RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 GTF2F1P35269 517 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHD1-205ENST00000508756 FXNQ16595 210 aa11.14□□□□□ -0.63
CHD1-205ENST00000508756 ADAT2Q7Z6V5 191 aaKnown RBP11.14□□□□□ -0.63
CHD1-205ENST00000508756 LINC00116Q8NCU8 138 aa11.14□□□□□ -0.63
CHD1-205ENST00000508756 DHX38Q92620 1227 aaKnown RBP11.14□□□□□ -0.63
CHD1-205ENST00000508756 GBP3Q9H0R5 595 aa11.14□□□□□ -0.63
CHD1-205ENST00000508756 TMEM59LQ9UK28 342 aa11.14□□□□□ -0.63
CHD1-205ENST00000508756 CTNND2Q9UQB3 1225 aa11.14□□□□□ -0.63
CHD1-205ENST00000508756 SSU72P8A0A1W2PR75 194 aa11.13□□□□□ -0.63
CHD1-205ENST00000508756 DDAH1O94760 285 aa11.13□□□□□ -0.63
CHD1-205ENST00000508756 HK2P52789 917 aa11.13□□□□□ -0.63
CHD1-205ENST00000508756 MRM1Q6IN84 353 aaKnown RBP11.13□□□□□ -0.63
CHD1-205ENST00000508756 ZPBP2Q6X784 338 aa11.13□□□□□ -0.63
CHD1-205ENST00000508756 ST7Q9NRC1 585 aa11.13□□□□□ -0.63
CHD1-205ENST00000508756 APEX2Q9UBZ4 518 aa11.13□□□□□ -0.63
CHD1-205ENST00000508756 ANKRD34BA5PLL1 514 aa11.12□□□□□ -0.63
CHD1-205ENST00000508756 GSNP06396 782 aa11.12□□□□□ -0.63
CHD1-205ENST00000508756 RPL10P27635 214 aaKnown RBP11.12□□□□□ -0.63
CHD1-205ENST00000508756 PPP2R5DQ14738 602 aa11.12□□□□□ -0.63
CHD1-205ENST00000508756 ZDHHC15Q96MV8 337 aa11.12□□□□□ -0.63
CHD1-205ENST00000508756 TMEM82A0PJX8 343 aa11.11□□□□□ -0.63
CHD1-205ENST00000508756 GJB6O95452 261 aa11.11□□□□□ -0.63
CHD1-205ENST00000508756 ZGLP1P0C6A0 271 aa11.11□□□□□ -0.63
CHD1-205ENST00000508756 BMP8BP34820 402 aa11.11□□□□□ -0.63
CHD1-205ENST00000508756 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
CHD1-205ENST00000508756 PPP1R1BQ9UD71 204 aaPredicted RBP11.11□□□□□ -0.63
CHD1-205ENST00000508756 EBF1Q9UH73 591 aa11.11□□□□□ -0.63
CHD1-205ENST00000508756 ZNF281Q9Y2X9 895 aa11.11□□□□□ -0.63
CHD1-205ENST00000508756 A0A087WZG4 1122 aa11.1□□□□□ -0.63
CHD1-205ENST00000508756 PPM1BO75688 479 aa11.1□□□□□ -0.63
CHD1-205ENST00000508756 ZNF205O95201 554 aa11.1□□□□□ -0.63
CHD1-205ENST00000508756 VAV1P15498 845 aa11.1□□□□□ -0.63
CHD1-205ENST00000508756 GDNFP39905 211 aa11.1□□□□□ -0.63
CHD1-205ENST00000508756 CWF19L1Q69YN2 538 aaKnown RBP11.1□□□□□ -0.63
CHD1-205ENST00000508756 CKAP2LQ8IYA6 745 aa11.1□□□□□ -0.63
CHD1-205ENST00000508756 ZNF513Q8N8E2 541 aaPredicted RBP11.1□□□□□ -0.63
CHD1-205ENST00000508756 SUGT1Q9Y2Z0 365 aa11.1□□□□□ -0.63
CHD1-205ENST00000508756 ERVFC1P60507 584 aa11.09□□□□□ -0.63
CHD1-205ENST00000508756 RAB33AQ14088 237 aa11.09□□□□□ -0.63
CHD1-205ENST00000508756 SF3A1Q15459 793 aaKnown RBP11.09□□□□□ -0.63
CHD1-205ENST00000508756 DDR2Q16832 855 aa11.09□□□□□ -0.63
CHD1-205ENST00000508756 FLAD1Q8NFF5 587 aa11.09□□□□□ -0.63
CHD1-205ENST00000508756 SREK1Q8WXA9 508 aaKnown RBP11.09□□□□□ -0.63
CHD1-205ENST00000508756 CGGBP1Q9UFW8 167 aaPredicted RBP11.09□□□□□ -0.63
CHD1-205ENST00000508756 SF3B6Q9Y3B4 125 aaKnown RBP11.09□□□□□ -0.63
CHD1-205ENST00000508756 TAL1P17542 331 aaPredicted RBP11.08□□□□□ -0.64
CHD1-205ENST00000508756 ATG4DQ86TL0 474 aaPredicted RBP11.08□□□□□ -0.64
CHD1-205ENST00000508756 SYTL4Q96C24 671 aaPredicted RBP11.08□□□□□ -0.64
CHD1-205ENST00000508756 CCDC120Q96HB5 630 aa11.08□□□□□ -0.64
CHD1-205ENST00000508756 APBA2Q99767 749 aa11.08□□□□□ -0.64
CHD1-205ENST00000508756 G6PC3Q9BUM1 346 aa11.08□□□□□ -0.64
CHD1-205ENST00000508756 LGR4Q9BXB1 951 aa11.08□□□□□ -0.64
CHD1-205ENST00000508756 SLC12A9Q9BXP2 914 aa11.08□□□□□ -0.64
CHD1-205ENST00000508756 TRIM55Q9BYV6 548 aa11.08□□□□□ -0.64
CHD1-205ENST00000508756 DIS3Q9Y2L1 958 aaKnown RBP11.08□□□□□ -0.64
CHD1-205ENST00000508756 SUSD5O60279 629 aa11.07□□□□□ -0.64
CHD1-205ENST00000508756 PAPLNO95428 1278 aa11.07□□□□□ -0.64
CHD1-205ENST00000508756 ITGB5P18084 799 aa11.07□□□□□ -0.64
CHD1-205ENST00000508756 RTP2Q5QGT7 225 aa11.07□□□□□ -0.64
CHD1-205ENST00000508756 CDADC1Q9BWV3 514 aa11.07□□□□□ -0.64
CHD1-205ENST00000508756 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
CHD1-205ENST00000508756 ZMYM5Q9UJ78 669 aa11.07□□□□□ -0.64
CHD1-205ENST00000508756 CD3EP07766 207 aa11.06□□□□□ -0.64
CHD1-205ENST00000508756 ZNF143P52747 638 aaPredicted RBP11.06□□□□□ -0.64
CHD1-205ENST00000508756 FYB2Q5VWT5 728 aa11.06□□□□□ -0.64
CHD1-205ENST00000508756 MCTP1Q6DN14 999 aa11.06□□□□□ -0.64
CHD1-205ENST00000508756 ARHGEF39Q8N4T4 335 aa11.06□□□□□ -0.64
CHD1-205ENST00000508756 LINC01599Q8WXQ3 324 aa11.06□□□□□ -0.64
CHD1-205ENST00000508756 PPP1R14AQ96A00 147 aa11.06□□□□□ -0.64
CHD1-205ENST00000508756 VAMP4O75379 141 aa11.05□□□□□ -0.64
CHD1-205ENST00000508756 GSTM1P09488 218 aa11.05□□□□□ -0.64
CHD1-205ENST00000508756 NAT2P11245 290 aa11.05□□□□□ -0.64
CHD1-205ENST00000508756 TRHRP34981 398 aaPredicted RBP11.05□□□□□ -0.64
CHD1-205ENST00000508756 DUSP4Q13115 394 aa11.05□□□□□ -0.64
CHD1-205ENST00000508756 ARMC5Q96C12 935 aa11.05□□□□□ -0.64
CHD1-205ENST00000508756 RCC1LQ96I51 464 aaKnown RBP11.05□□□□□ -0.64
CHD1-205ENST00000508756 MCMBPQ9BTE3 642 aa11.05□□□□□ -0.64
CHD1-205ENST00000508756 AKT3Q9Y243 479 aa11.05□□□□□ -0.64
CHD1-205ENST00000508756 USP2O75604 605 aaPredicted RBP11.04□□□□□ -0.64
CHD1-205ENST00000508756 IFNGR1P15260 489 aa11.04□□□□□ -0.64
CHD1-205ENST00000508756 DPY19L1Q2PZI1 675 aa11.04□□□□□ -0.64
CHD1-205ENST00000508756 PDZD8Q8NEN9 1154 aa11.04□□□□□ -0.64
CHD1-205ENST00000508756 MAP6Q96JE9 813 aa11.04□□□□□ -0.64
CHD1-205ENST00000508756 FCRL3Q96P31 734 aaPredicted RBP11.04□□□□□ -0.64
CHD1-205ENST00000508756 BIN1O00499 593 aa11.03□□□□□ -0.64
CHD1-205ENST00000508756 HPXP02790 462 aa11.03□□□□□ -0.64
CHD1-205ENST00000508756 AFMP43652 599 aa11.03□□□□□ -0.64
CHD1-205ENST00000508756 POU4F1Q01851 419 aa11.03□□□□□ -0.64
CHD1-205ENST00000508756 SV2CQ496J9 727 aa11.03□□□□□ -0.64
CHD1-205ENST00000508756 BVESQ8NE79 360 aa11.03□□□□□ -0.64
CHD1-205ENST00000508756 HHIPL1Q96JK4 782 aa11.03□□□□□ -0.64
CHD1-205ENST00000508756 FCRL2Q96LA5 508 aaPredicted RBP11.03□□□□□ -0.64
CHD1-205ENST00000508756 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
CHD1-205ENST00000508756 C19orf44Q9H6X5 657 aa11.03□□□□□ -0.64
CHD1-205ENST00000508756 SP110Q9HB58 689 aa11.03□□□□□ -0.64
CHD1-205ENST00000508756 ERVK13-1Q9NX77 482 aa11.03□□□□□ -0.64
CHD1-205ENST00000508756 STXBP3O00186 592 aa11.02□□□□□ -0.65
CHD1-205ENST00000508756 TIGD5Q53EQ6 642 aa11.02□□□□□ -0.65
CHD1-205ENST00000508756 EEPD1Q7L9B9 569 aa11.02□□□□□ -0.65
CHD1-205ENST00000508756 EMC9Q9Y3B6 208 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms