RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	CYP2C18	P33260	490 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	CDK7	P50613	346 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	ACLY	P53396	1101 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	KCNC4	Q03721	635 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	USP17L2	Q6R6M4	530 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	LBX2	Q6XYB7	198 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	LENG1	Q96BZ8	264 aa	Predicted RBP	11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	PTPRS	Q13332	1948 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	ROBO3	Q96MS0	1386 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	EPG5	Q9HCE0	2579 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	GPR75-ASB3	A0A0A6YYF3	556 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	USP17L15	C9J2P7	530 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	USP17L13	C9JLJ4	530 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	USP17L11	C9JVI0	530 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	USP17L18	D6R9N7	530 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	USP17L22	D6RA61	530 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	USP17L17	D6RBQ6	530 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	USP17L19	D6RCP7	530 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	USP17L20	D6RJB6	530 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	CA3	P07451	260 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	USP17L24	Q0WX57	530 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	RABL6	Q3YEC7	729 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	CATSPERG	Q6ZRH7	1159 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	DZIP1	Q86YF9	867 aa	Known RBP	11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	LPIN2	Q92539	896 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	CDCA7L	Q96GN5	454 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	C12orf42	Q96LP6	360 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	TSEN34	Q9BSV6	310 aa	Known RBP	11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	BICC1	Q9H694	974 aa	Known RBP	11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	DNAJC18	Q9H819	358 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	COL11A1	P12107	1806 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	PARP14	Q460N5	1801 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	MCM3AP	O60318	1980 aa		11.94	□□□□□ -0.5
PTPN20-223	ENST00000509900	MROH7	Q68CQ1	1323 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	STRN	O43815	780 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	GFRA3	O60609	400 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	LPXN	O60711	386 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	ARHGEF15	O94989	841 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	GDF11	O95390	407 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	IL9	P15248	144 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	ANKRD44	Q8N8A2	993 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	ZNF384	Q8TF68	577 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	NUP133	Q8WUM0	1156 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	MAML3	Q96JK9	1138 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	DENND2A	Q9ULE3	1009 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	ZBTB21	Q9ULJ3	1066 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	SLC4A7	Q9Y6M7	1214 aa		11.93	□□□□□ -0.5
PTPN20-223	ENST00000509900	SMAP	O00193	183 aa		11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	APAF1	O14727	1248 aa		11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	TAL1	P17542	331 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	PHKA1	P46020	1223 aa		11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	PRSS12	P56730	875 aa		11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	GRB10	Q13322	594 aa		11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	ZYX	Q15942	572 aa	Known RBP	11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	SLF2	Q8IX21	1173 aa		11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	FAM126B	Q8IXS8	530 aa		11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	KLHDC9	Q8NEP7	349 aa		11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	VWCE	Q96DN2	955 aa		11.92	□□□□□ -0.5
PTPN20-223	ENST00000509900	UMODL1	Q5DID0	1318 aa		11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	SYNRG	Q9UMZ2	1314 aa		11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	SEMA3E	O15041	775 aa		11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	ATP2A2	P16615	1042 aa	Known RBP	11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	WDR43	Q15061	677 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	KCNA10	Q16322	511 aa		11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	LEXM	Q3ZCV2	418 aa		11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	TMEM67	Q5HYA8	995 aa		11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	ZGPAT	Q8N5A5	531 aa	Known RBP	11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	ARNTL2	Q8WYA1	636 aa		11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	UBE2Z	Q9H832	354 aa	Predicted RBP	11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	GNL3L	Q9NVN8	582 aa	Known RBP	11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	PI4KB	Q9UBF8	816 aa		11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	NRBP1	Q9UHY1	535 aa		11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	BAHCC1	Q9P281	2608 aa		11.91	□□□□□ -0.5
PTPN20-223	ENST00000509900	ELP1	O95163	1332 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	MYH1	P12882	1939 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	MYADML2	A6NDP7	307 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	MOXD2P	A6NHM9	499 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	ALDH1L1	O75891	902 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	KRT37	O76014	449 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	CD4	P01730	458 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	VCAM1	P19320	739 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	ERCC3	P19447	782 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	PPP4C	P60510	307 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	MECOM	Q03112	1051 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	TAP1	Q03518	808 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	ERMP1	Q7Z2K6	904 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	SPRED2	Q7Z698	418 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	MFSD14A	Q96MC6	490 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	RTN4	Q9NQC3	1192 aa	Known RBP	11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	GINM1	Q9NU53	330 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	SLC5A4	Q9NY91	659 aa		11.9	□□□□□ -0.5
PTPN20-223	ENST00000509900	ABCF2	Q9UG63	623 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms