RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 CCL15-CCL14A0A0B4J2E2 113 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 hCG_1642624A0A1W2PR95 340 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 SPDYE5A6NIY4 337 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 FAM155AB1AL88 458 aaPredicted RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 BHMG1C9JSJ3 638 aaPredicted RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 ASNSP08243 561 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 SSTR3P32745 418 aaPredicted RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 MAP3K10Q02779 954 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 IKQ13123 557 aaPredicted RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 WTAPQ15007 396 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 MAP3K11Q16584 847 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 CCL15Q16663 113 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 NOL9Q5SY16 702 aaKnown RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 FAM83BQ5T0W9 1011 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 COL13A1Q5TAT6 717 aaPredicted RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 TTBK2Q6IQ55 1244 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 USP17L2Q6R6M4 530 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 KCTD1Q719H9 257 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 ERO1BQ86YB8 467 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 CMTR1Q8N1G2 835 aaKnown RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 CCDC82Q8N4S0 544 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 ZNF280CQ8ND82 737 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 BRI3BPQ8WY22 251 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 BRF1Q92994 677 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 ZSCAN10Q96SZ4 725 aaPredicted RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 TMEM47Q9BQJ4 181 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 UBA5Q9GZZ9 404 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 UPF2Q9HAU5 1272 aaKnown RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 PDRG1Q9NUG6 133 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 MTMR4Q9NYA4 1195 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 AFG3L2Q9Y4W6 797 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 IGKV6D-41A0A0C4DH26 115 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 KLF18A0A0U1RQI7 1052 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 SH2B2O14492 632 aaPredicted RBP6.34□□□□□ -1.39
PROM1-211ENST00000511153 LARGE1O95461 756 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 NDUFB10O96000 172 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 SLC10A3P09131 477 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 CYP2C8P10632 490 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 RPS6KB1P23443 525 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 MCM5P33992 734 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 CLCN1P35523 988 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 NEK4P51957 841 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 CCT2P78371 535 aaKnown RBP6.34□□□□□ -1.39
PROM1-211ENST00000511153 IFIT1BQ5T764 474 aaKnown RBP6.34□□□□□ -1.39
PROM1-211ENST00000511153 SLFN13Q68D06 897 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 RCSD1Q6JBY9 416 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 MICU3Q86XE3 530 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 IQCA1Q86XH1 822 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 FAM43AQ8N2R8 423 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 NECAB1Q8N987 351 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 TBC1D32Q96NH3 1257 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 KIF2CQ99661 725 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 TANGO6Q9C0B7 1094 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 KAT14Q9H8E8 782 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 CNNM2Q9H8M5 875 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 LY9Q9HBG7 655 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 ZNF287Q9HBT7 754 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 ARHGEF10LQ9HCE6 1279 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 VAT1LQ9HCJ6 419 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 FAM217BQ9NTX9 383 aaPredicted RBP6.34□□□□□ -1.39
PROM1-211ENST00000511153 FBXO28Q9NVF7 368 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 BRPF3Q9ULD4 1205 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 CYP46A1Q9Y6A2 500 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 PTPRFP10586 1907 aa6.34□□□□□ -1.39
PROM1-211ENST00000511153 GREB1LQ9C091 1923 aaPredicted RBP6.34□□□□□ -1.39
PROM1-211ENST00000511153 ERICH2A1L162 156 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 BTBD19C9JJ37 291 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 USP17L10C9JJH3 530 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 F5H6K3 240 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 IGF2BP3O00425 579 aaKnown RBP eCLIP6.33□□□□□ -1.4
PROM1-211ENST00000511153 HRO43593 1189 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 CD2BP2O95400 341 aaKnown RBP6.33□□□□□ -1.4
PROM1-211ENST00000511153 TBC1D8O95759 1140 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 TTLL1O95922 423 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 FGRP09769 529 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 AK2P54819 239 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 FKBP1BP68106 108 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 KLRC3Q07444 240 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 PPIL2Q13356 520 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 SNAPC2Q13487 334 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 KRT32Q14532 448 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 SEC23AQ15436 765 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 SWT1Q5T5J6 900 aaKnown RBP6.33□□□□□ -1.4
PROM1-211ENST00000511153 RUFY3Q7L099 469 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 DHX32Q7L7V1 743 aaKnown RBP6.33□□□□□ -1.4
PROM1-211ENST00000511153 PNMA1Q8ND90 353 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 IGDCC4Q8TDY8 1250 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 KCNB2Q92953 911 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 CCDC17Q96LX7 622 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 PTPN18Q99952 460 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 R3HDMLQ9H3Y0 253 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 RPAP3Q9H6T3 665 aaPredicted RBP6.33□□□□□ -1.4
PROM1-211ENST00000511153 TMEM134Q9H6X4 195 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 KANSL2Q9H9L4 492 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 AS3MTQ9HBK9 375 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 NCOA5Q9HCD5 579 aaKnown RBP6.33□□□□□ -1.4
PROM1-211ENST00000511153 TMOD4Q9NZQ9 345 aa6.33□□□□□ -1.4
PROM1-211ENST00000511153 CCDC69A6NI79 296 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 RASSF10A6NK89 507 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 DDX11L8A8MPP1 907 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms