicted RBP17.29■□□□□ 0.36
LETM1-207ENST00000512669 SYNRGQ9UMZ2 1314 aa17.29■□□□□ 0.36
LETM1-207ENST00000512669 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.29■□□□□ 0.36
LETM1-207ENST00000512669 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.29■□□□□ 0.36
LETM1-207ENST00000512669 ATP2A1O14983 1001 aa17.29■□□□□ 0.36
LETM1-207ENST00000512669 CST5P28325 142 aaPredicted RBP17.29■□□□□ 0.36
LETM1-207ENST00000512669 ACLYP53396 1101 aa17.29■□□□□ 0.36
LETM1-207ENST00000512669 PCSK9Q8NBP7 692 aaKnown RBP17.29■□□□□ 0.36
LETM1-207ENST00000512669 DDX11Q96FC9 970 aa17.29■□□□□ 0.36
LETM1-207ENST00000512669 FAM227BQ96M60 508 aa17.29■□□□□ 0.36
LETM1-207ENST00000512669 MKNK2Q9HBH9 465 aa17.29■□□□□ 0.36
LETM1-207ENST00000512669 SPC25Q9HBM1 224 aa17.29■□□□□ 0.36
LETM1-207ENST00000512669 INCENPQ9NQS7 918 aa17.29■□□□□ 0.36
LETM1-207ENST00000512669 TTC28Q96AY4 2481 aa17.28■□□□□ 0.36
LETM1-207ENST00000512669 ELP1O95163 1332 aa17.28■□□□□ 0.36
LETM1-207ENST00000512669 DUSP11O75319 330 aaKnown RBP17.28■□□□□ 0.36
LETM1-207ENST00000512669 TAL1P17542 331 aaPredicted RBP17.28■□□□□ 0.36
LETM1-207ENST00000512669 ITGB8P26012 769 aa17.28■□□□□ 0.36
LETM1-207ENST00000512669 SNRNP48Q6IEG0 339 aaKnown RBP17.28■□□□□ 0.36
LETM1-207ENST00000512669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.28■□□□□ 0.36
LETM1-207ENST00000512669 PRPF38AQ8NAV1 312 aaKnown RBP17.28■□□□□ 0.36
LETM1-207ENST00000512669 KLHDC9Q8NEP7 349 aa17.28■□□□□ 0.36
LETM1-207ENST00000512669 GLT1D1Q96MS3 346 aa17.28■□□□□ 0.36
LETM1-207ENST00000512669 ZNF287Q9HBT7 754 aa17.28■□□□□ 0.36
LETM1-207ENST00000512669 NYAP2Q9P242 653 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms