RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 TPX2Q9ULW0 747 aaKnown RBP6.5□□□□□ -1.37
MBD4-209ENST00000511009 DNAJC25-GNG10A0A024R161 153 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 KIAA1324LA8MWY0 1029 aaPredicted RBP6.49□□□□□ -1.37
MBD4-209ENST00000511009 PDE8AO60658 829 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 NFICP08651 508 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 PABPC1P11940 636 aaKnown RBP6.49□□□□□ -1.37
MBD4-209ENST00000511009 BMP3P12645 472 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 CYP7A1P22680 504 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 PPP2R5DQ14738 602 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 NBPF9Q3BBW0 867 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 FBLIM1Q8WUP2 373 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 BRF1Q92994 677 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 IER2Q9BTL4 223 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 MRPL4Q9BYD3 311 aaKnown RBP6.49□□□□□ -1.37
MBD4-209ENST00000511009 SEMA6CQ9H3T2 930 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 CAAP1Q9H8G2 361 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 PRDM10Q9NQV6 1147 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 DDX56Q9NY93 547 aaKnown RBP6.49□□□□□ -1.37
MBD4-209ENST00000511009 SFMBT1Q9UHJ3 866 aa6.49□□□□□ -1.37
MBD4-209ENST00000511009 GSC2O15499 205 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 SLITRK5O94991 958 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 KCNH1O95259 989 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 TGFB1P01137 390 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 STAT3P40763 770 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 SGO2Q562F6 1265 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 CNNM4Q6P4Q7 775 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 BEND4Q6ZU67 534 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 THNSL2Q86YJ6 484 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 TRIM59Q8IWR1 403 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 RPUSD2Q8IZ73 545 aaKnown RBP6.48□□□□□ -1.37
MBD4-209ENST00000511009 GIMAP7Q8NHV1 300 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 RIN3Q8TB24 985 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 BTN2A2Q8WVV5 523 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 RCC1LQ96I51 464 aaKnown RBP6.48□□□□□ -1.37
MBD4-209ENST00000511009 FBXL18Q96ME1 805 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 DSCC1Q9BVC3 393 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 NOL6Q9H6R4 1146 aaKnown RBP6.48□□□□□ -1.37
MBD4-209ENST00000511009 KLHL42Q9P2K6 505 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 CGGBP1Q9UFW8 167 aaPredicted RBP6.48□□□□□ -1.37
MBD4-209ENST00000511009 EMC9Q9Y3B6 208 aa6.48□□□□□ -1.37
MBD4-209ENST00000511009 A0A087WZG4 1122 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 SHOXO15266 292 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 TBX1O43435 398 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 S100BP04271 92 aaPredicted RBP6.47□□□□□ -1.37
MBD4-209ENST00000511009 APPP05067 770 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 GRIA2P42262 883 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 KCNJ6P48051 423 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 ARHGEF39Q8N4T4 335 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 TOP6BLQ8N6T0 577 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 ZNF513Q8N8E2 541 aaPredicted RBP6.47□□□□□ -1.37
MBD4-209ENST00000511009 VWCEQ96DN2 955 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 MRGPRX3Q96LB0 322 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 CEP89Q96ST8 783 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 DBNDD2Q9BQY9 259 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 HOMER2Q9NSB8 354 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 MAGEC2Q9UBF1 373 aaPredicted RBP6.47□□□□□ -1.37
MBD4-209ENST00000511009 NDOR1Q9UHB4 597 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 MCM8Q9UJA3 840 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 DIS3Q9Y2L1 958 aaKnown RBP6.47□□□□□ -1.37
MBD4-209ENST00000511009 FHOD1Q9Y613 1164 aa6.47□□□□□ -1.37
MBD4-209ENST00000511009 ADAMTS4O75173 837 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 SNRPB2P08579 225 aaKnown RBP6.46□□□□□ -1.38
MBD4-209ENST00000511009 SPINK2P20155 84 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 MAP4P27816 1152 aaKnown RBP6.46□□□□□ -1.38
MBD4-209ENST00000511009 ZNF445P59923 1031 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 NFKB2Q00653 900 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 CDK5R2Q13319 367 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 NFKBIBQ15653 356 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 PLEKHG6Q3KR16 790 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 WWC2Q6AWC2 1192 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 GTF2IRD2BQ6EKJ0 949 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 NOL8Q76FK4 1167 aaKnown RBP6.46□□□□□ -1.38
MBD4-209ENST00000511009 GTF2IRD2Q86UP8 949 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 FERMT3Q86UX7 667 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 SHISA5Q8N114 240 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 FIBCD1Q8N539 461 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 PRPF38AQ8NAV1 312 aaKnown RBP6.46□□□□□ -1.38
MBD4-209ENST00000511009 SYTL5Q8TDW5 730 aaPredicted RBP6.46□□□□□ -1.38
MBD4-209ENST00000511009 KCTD13Q8WZ19 329 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 EZH1Q92800 747 aaPredicted RBP6.46□□□□□ -1.38
MBD4-209ENST00000511009 GATA6Q92908 595 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 OSBP2Q969R2 916 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 ZDHHC15Q96MV8 337 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 CLUHP3Q96NS8 147 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 PRDM14Q9GZV8 571 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 ASCC2Q9H1I8 757 aaPredicted RBP6.46□□□□□ -1.38
MBD4-209ENST00000511009 KCNF1Q9H3M0 494 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 TYW1Q9NV66 732 aaKnown RBP6.46□□□□□ -1.38
MBD4-209ENST00000511009 INTS7Q9NVH2 962 aaKnown RBP6.46□□□□□ -1.38
MBD4-209ENST00000511009 GFOD1Q9NXC2 390 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 KCNH3Q9ULD8 1083 aa6.46□□□□□ -1.38
MBD4-209ENST00000511009 SF3B6Q9Y3B4 125 aaKnown RBP6.46□□□□□ -1.38
MBD4-209ENST00000511009 A0A087X0B3 334 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 FAM95CA0A1B0GW59 222 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 PDGFRBP09619 1106 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 GABREP78334 506 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 PAOXQ6QHF9 649 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 LRRTM3Q86VH5 581 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 UBR7Q8N806 425 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 COX4I2Q96KJ9 171 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms