RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 STAG1Q8WVM7 1258 aa15.71■□□□□ 0.11
RNF4-215ENST00000511843 CRISPLD2Q9H0B8 497 aa15.71■□□□□ 0.11
RNF4-215ENST00000511843 RAVER2Q9HCJ3 691 aaKnown RBP15.71■□□□□ 0.11
RNF4-215ENST00000511843 FEM1BQ9UK73 627 aa15.71■□□□□ 0.11
RNF4-215ENST00000511843 RIPK3Q9Y572 518 aa15.71■□□□□ 0.11
RNF4-215ENST00000511843 ZNF213O14771 459 aa15.7■□□□□ 0.1
RNF4-215ENST00000511843 HOXC6P09630 235 aa15.7■□□□□ 0.1
RNF4-215ENST00000511843 CHMLP26374 656 aa15.7■□□□□ 0.1
RNF4-215ENST00000511843 SLC1A4P43007 532 aa15.7■□□□□ 0.1
RNF4-215ENST00000511843 IKQ13123 557 aaPredicted RBP15.7■□□□□ 0.1
RNF4-215ENST00000511843 PRPF38BQ5VTL8 546 aaKnown RBP15.7■□□□□ 0.1
RNF4-215ENST00000511843 SNRNP48Q6IEG0 339 aaKnown RBP15.7■□□□□ 0.1
RNF4-215ENST00000511843 TRMT44Q8IYL2 757 aaKnown RBP15.7■□□□□ 0.1
RNF4-215ENST00000511843 TRPV1Q8NER1 839 aa15.7■□□□□ 0.1
RNF4-215ENST00000511843 GMCL1Q96IK5 515 aa15.7■□□□□ 0.1
RNF4-215ENST00000511843 MMP19Q99542 508 aa15.7■□□□□ 0.1
RNF4-215ENST00000511843 ZKSCAN3Q9BRR0 538 aa15.7■□□□□ 0.1
RNF4-215ENST00000511843 SYNPO2Q9UMS6 1093 aa15.7■□□□□ 0.1
RNF4-215ENST00000511843 STRNO43815 780 aa15.69■□□□□ 0.1
RNF4-215ENST00000511843 SLC25A27O95847 323 aa15.69■□□□□ 0.1
RNF4-215ENST00000511843 FCER1AP12319 257 aa15.69■□□□□ 0.1
RNF4-215ENST00000511843 MFSD14CQ5VZR4 134 aa15.69■□□□□ 0.1
RNF4-215ENST00000511843 TMEM47Q9BQJ4 181 aa15.69■□□□□ 0.1
RNF4-215ENST00000511843 DSCC1Q9BVC3 393 aa15.69■□□□□ 0.1
RNF4-215ENST00000511843 SLC38A10Q9HBR0 1119 aa15.69■□□□□ 0.1
RNF4-215ENST00000511843 FRMPD2Q68DX3 1309 aaPredicted RBP15.68■□□□□ 0.1
RNF4-215ENST00000511843 LCTP09848 1927 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 MYH6P13533 1939 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 B4E1Z4 1266 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 ZBED4O75132 1171 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 TAL1P17542 331 aaPredicted RBP15.68■□□□□ 0.1
RNF4-215ENST00000511843 CNGA1P29973 690 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 NOVP48745 357 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 STAT2P52630 851 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 PTH1RQ03431 593 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 CCDC96Q2M329 555 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 TTBK2Q6IQ55 1244 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 RCSD1Q6JBY9 416 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 PAWRQ96IZ0 340 aaKnown RBP15.68■□□□□ 0.1
RNF4-215ENST00000511843 TEX13BQ9BXU2 312 aa15.68■□□□□ 0.1
RNF4-215ENST00000511843 CTDP1Q9Y5B0 961 aaPredicted RBP15.68■□□□□ 0.1
RNF4-215ENST00000511843 KDM4AO75164 1064 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 IGHA2P01877 340 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 SLC16A2P36021 539 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
RNF4-215ENST00000511843 KCTD2Q14681 263 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 PPP4R3BQ5MIZ7 849 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 PRAMEF19Q5SWL8 479 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 ANO1Q5XXA6 986 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 ABRAQ8N0Z2 381 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 MAML3Q96JK9 1138 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 RNF41Q9H4P4 317 aaPredicted RBP15.67■□□□□ 0.1
RNF4-215ENST00000511843 GPCPD1Q9NPB8 672 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 HOMER2Q9NSB8 354 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 DNAH12Q6ZR08 3092 aa15.67■□□□□ 0.1
RNF4-215ENST00000511843 TOP1P11387 765 aaKnown RBP15.66■□□□□ 0.1
RNF4-215ENST00000511843 CYBAP13498 195 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 IMMTQ16891 758 aaKnown RBP15.66■□□□□ 0.1
RNF4-215ENST00000511843 OLFML2BQ68BL8 750 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 LHX8Q68G74 356 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 CCDC174Q6PII3 467 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 ESR2Q92731 530 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 DPF3Q92784 378 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 AGBL1Q96MI9 1066 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 TCP11L1Q9NUJ3 509 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 OGDHLQ9ULD0 1010 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 PRR12Q9ULL5 1215 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 ZNF536O15090 1300 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 RAD50Q92878 1312 aa15.66■□□□□ 0.1
RNF4-215ENST00000511843 ATP2A1O14983 1001 aa15.65■□□□□ 0.1
RNF4-215ENST00000511843 PCP11498 1178 aaKnown RBP15.65■□□□□ 0.1
RNF4-215ENST00000511843 ZNF792Q3KQV3 632 aa15.65■□□□□ 0.1
RNF4-215ENST00000511843 CENPQQ7L2Z9 268 aaPredicted RBP15.65■□□□□ 0.1
RNF4-215ENST00000511843 FAM160B2Q86V87 743 aa15.65■□□□□ 0.1
RNF4-215ENST00000511843 CHURC1Q8WUH1 139 aa15.65■□□□□ 0.1
RNF4-215ENST00000511843 DCAF4Q8WV16 495 aa15.65■□□□□ 0.1
RNF4-215ENST00000511843 CTNNA3Q9UI47 895 aa15.65■□□□□ 0.1
RNF4-215ENST00000511843 TAF6LQ9Y6J9 622 aa15.65■□□□□ 0.1
RNF4-215ENST00000511843 H0YGN5 161 aa15.64■□□□□ 0.09
RNF4-215ENST00000511843 PDHBP11177 359 aa15.64■□□□□ 0.09
RNF4-215ENST00000511843 COPB2P35606 906 aa15.64■□□□□ 0.09
RNF4-215ENST00000511843 NECAB2Q7Z6G3 386 aa15.64■□□□□ 0.09
RNF4-215ENST00000511843 RUFY2Q8WXA3 655 aa15.64■□□□□ 0.09
RNF4-215ENST00000511843 DDX11Q96FC9 970 aa15.64■□□□□ 0.09
RNF4-215ENST00000511843 SLC5A4Q9NY91 659 aa15.64■□□□□ 0.09
RNF4-215ENST00000511843 ZSWIM5Q9P217 1185 aa15.64■□□□□ 0.09
RNF4-215ENST00000511843 DDX20Q9UHI6 824 aaKnown RBP15.64■□□□□ 0.09
RNF4-215ENST00000511843 LRRC37A2A6NM11 1700 aa15.63■□□□□ 0.09
RNF4-215ENST00000511843 SGSM2O43147 1006 aa15.63■□□□□ 0.09
RNF4-215ENST00000511843 GOLGA8HP0CJ92 632 aa15.63■□□□□ 0.09
RNF4-215ENST00000511843 ALAS1P13196 640 aa15.63■□□□□ 0.09
RNF4-215ENST00000511843 HTATIP2Q9BUP3 242 aa15.63■□□□□ 0.09
RNF4-215ENST00000511843 CPVLQ9H3G5 476 aa15.63■□□□□ 0.09
RNF4-215ENST00000511843 RNF146Q9NTX7 359 aa15.63■□□□□ 0.09
RNF4-215ENST00000511843 PCDH10Q9P2E7 1040 aa15.63■□□□□ 0.09
RNF4-215ENST00000511843 CEP290O15078 2479 aa15.63■□□□□ 0.09
RNF4-215ENST00000511843 PFASO15067 1338 aa15.63■□□□□ 0.09
RNF4-215ENST00000511843 DNAJC25-GNG10A0A024R161 153 aa15.62■□□□□ 0.09
RNF4-215ENST00000511843 PLA2G6O60733 806 aa15.62■□□□□ 0.09
RNF4-215ENST00000511843 CYP21A2P08686 494 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms