RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 CAMK2GQ13555 558 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-208ENST00000511439 OXR1Q8N573 874 aa5.71□□□□□ -1.5
TOPBP1-208ENST00000511439 DHX38Q92620 1227 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-208ENST00000511439 SLC26A8Q96RN1 970 aa5.71□□□□□ -1.5
TOPBP1-208ENST00000511439 DUSP13Q9UII6 198 aa5.71□□□□□ -1.5
TOPBP1-208ENST00000511439 C3P01024 1663 aa5.71□□□□□ -1.5
TOPBP1-208ENST00000511439 RAPGEF2Q9Y4G8 1499 aa5.71□□□□□ -1.5
TOPBP1-208ENST00000511439 DNAJC25-GNG10A0A024R161 153 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 C1QTNF9P0C862 333 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 PLCG1P19174 1290 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 HK2P52789 917 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 FAM160A1Q05DH4 1040 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 GAB4Q2WGN9 574 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 RALGPS1Q5JS13 557 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 TMEM201Q5SNT2 666 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 FBXL19Q6PCT2 694 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 ZNF654Q8IZM8 581 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 LILRA2Q8N149 483 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 FAM13CQ8NE31 585 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 PDZD8Q8NEN9 1154 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 RNF141Q8WVD5 230 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 JARID2Q92833 1246 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 Q96M66 194 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 TGIF2Q9GZN2 237 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 DUSP15Q9H1R2 295 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 ADAMTS1Q9UHI8 967 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 RAPGEF6Q8TEU7 1601 aa5.7□□□□□ -1.5
TOPBP1-208ENST00000511439 CFAP74Q9C0B2 1584 aa5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 FAM221AA4D161 298 aa5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 MED14OSP0DP75 135 aa5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 SRFP11831 508 aa5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 ERCC5P28715 1186 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 ZNF772Q68DY9 489 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 BNC2Q6ZN30 1099 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 TSPYL5Q86VY4 417 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 SLFN12Q8IYM2 578 aa5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 DTWD2Q8NBA8 298 aa5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 GOLM1Q8NBJ4 401 aa5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 ZNF296Q8WUU4 475 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 GATAD2BQ8WXI9 593 aa5.69□□□□□ -1.5
TOPBP1-208ENST00000511439 NPATQ14207 1427 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 FITM1A5D6W6 292 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 TCAF2A6NFQ2 919 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 GREM1O60565 184 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 ZSCAN22P10073 491 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 GLDCP23378 1020 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 LTKP29376 864 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 EGR3Q06889 387 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 SNAP47Q5SQN1 464 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 C1QL4Q86Z23 238 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 SPON2Q9BUD6 331 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 ADAMTS10Q9H324 1103 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 SUPT16HQ9Y5B9 1047 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 ATP10AO60312 1499 aa5.68□□□□□ -1.5
TOPBP1-208ENST00000511439 ZNF142P52746 1687 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 CILPO75339 1184 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 F13A1P00488 732 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 KRT1P04264 644 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 TNNI2P48788 182 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 CHRNEQ04844 493 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 DUSP4Q13115 394 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 NR0B2Q15466 257 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 KCNA10Q16322 511 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 CIAPIN1Q6FI81 312 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 FAM196AQ6ZSG2 479 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 IRF2BP1Q8IU81 584 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 SPPL2CQ8IUH8 684 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 PPP1R13LQ8WUF5 828 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 ASPNQ9BXN1 380 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 SLC6A17Q9H1V8 727 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 CWC22Q9HCG8 908 aaKnown RBP5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 CD320Q9NPF0 282 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 PRR36Q9H6K5 1346 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 ROBO2Q9HCK4 1378 aa5.67□□□□□ -1.5
TOPBP1-208ENST00000511439 HECW1Q76N89 1606 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 BIVM-ERCC5R4GMW8 1640 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 NPIPB6E9PJ23 425 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 CHMP4BP1P59074 171 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 ERVFC1P60507 584 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 MPP2Q14168 576 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 ATG14Q6ZNE5 492 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 AMIGO3Q86WK7 504 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 KIAA0825Q8IV33 1275 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 KCNN1Q92952 543 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 EAF1Q96JC9 268 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 CCDC74BQ96LY2 380 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 NT5C1AQ9BXI3 368 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 ACBD3Q9H3P7 528 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 RAPGEFL1Q9UHV5 662 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 CORINQ9Y5Q5 1042 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 SYNMO15061 1565 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 ABCA8O94911 1581 aa5.66□□□□□ -1.5
TOPBP1-208ENST00000511439 CNTLNQ9NXG0 1405 aa5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 SUPT6HQ7KZ85 1726 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 CEP170BQ9Y4F5 1589 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 ZGLP1P0C6A0 271 aa5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 CRKP46108 304 aa5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 SNX17Q15036 470 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms