RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 LIMCH1Q9UPQ0 1083 aa23.36■■□□□ 1.33
USP53-203ENST00000507597 FRMPD2Q68DX3 1309 aaPredicted RBP23.35■■□□□ 1.33
USP53-203ENST00000507597 PTPRFP10586 1907 aa23.35■■□□□ 1.33
USP53-203ENST00000507597 PALM3A6NDB9 673 aaPredicted RBP23.35■■□□□ 1.33
USP53-203ENST00000507597 COL9A3Q14050 684 aaPredicted RBP23.35■■□□□ 1.33
USP53-203ENST00000507597 SYDE2Q5VT97 1194 aa23.35■■□□□ 1.33
USP53-203ENST00000507597 SAMD1Q6SPF0 538 aaPredicted RBP23.35■■□□□ 1.33
USP53-203ENST00000507597 KIFC2Q96AC6 838 aa23.35■■□□□ 1.33
USP53-203ENST00000507597 P2RX7Q99572 595 aaKnown RBP23.35■■□□□ 1.33
USP53-203ENST00000507597 SLKQ9H2G2 1235 aaPredicted RBP23.35■■□□□ 1.33
USP53-203ENST00000507597 RNF186Q9NXI6 227 aa23.35■■□□□ 1.33
USP53-203ENST00000507597 MAD2L2Q9UI95 211 aa23.35■■□□□ 1.33
USP53-203ENST00000507597 BRPF3Q9ULD4 1205 aa23.35■■□□□ 1.33
USP53-203ENST00000507597 RABGAP1Q9Y3P9 1069 aa23.35■■□□□ 1.33
USP53-203ENST00000507597 TLR2O60603 784 aa23.34■■□□□ 1.33
USP53-203ENST00000507597 TRPA1O75762 1119 aa23.34■■□□□ 1.33
USP53-203ENST00000507597 CPLX1O14810 134 aa23.33■■□□□ 1.33
USP53-203ENST00000507597 GOLGA8HP0CJ92 632 aa23.33■■□□□ 1.33
USP53-203ENST00000507597 PDIA3P30101 505 aaKnown RBP23.33■■□□□ 1.33
USP53-203ENST00000507597 CCNA1P78396 465 aa23.33■■□□□ 1.33
USP53-203ENST00000507597 JMYQ8N9B5 988 aa23.33■■□□□ 1.33
USP53-203ENST00000507597 MYL10Q9BUA6 226 aa23.33■■□□□ 1.33
USP53-203ENST00000507597 SH2B1Q9NRF2 756 aaPredicted RBP23.33■■□□□ 1.33
USP53-203ENST00000507597 THSD7BQ9C0I4 1608 aa23.33■■□□□ 1.32
USP53-203ENST00000507597 SPDYE16A6NNV3 312 aaPredicted RBP23.32■■□□□ 1.32
USP53-203ENST00000507597 CDKL5O76039 1030 aa23.32■■□□□ 1.32
USP53-203ENST00000507597 CYP2C8P10632 490 aa23.32■■□□□ 1.32
USP53-203ENST00000507597 COPB2P35606 906 aa23.32■■□□□ 1.32
USP53-203ENST00000507597 CCAR1Q8IX12 1150 aaKnown RBP23.32■■□□□ 1.32
USP53-203ENST00000507597 WBP1LQ9NX94 342 aa23.32■■□□□ 1.32
USP53-203ENST00000507597 RBM27Q9P2N5 1060 aaKnown RBP23.32■■□□□ 1.32
USP53-203ENST00000507597 PRR12Q9ULL5 1215 aa23.32■■□□□ 1.32
USP53-203ENST00000507597 VWA5AO00534 786 aa23.31■■□□□ 1.32
USP53-203ENST00000507597 OAZ1P54368 228 aa23.31■■□□□ 1.32
USP53-203ENST00000507597 AKAP17AQ02040 695 aaKnown RBP23.31■■□□□ 1.32
USP53-203ENST00000507597 CRHR2Q13324 411 aa23.31■■□□□ 1.32
USP53-203ENST00000507597 ARHGEF6Q15052 776 aa23.31■■□□□ 1.32
USP53-203ENST00000507597 CCDC144CPQ8IYA2 1237 aa23.31■■□□□ 1.32
USP53-203ENST00000507597 GPRC5AQ8NFJ5 357 aa23.31■■□□□ 1.32
USP53-203ENST00000507597 SPZ1Q9BXG8 430 aa23.31■■□□□ 1.32
USP53-203ENST00000507597 FBXO28Q9NVF7 368 aa23.31■■□□□ 1.32
USP53-203ENST00000507597 ADAMTS5Q9UNA0 930 aa23.31■■□□□ 1.32
USP53-203ENST00000507597 RXRAP19793 462 aa23.3■■□□□ 1.32
USP53-203ENST00000507597 SLC16A2P36021 539 aa23.3■■□□□ 1.32
USP53-203ENST00000507597 KIF22Q14807 665 aa23.3■■□□□ 1.32
USP53-203ENST00000507597 FAM110CQ1W6H9 321 aa23.3■■□□□ 1.32
USP53-203ENST00000507597 NOM1Q5C9Z4 860 aaKnown RBP23.3■■□□□ 1.32
USP53-203ENST00000507597 TTBK2Q6IQ55 1244 aa23.3■■□□□ 1.32
USP53-203ENST00000507597 STAG2Q8N3U4 1231 aa23.3■■□□□ 1.32
USP53-203ENST00000507597 ATG4CQ96DT6 458 aa23.3■■□□□ 1.32
USP53-203ENST00000507597 UBA5Q9GZZ9 404 aa23.3■■□□□ 1.32
USP53-203ENST00000507597 SEC63Q9UGP8 760 aaKnown RBP23.3■■□□□ 1.32
USP53-203ENST00000507597 NID2Q14112 1375 aa23.29■■□□□ 1.32
USP53-203ENST00000507597 PFKFB2O60825 505 aa23.29■■□□□ 1.32
USP53-203ENST00000507597 TMTC3Q6ZXV5 915 aa23.29■■□□□ 1.32
USP53-203ENST00000507597 NOL8Q76FK4 1167 aaKnown RBP23.29■■□□□ 1.32
USP53-203ENST00000507597 ADGRF4Q8IZF3 695 aa23.29■■□□□ 1.32
USP53-203ENST00000507597 RRP36Q96EU6 259 aaKnown RBP23.29■■□□□ 1.32
USP53-203ENST00000507597 PAGR1Q9BTK6 254 aa23.29■■□□□ 1.32
USP53-203ENST00000507597 RIOX1Q9H6W3 641 aa23.29■■□□□ 1.32
USP53-203ENST00000507597 SLC38A10Q9HBR0 1119 aa23.29■■□□□ 1.32
USP53-203ENST00000507597 VAT1LQ9HCJ6 419 aa23.29■■□□□ 1.32
USP53-203ENST00000507597 TPCN1Q9ULQ1 816 aa23.29■■□□□ 1.32
USP53-203ENST00000507597 SLC25A27O95847 323 aa23.28■■□□□ 1.32
USP53-203ENST00000507597 CCT2P78371 535 aaKnown RBP23.28■■□□□ 1.32
USP53-203ENST00000507597 STK3Q13188 491 aa23.28■■□□□ 1.32
USP53-203ENST00000507597 C17orf99Q6UX52 265 aa23.28■■□□□ 1.32
USP53-203ENST00000507597 RAB11FIP4Q86YS3 637 aa23.28■■□□□ 1.32
USP53-203ENST00000507597 TRIM22Q8IYM9 498 aa23.28■■□□□ 1.32
USP53-203ENST00000507597 RANBP17Q9H2T7 1088 aaKnown RBP23.28■■□□□ 1.32
USP53-203ENST00000507597 CWC22Q9HCG8 908 aaKnown RBP23.28■■□□□ 1.32
USP53-203ENST00000507597 MORF4L1Q9UBU8 362 aa23.28■■□□□ 1.32
USP53-203ENST00000507597 ATP2A1O14983 1001 aa23.27■■□□□ 1.32
USP53-203ENST00000507597 TBC1D8O95759 1140 aa23.27■■□□□ 1.32
USP53-203ENST00000507597 STAT3P40763 770 aa23.27■■□□□ 1.32
USP53-203ENST00000507597 ERVK-9P63128 1117 aa23.27■■□□□ 1.32
USP53-203ENST00000507597 ERVK-24P63145 666 aa23.27■■□□□ 1.32
USP53-203ENST00000507597 PLS1Q14651 629 aa23.27■■□□□ 1.32
USP53-203ENST00000507597 TKFCQ3LXA3 575 aa23.27■■□□□ 1.32
USP53-203ENST00000507597 ANKRD13CQ8N6S4 541 aa23.27■■□□□ 1.32
USP53-203ENST00000507597 LARP6Q9BRS8 491 aaKnown RBP23.27■■□□□ 1.32
USP53-203ENST00000507597 TEX13BQ9BXU2 312 aa23.27■■□□□ 1.32
USP53-203ENST00000507597 HPS5Q9UPZ3 1129 aa23.27■■□□□ 1.32
USP53-203ENST00000507597 ADD1P35611 737 aaKnown RBP23.26■■□□□ 1.31
USP53-203ENST00000507597 RASGRP2Q7LDG7 609 aa23.26■■□□□ 1.31
USP53-203ENST00000507597 RBPJLQ9UBG7 517 aa23.26■■□□□ 1.31
USP53-203ENST00000507597 CPA4Q9UI42 421 aa23.26■■□□□ 1.31
USP53-203ENST00000507597 ZBTB5O15062 677 aa23.25■■□□□ 1.31
USP53-203ENST00000507597 BCRP11274 1271 aa23.25■■□□□ 1.31
USP53-203ENST00000507597 IFNAR1P17181 557 aa23.25■■□□□ 1.31
USP53-203ENST00000507597 SP3Q02447 781 aa23.25■■□□□ 1.31
USP53-203ENST00000507597 CDC37Q16543 378 aaPredicted RBP23.25■■□□□ 1.31
USP53-203ENST00000507597 ME3Q16798 604 aa23.25■■□□□ 1.31
USP53-203ENST00000507597 CPXCR1Q8N123 301 aa23.25■■□□□ 1.31
USP53-203ENST00000507597 SRBD1Q8N5C6 995 aaKnown RBP23.25■■□□□ 1.31
USP53-203ENST00000507597 SPATC1LQ9H0A9 340 aa23.25■■□□□ 1.31
USP53-203ENST00000507597 JMJD4Q9H9V9 463 aa23.25■■□□□ 1.31
USP53-203ENST00000507597 FBXO40Q9UH90 709 aa23.25■■□□□ 1.31
USP53-203ENST00000507597 PNMA6FA0A0J9YX94 578 aa23.24■■□□□ 1.31
USP53-203ENST00000507597 GPR25O00155 361 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms