RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 TEX13BQ9BXU2 312 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 DCTPP1Q9H773 170 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 CEP290O15078 2479 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 ATP2A1O14983 1001 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 NDUFB10O96000 172 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 RAG1P15918 1043 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 C9orf50Q5SZB4 431 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 SNRNP48Q6IEG0 339 aaKnown RBP9.95□□□□□ -0.82
TRIO-217ENST00000511019 IFNL3Q8IZI9 196 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 NUP133Q8WUM0 1156 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 KIFC2Q96AC6 838 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 TSEN34Q9BSV6 310 aaKnown RBP9.95□□□□□ -0.82
TRIO-217ENST00000511019 NACAP1Q9BZK3 213 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 PDLIM7Q9NR12 457 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 TMEM39AQ9NV64 488 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 FEM1BQ9UK73 627 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 RIPK3Q9Y572 518 aa9.95□□□□□ -0.82
TRIO-217ENST00000511019 NAV1Q8NEY1 1877 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 DNAJC25-GNG10A0A024R161 153 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 DCDC2CA8MYV0 355 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 GPAA1O43292 621 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 PRDM1O75626 825 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 SNAI1O95863 264 aaPredicted RBP9.94□□□□□ -0.82
TRIO-217ENST00000511019 TTLL1O95922 423 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 SLC3A2P08195 630 aaKnown RBP9.94□□□□□ -0.82
TRIO-217ENST00000511019 CLTBP09497 229 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 ACLYP53396 1101 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 SMAD3P84022 425 aaKnown RBP9.94□□□□□ -0.82
TRIO-217ENST00000511019 MAMDC4Q6UXC1 1216 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 ZNF467Q7Z7K2 595 aaPredicted RBP9.94□□□□□ -0.82
TRIO-217ENST00000511019 ANKRD35Q8N283 1001 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 GUCD1Q96NT3 240 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 SEMA6BQ9H3T3 888 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 RAVER2Q9HCJ3 691 aaKnown RBP9.94□□□□□ -0.82
TRIO-217ENST00000511019 STARD7Q9NQZ5 370 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 MTMR4Q9NYA4 1195 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 FBXO40Q9UH90 709 aa9.94□□□□□ -0.82
TRIO-217ENST00000511019 SYNGAP1Q96PV0 1343 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 IGKV6D-41A0A0C4DH26 115 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 A0A1W2PQ45 241 aaPredicted RBP9.93□□□□□ -0.82
TRIO-217ENST00000511019 A0A1W2PQY0 241 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 MOXD2PA6NHM9 499 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 KIAA0355O15063 1070 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 PQBP1O60828 265 aaKnown RBP9.93□□□□□ -0.82
TRIO-217ENST00000511019 ADAMTS4O75173 837 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 DUSP11O75319 330 aaKnown RBP9.93□□□□□ -0.82
TRIO-217ENST00000511019 FDX1P10109 184 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 BMP3P12645 472 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 TFAP4Q01664 338 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 PDE4BQ07343 736 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 ACVR2BQ13705 512 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 KCNA10Q16322 511 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 TSHZ3Q63HK5 1081 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 SLFN13Q68D06 897 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 KLHDC9Q8NEP7 349 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 CHST13Q8NET6 341 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 NEDD1Q8NHV4 660 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 VTI1AQ96AJ9 217 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 CEP95Q96GE4 821 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 TOX2Q96NM4 488 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 CDX2Q99626 313 aaPredicted RBP9.93□□□□□ -0.82
TRIO-217ENST00000511019 ABHD16BQ9H3Z7 469 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 SPC25Q9HBM1 224 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 SLC38A10Q9HBR0 1119 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 ZHX1Q9UKY1 873 aaPredicted RBP9.93□□□□□ -0.82
TRIO-217ENST00000511019 SYNPO2Q9UMS6 1093 aa9.93□□□□□ -0.82
TRIO-217ENST00000511019 ZNF236Q9UL36 1845 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 M0R2C6 588 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 ERC2O15083 957 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 TSPY3P0CV98 308 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 TSPY8P0CW00 308 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 ITGB8P26012 769 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 OAZ1P54368 228 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 FPGSQ05932 587 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 FAAP100Q0VG06 881 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 ANKRD33Q7Z3H0 272 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRIO-217ENST00000511019 PCSK9Q8NBP7 692 aaKnown RBP9.92□□□□□ -0.82
TRIO-217ENST00000511019 GMCL1P1Q8NEA9 526 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 CHURC1Q8WUH1 139 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 GLT1D1Q96MS3 346 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 EPB41L4AQ9HCS5 686 aaPredicted RBP9.92□□□□□ -0.82
TRIO-217ENST00000511019 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.92□□□□□ -0.82
TRIO-217ENST00000511019 ISY1Q9ULR0 285 aaKnown RBP9.92□□□□□ -0.82
TRIO-217ENST00000511019 RLFQ13129 1914 aa9.92□□□□□ -0.82
TRIO-217ENST00000511019 ROBO3Q96MS0 1386 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 ELP1O95163 1332 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 TTC41PQ6P2S7 1318 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 SYNRGQ9UMZ2 1314 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.91□□□□□ -0.82
TRIO-217ENST00000511019 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.91□□□□□ -0.82
TRIO-217ENST00000511019 TMEM232C9JQI7 657 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 C6orf222P0C671 652 aaPredicted RBP9.91□□□□□ -0.82
TRIO-217ENST00000511019 EPHB4P54760 987 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 IKQ13123 557 aaPredicted RBP9.91□□□□□ -0.82
TRIO-217ENST00000511019 CCDC144BQ3MJ40 725 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 GNASQ5JWF2 1037 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 PPP4R3BQ5MIZ7 849 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 CCSAPQ6IQ19 270 aaPredicted RBP9.91□□□□□ -0.82
TRIO-217ENST00000511019 LRRC47Q8N1G4 583 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms