RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 ZMYND12Q9H0C1 365 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 VAT1LQ9HCJ6 419 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 VPS54Q9P1Q0 977 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 CLEC11AQ9Y240 323 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 CSADQ9Y600 493 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 TMEM232C9JQI7 657 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 STXBP3O00186 592 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.21
SGCA-207ENST00000511303 RILPL1Q5EBL4 403 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 MYSM1Q5VVJ2 828 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 TTBK2Q6IQ55 1244 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.71□□□□□ -0.21
SGCA-207ENST00000511303 ZKSCAN4Q969J2 545 aaPredicted RBP13.71□□□□□ -0.21
SGCA-207ENST00000511303 RRAGCQ9HB90 399 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 C6orf50Q9HD87 102 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 GJB4Q9NTQ9 266 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 LMBRD1Q9NUN5 540 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 RTEL1Q9NZ71 1219 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 RCOR1Q9UKL0 485 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 PCDHA4Q9UN74 947 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 ZHX2Q9Y6X8 837 aa13.71□□□□□ -0.21
SGCA-207ENST00000511303 hCG_1642624A0A1W2PR95 340 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 BTBD18B2RXH4 712 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 UBE2Q2LH0YL09 131 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 RAD21O60216 631 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 TRAPPC10P48553 1259 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 PPATQ06203 517 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 SPP2Q13103 211 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 WWC2Q6AWC2 1192 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 HEATR3Q7Z4Q2 680 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 ERO1BQ86YB8 467 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 PRPF38AQ8NAV1 312 aaKnown RBP13.7□□□□□ -0.22
SGCA-207ENST00000511303 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 KCNJ14Q9UNX9 436 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 AFG3L2Q9Y4W6 797 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 MORC2Q9Y6X9 1032 aaPredicted RBP13.7□□□□□ -0.22
SGCA-207ENST00000511303 SSC5DA1L4H1 1573 aa13.7□□□□□ -0.22
SGCA-207ENST00000511303 CXCL11O14625 94 aa13.69□□□□□ -0.22
SGCA-207ENST00000511303 PRPF40AO75400 957 aaKnown RBP13.69□□□□□ -0.22
SGCA-207ENST00000511303 YEATS4O95619 227 aa13.69□□□□□ -0.22
SGCA-207ENST00000511303 BMP15O95972 392 aa13.69□□□□□ -0.22
SGCA-207ENST00000511303 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
SGCA-207ENST00000511303 FOSBP53539 338 aa13.69□□□□□ -0.22
SGCA-207ENST00000511303 NAPAP54920 295 aa13.69□□□□□ -0.22
SGCA-207ENST00000511303 IKQ13123 557 aaPredicted RBP13.69□□□□□ -0.22
SGCA-207ENST00000511303 NPY5RQ15761 445 aa13.69□□□□□ -0.22
SGCA-207ENST00000511303 LDLRAD1Q5T700 205 aa13.69□□□□□ -0.22
SGCA-207ENST00000511303 HOMER1Q86YM7 354 aa13.69□□□□□ -0.22
SGCA-207ENST00000511303 AMNQ9BXJ7 453 aa13.69□□□□□ -0.22
SGCA-207ENST00000511303 GLIS2Q9BZE0 524 aaPredicted RBP13.69□□□□□ -0.22
SGCA-207ENST00000511303 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
SGCA-207ENST00000511303 SMCO2A6NFE2 343 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 KIF28PB7ZC32 967 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 MBD3O95983 291 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 SLC16A2P36021 539 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 NASPP49321 788 aaPredicted RBP13.68□□□□□ -0.22
SGCA-207ENST00000511303 UBE2HP62256 183 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 VGLL4Q14135 290 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 KIAA1755Q5JYT7 1200 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 FAM83BQ5T0W9 1011 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 RASGRP2Q7LDG7 609 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 FBXO11Q86XK2 927 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 SPICE1Q8N0Z3 855 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 KCNG4Q8TDN1 519 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 LEO1Q8WVC0 666 aaPredicted RBP13.68□□□□□ -0.22
SGCA-207ENST00000511303 PIBF1Q8WXW3 757 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 SPATA32Q96LK8 384 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 MAF1Q9H063 256 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 CPVLQ9H3G5 476 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.68□□□□□ -0.22
SGCA-207ENST00000511303 EMILIN3Q9NT22 766 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 TMOD4Q9NZQ9 345 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 TFIP11Q9UBB9 837 aaKnown RBP13.68□□□□□ -0.22
SGCA-207ENST00000511303 PRR12Q9ULL5 1215 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 NOL7Q9UMY1 257 aaKnown RBP13.68□□□□□ -0.22
SGCA-207ENST00000511303 CEP131Q9UPN4 1083 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 CNPY2Q9Y2B0 182 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 SNCAIPQ9Y6H5 919 aa13.68□□□□□ -0.22
SGCA-207ENST00000511303 UTRNP46939 3433 aa13.67□□□□□ -0.22
SGCA-207ENST00000511303 M0R2N6 131 aa13.67□□□□□ -0.22
SGCA-207ENST00000511303 CDC37Q16543 378 aaPredicted RBP13.67□□□□□ -0.22
SGCA-207ENST00000511303 QRICH1Q2TAL8 776 aa13.67□□□□□ -0.22
SGCA-207ENST00000511303 FOXD4L6Q3SYB3 417 aaPredicted RBP13.67□□□□□ -0.22
SGCA-207ENST00000511303 FAM173BQ6P4H8 233 aa13.67□□□□□ -0.22
SGCA-207ENST00000511303 FOXD4L3Q6VB84 417 aaPredicted RBP13.67□□□□□ -0.22
SGCA-207ENST00000511303 KRT25Q7Z3Z0 450 aa13.67□□□□□ -0.22
SGCA-207ENST00000511303 SAMD3Q8N6K7 520 aa13.67□□□□□ -0.22
SGCA-207ENST00000511303 JMYQ8N9B5 988 aa13.67□□□□□ -0.22
SGCA-207ENST00000511303 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.22
SGCA-207ENST00000511303 SHISA4Q96DD7 197 aa13.67□□□□□ -0.22
SGCA-207ENST00000511303 NUP88Q99567 741 aaPredicted RBP13.67□□□□□ -0.22
SGCA-207ENST00000511303 RANBP17Q9H2T7 1088 aaKnown RBP13.67□□□□□ -0.22
SGCA-207ENST00000511303 RIC8AQ9NPQ8 531 aa13.67□□□□□ -0.22
SGCA-207ENST00000511303 PCDHA1Q9Y5I3 950 aa13.67□□□□□ -0.22
SGCA-207ENST00000511303 MYPNQ86TC9 1320 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 SPDYE5A6NIY4 337 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 TRAK2O60296 914 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms