RNA–Protein interactions for RNA: ENST00000511459.1

APBB3-217, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-217	ENST00000511459	PLA2G6	O60733	806 aa		13.63	□□□□□ -0.23
APBB3-217	ENST00000511459	GJA5	P36382	358 aa		13.63	□□□□□ -0.23
APBB3-217	ENST00000511459	NFKBIB	Q15653	356 aa		13.63	□□□□□ -0.23
APBB3-217	ENST00000511459	PFKFB3	Q16875	520 aa	Predicted RBP	13.63	□□□□□ -0.23
APBB3-217	ENST00000511459	SYDE2	Q5VT97	1194 aa		13.63	□□□□□ -0.23
APBB3-217	ENST00000511459	MTMR8	Q96EF0	704 aa		13.63	□□□□□ -0.23
APBB3-217	ENST00000511459	RRP36	Q96EU6	259 aa	Known RBP	13.63	□□□□□ -0.23
APBB3-217	ENST00000511459	PIGS	Q96S52	555 aa		13.63	□□□□□ -0.23
APBB3-217	ENST00000511459	TMOD4	Q9NZQ9	345 aa		13.63	□□□□□ -0.23
APBB3-217	ENST00000511459	RBM27	Q9P2N5	1060 aa	Known RBP	13.63	□□□□□ -0.23
APBB3-217	ENST00000511459	FEM1B	Q9UK73	627 aa		13.63	□□□□□ -0.23
APBB3-217	ENST00000511459		A0A0G2JLL6	359 aa	Predicted RBP	13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	STX6	O43752	255 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	SCG2	P13521	617 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	STAT2	P52630	851 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	FOSB	P53539	338 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	HUNK	P57058	714 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	IK	Q13123	557 aa	Predicted RBP	13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	FAM160B2	Q86V87	743 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	HOMER1	Q86YM7	354 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	CHURC1	Q8WUH1	139 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	TNPO1	Q92973	898 aa	Known RBP	13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	WNK4	Q96J92	1243 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	C8orf76	Q96K31	380 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	GJB4	Q9NTQ9	266 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	FBXO28	Q9NVF7	368 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	PRR12	Q9ULL5	1215 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	MTMR6	Q9Y217	621 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	ZDHHC9	Q9Y397	364 aa		13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.62	□□□□□ -0.23
APBB3-217	ENST00000511459	PNMA6F	A0A0J9YX94	578 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459		H3BQV1	296 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	BRD1	O95696	1058 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	FSTL1	Q12841	308 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	NBR1	Q14596	966 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	IFFO2	Q5TF58	517 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	OTUD7B	Q6GQQ9	843 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	SAPCD2	Q86UD0	394 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	RGS22	Q8NE09	1264 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	FBXO18	Q8NFZ0	1043 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	KIFC2	Q96AC6	838 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	SHISA4	Q96DD7	197 aa		13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	SEC63	Q9UGP8	760 aa	Known RBP	13.61	□□□□□ -0.23
APBB3-217	ENST00000511459	VPS37C	A5D8V6	355 aa	Predicted RBP	13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	ZBTB5	O15062	677 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	ZSCAN22	P10073	491 aa	Predicted RBP	13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	SNAP25	P60880	206 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	GUCY1B3	Q02153	619 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	SNAPC2	Q13487	334 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	MOGS	Q13724	837 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	CDC37	Q16543	378 aa	Predicted RBP	13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	SPRYD7	Q5W111	196 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	KRT40	Q6A162	431 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	CATSPERG	Q6ZRH7	1159 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	PRPF38A	Q8NAV1	312 aa	Known RBP	13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	SLF1	Q9BQI6	1058 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	TANGO6	Q9C0B7	1094 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	VPS54	Q9P1Q0	977 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	MYH6	P13533	1939 aa		13.6	□□□□□ -0.23
APBB3-217	ENST00000511459	PTPRF	P10586	1907 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	USP17L15	C9J2P7	530 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	USP17L13	C9JLJ4	530 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	USP17L11	C9JVI0	530 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	USP17L18	D6R9N7	530 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	USP17L22	D6RA61	530 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	USP17L17	D6RBQ6	530 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	USP17L19	D6RCP7	530 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	USP17L20	D6RJB6	530 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	PPP1R11	O60927	126 aa	Predicted RBP	13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	FLOT1	O75955	427 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	USP17L24	Q0WX57	530 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	TRIM29	Q14134	588 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	QRICH1	Q2TAL8	776 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	TREML2	Q5T2D2	321 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	WWC2	Q6AWC2	1192 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	GADL1	Q6ZQY3	521 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	FASTKD5	Q7L8L6	764 aa	Known RBP	13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	HEATR3	Q7Z4Q2	680 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	RANBP17	Q9H2T7	1088 aa	Known RBP	13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	BARHL2	Q9NY43	387 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	PPP1R9A	Q9ULJ8	1098 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	KCNJ14	Q9UNX9	436 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	TLL2	Q9Y6L7	1015 aa		13.59	□□□□□ -0.23
APBB3-217	ENST00000511459	TMEM88B	A6NKF7	163 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	STXBP3	O00186	592 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	ZBTB48	P10074	688 aa	Predicted RBP	13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	XBP1	P17861	261 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	HOXA7	P31268	230 aa	Predicted RBP	13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	MCM4	P33991	863 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	ZNF157	P51786	506 aa	Predicted RBP	13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	GTF2A2	P52657	109 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	MKRN3	Q13064	507 aa	Known RBP	13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	COG2	Q14746	738 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	CSPP1	Q1MSJ5	1256 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	GPAT2	Q6NUI2	795 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms