RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 GOLGA8BA8MQT2 603 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 GPR25O00155 361 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 DDAH1O94760 285 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 GCLCP48506 637 aaPredicted RBP12.15□□□□□ -0.46
NR1I3-227ENST00000510951 CTCFP49711 727 aaPredicted RBP12.15□□□□□ -0.46
NR1I3-227ENST00000510951 RBM25P49756 843 aaKnown RBP12.15□□□□□ -0.46
NR1I3-227ENST00000510951 LBX1P52954 281 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 TOB2Q14106 344 aaPredicted RBP12.15□□□□□ -0.46
NR1I3-227ENST00000510951 PLS1Q14651 629 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 GRM4Q14833 912 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 ASPRV1Q53RT3 343 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 SYDE2Q5VT97 1194 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 APOA5Q6Q788 366 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 C17orf99Q6UX52 265 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 NOL8Q76FK4 1167 aaKnown RBP12.15□□□□□ -0.46
NR1I3-227ENST00000510951 SGMS1Q86VZ5 419 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 STAG2Q8N3U4 1231 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 ZNF296Q8WUU4 475 aaPredicted RBP12.15□□□□□ -0.46
NR1I3-227ENST00000510951 TBC1D32Q96NH3 1257 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 UBA5Q9GZZ9 404 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 BTBD7Q9P203 1132 aa12.15□□□□□ -0.46
NR1I3-227ENST00000510951 MYPNQ86TC9 1320 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 VWA5AO00534 786 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 DHX16O60231 1041 aaKnown RBP12.14□□□□□ -0.47
NR1I3-227ENST00000510951 CNMDO75829 334 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 BCRP11274 1271 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-227ENST00000510951 SLC4A3P48751 1232 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 ERVK-9P63128 1117 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 ERVK-24P63145 666 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 TROAPQ12815 778 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 FAM110CQ1W6H9 321 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 GPATCH4Q5T3I0 446 aaKnown RBP12.14□□□□□ -0.47
NR1I3-227ENST00000510951 SYNE3Q6ZMZ3 975 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 FAM160B2Q86V87 743 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 TMTC2Q8N394 836 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 CTCFLQ8NI51 663 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-227ENST00000510951 CD99L2Q8TCZ2 262 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-227ENST00000510951 CHURC1Q8WUH1 139 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 IL17RAQ96F46 866 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 KIF2CQ99661 725 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 HOXC10Q9NYD6 342 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 RBPJLQ9UBG7 517 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 MAD2L2Q9UI95 211 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 PRR12Q9ULL5 1215 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 CTDP1Q9Y5B0 961 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-227ENST00000510951 PLXNA1Q9UIW2 1896 aa12.14□□□□□ -0.47
NR1I3-227ENST00000510951 GOLGA8AA7E2F4 631 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 KLRF2D3W0D1 207 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 ZBTB43O43298 467 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 FKTNO75072 461 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 NEK4P51957 841 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 AK2P54819 239 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 SP3Q02447 781 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 TMEM132BQ14DG7 1078 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 CCDC174Q6PII3 467 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 LBX2Q6XYB7 198 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 CPXCR1Q8N123 301 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 PRPF38AQ8NAV1 312 aaKnown RBP12.13□□□□□ -0.47
NR1I3-227ENST00000510951 GPRC5AQ8NFJ5 357 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 ARHGAP39Q9C0H5 1083 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 RABGAP1Q9Y3P9 1069 aa12.13□□□□□ -0.47
NR1I3-227ENST00000510951 PALM3A6NDB9 673 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-227ENST00000510951 PLA2G6O60733 806 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 ZBED4O75132 1171 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 PLEKHA8P1O95397 391 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 CALM1P0DP23 149 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 CALM2P0DP24 149 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 CALM3P0DP25 149 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 KIF5BP33176 963 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-227ENST00000510951 CAP1Q01518 475 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 RTN1Q16799 776 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 Q3C1V9 767 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 WDR78Q5VTH9 848 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 BTNL9Q6UXG8 535 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 CMTR1Q8N1G2 835 aaKnown RBP12.12□□□□□ -0.47
NR1I3-227ENST00000510951 MB21D1Q8N884 522 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 REPS2Q8NFH8 660 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 PIBF1Q8WXW3 757 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 AGXT2Q9BYV1 514 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 SPATC1LQ9H0A9 340 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 PORCNQ9H237 461 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 SLC38A10Q9HBR0 1119 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 RAVER2Q9HCJ3 691 aaKnown RBP12.12□□□□□ -0.47
NR1I3-227ENST00000510951 VAT1LQ9HCJ6 419 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 MORF4L1Q9UBU8 362 aa12.12□□□□□ -0.47
NR1I3-227ENST00000510951 LCTP09848 1927 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 CTGFP29279 349 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 METAP2P50579 478 aaKnown RBP eCLIP12.11□□□□□ -0.47
NR1I3-227ENST00000510951 STK3Q13188 491 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 KIF22Q14807 665 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 CDC37Q16543 378 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-227ENST00000510951 SLC35G1Q2M3R5 365 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 SNRNP48Q6IEG0 339 aaKnown RBP12.11□□□□□ -0.47
NR1I3-227ENST00000510951 NBPF11Q86T75 865 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 HOMER1Q86YM7 354 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 CCAR1Q8IX12 1150 aaKnown RBP12.11□□□□□ -0.47
NR1I3-227ENST00000510951 ADGRF4Q8IZF3 695 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms