RNA–Protein interactions for RNA: ENST00000512303.1

TRIO-219, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-219ENST00000512303 RELBQ01201 579 aa8.39□□□□□ -1.07
TRIO-219ENST00000512303 IFIT5Q13325 482 aaKnown RBP8.39□□□□□ -1.07
TRIO-219ENST00000512303 C8orf34Q49A92 452 aa8.39□□□□□ -1.07
TRIO-219ENST00000512303 MRPL14Q6P1L8 145 aaKnown RBP8.39□□□□□ -1.07
TRIO-219ENST00000512303 CASC1Q6TDU7 716 aa8.39□□□□□ -1.07
TRIO-219ENST00000512303 TICAM2Q86XR7 235 aa8.39□□□□□ -1.07
TRIO-219ENST00000512303 MAFAQ8NHW3 353 aaPredicted RBP8.39□□□□□ -1.07
TRIO-219ENST00000512303 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRIO-219ENST00000512303 PRKAG2Q9UGJ0 569 aa8.39□□□□□ -1.07
TRIO-219ENST00000512303 ZMYND8Q9ULU4 1186 aaPredicted RBP8.39□□□□□ -1.07
TRIO-219ENST00000512303 LRRFIP2Q9Y608 721 aaKnown RBP8.39□□□□□ -1.07
TRIO-219ENST00000512303 A0A1W2PRU2 124 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 H7C1W4 665 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 SRGAP3O43295 1099 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 EPB41L2O43491 1005 aaKnown RBP8.38□□□□□ -1.07
TRIO-219ENST00000512303 ATG7O95352 703 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 CSF1RP07333 972 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 CTGFP29279 349 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 CRKP46108 304 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 PTK7Q13308 1070 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 CRTC2Q53ET0 693 aaPredicted RBP8.38□□□□□ -1.07
TRIO-219ENST00000512303 NOL9Q5SY16 702 aaKnown RBP8.38□□□□□ -1.07
TRIO-219ENST00000512303 CCDC102BQ68D86 513 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 VPS37DQ86XT2 251 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 LINC00528Q8N1L1 170 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 ZKSCAN4Q969J2 545 aaPredicted RBP8.38□□□□□ -1.07
TRIO-219ENST00000512303 GUCD1Q96NT3 240 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 LNPKQ9C0E8 428 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 ZNF395Q9H8N7 513 aaPredicted RBP8.38□□□□□ -1.07
TRIO-219ENST00000512303 VCANP13611 3396 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 TAF1P21675 1872 aa8.38□□□□□ -1.07
TRIO-219ENST00000512303 IGKV5-2P06315 115 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 NBPF7P0C2Y1 421 aaPredicted RBP8.37□□□□□ -1.07
TRIO-219ENST00000512303 KLRK1P26718 216 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 HIBADHP31937 336 aaKnown RBP8.37□□□□□ -1.07
TRIO-219ENST00000512303 PABPC4Q13310 644 aaKnown RBP eCLIP8.37□□□□□ -1.07
TRIO-219ENST00000512303 UBE4AQ14139 1066 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 FAM110CQ1W6H9 321 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 RABL6Q3YEC7 729 aaPredicted RBP8.37□□□□□ -1.07
TRIO-219ENST00000512303 TAF7LQ5H9L4 462 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 UBE3BQ7Z3V4 1068 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 CLASRPQ8N2M8 674 aaKnown RBP8.37□□□□□ -1.07
TRIO-219ENST00000512303 TDRD7Q8NHU6 1098 aaKnown RBP8.37□□□□□ -1.07
TRIO-219ENST00000512303 GPATCH3Q96I76 525 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 ZNF594Q96JF6 807 aaPredicted RBP8.37□□□□□ -1.07
TRIO-219ENST00000512303 ZDHHC15Q96MV8 337 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 PICK1Q9NRD5 415 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 OGDHLQ9ULD0 1010 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 PCDHAC2Q9Y5I4 1007 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 COL4A1P02462 1669 aa8.37□□□□□ -1.07
TRIO-219ENST00000512303 TTC41PQ6P2S7 1318 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L15C9J2P7 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L10C9JJH3 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L13C9JLJ4 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L12C9JPN9 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L11C9JVI0 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L21D6R901 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L18D6R9N7 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L22D6RA61 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L17D6RBQ6 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L19D6RCP7 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L20D6RJB6 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 ERC2O15083 957 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 SPINT1O43278 529 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 FRAT2O75474 233 aaPredicted RBP8.36□□□□□ -1.07
TRIO-219ENST00000512303 SURF6O75683 361 aaKnown RBP8.36□□□□□ -1.07
TRIO-219ENST00000512303 BMP2P12643 396 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 ELNP15502 786 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 SYN1P17600 705 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 GCLCP48506 637 aaPredicted RBP8.36□□□□□ -1.07
TRIO-219ENST00000512303 USP17L24Q0WX57 530 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 G3BP1Q13283 466 aaKnown RBP eCLIP8.36□□□□□ -1.07
TRIO-219ENST00000512303 CCDC57Q2TAC2 916 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 CAVIN4Q5BKX8 364 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 TRIM46Q7Z4K8 759 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 SIX5Q8N196 739 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 TPCN2Q8NHX9 752 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 XAGE2Q96GT9 111 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 ARHGEF10LQ9HCE6 1279 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 ATP13A2Q9NQ11 1180 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 COPRSQ9NQ92 184 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 DACH1Q9UI36 760 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 ZNF112Q9UJU3 913 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 GABRQQ9UN88 632 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 KIAA1024Q9UPX6 916 aa8.36□□□□□ -1.07
TRIO-219ENST00000512303 A0A0G2JLL6 359 aaPredicted RBP8.35□□□□□ -1.07
TRIO-219ENST00000512303 PNMA6EA0A0J9YXQ4 647 aa8.35□□□□□ -1.07
TRIO-219ENST00000512303 CDC45O75419 566 aa8.35□□□□□ -1.07
TRIO-219ENST00000512303 STAU1O95793 577 aaKnown RBP8.35□□□□□ -1.07
TRIO-219ENST00000512303 BMP1P13497 986 aa8.35□□□□□ -1.07
TRIO-219ENST00000512303 FOSL2P15408 326 aa8.35□□□□□ -1.07
TRIO-219ENST00000512303 GDF10P55107 478 aa8.35□□□□□ -1.07
TRIO-219ENST00000512303 SMAD3P84022 425 aaKnown RBP8.35□□□□□ -1.07
TRIO-219ENST00000512303 CLN3Q13286 438 aa8.35□□□□□ -1.07
TRIO-219ENST00000512303 ELOAQ14241 798 aaKnown RBP8.35□□□□□ -1.07
TRIO-219ENST00000512303 CWF19L2Q2TBE0 894 aaKnown RBP8.35□□□□□ -1.07
TRIO-219ENST00000512303 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
TRIO-219ENST00000512303 TTC22Q5TAA0 569 aa8.35□□□□□ -1.07
TRIO-219ENST00000512303 HHIPL2Q6UWX4 724 aa8.35□□□□□ -1.07
TRIO-219ENST00000512303 LDHAL6AQ6ZMR3 332 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms