RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ZNF205O95201 554 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 CAPNS1P04632 268 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 GSNP06396 782 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 RNASE1P07998 156 aaKnown RBP4.56□□□□□ -1.68
GYPB-207ENST00000506679 LTKP29376 864 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 EGR3Q06889 387 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 PLCL1Q15111 1095 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 ZNF792Q3KQV3 632 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 CRTC3Q6UUV7 619 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 TP53INP2Q8IXH6 220 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 FIBCD1Q8N539 461 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 BRF1Q92994 677 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 ALPK1Q96QP1 1244 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 GBP3Q9H0R5 595 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 PRDM7Q9NQW5 492 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 C19orf73Q9NVV2 129 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 SIRPGQ9P1W8 387 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 ADGRE2Q9UHX3 823 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 DIS3Q9Y2L1 958 aaKnown RBP4.56□□□□□ -1.68
GYPB-207ENST00000506679 R3HCC1Q9Y3T6 440 aaKnown RBP4.56□□□□□ -1.68
GYPB-207ENST00000506679 TMEM82A0PJX8 343 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 H0Y8X5 98 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 PPM1BO75688 479 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 NAT2P11245 290 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 VAV1P15498 845 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 CEBPAP49715 358 aaPredicted RBP4.55□□□□□ -1.68
GYPB-207ENST00000506679 GRB10Q13322 594 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 RASA3Q14644 834 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 SLC10A6Q3KNW5 377 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 RTP2Q5QGT7 225 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 NOL9Q5SY16 702 aaKnown RBP4.55□□□□□ -1.68
GYPB-207ENST00000506679 SOGA3Q5TF21 947 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 EEPD1Q7L9B9 569 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 KRTAP1-3Q8IUG1 177 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 MKL1Q969V6 931 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 ZNF669Q96BR6 464 aaPredicted RBP4.55□□□□□ -1.68
GYPB-207ENST00000506679 MRGPRX3Q96LB0 322 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 FGD4Q96M96 766 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 APBA2Q99767 749 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 G6PC3Q9BUM1 346 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 DSCC1Q9BVC3 393 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 TRIM55Q9BYV6 548 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 FOXP3Q9BZS1 431 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 EPN3Q9H201 632 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 NOL6Q9H6R4 1146 aaKnown RBP4.55□□□□□ -1.68
GYPB-207ENST00000506679 ST7Q9NRC1 585 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 CGGBP1Q9UFW8 167 aaPredicted RBP4.55□□□□□ -1.68
GYPB-207ENST00000506679 TCFL5Q9UL49 500 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 SF3B6Q9Y3B4 125 aaKnown RBP4.55□□□□□ -1.68
GYPB-207ENST00000506679 EMC9Q9Y3B6 208 aa4.55□□□□□ -1.68
GYPB-207ENST00000506679 DNAJC25-GNG10A0A024R161 153 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 ZGLP1P0C6A0 271 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 PCBP3P57721 371 aaKnown RBP4.54□□□□□ -1.68
GYPB-207ENST00000506679 RASGRF1Q13972 1273 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 RALGPS1Q5JS13 557 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 LRP10Q7Z4F1 713 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 NBPF11Q86T75 865 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 LRRN4CLQ8ND94 238 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 ST13P5Q8NFI4 369 aaPredicted RBP4.54□□□□□ -1.68
GYPB-207ENST00000506679 ADCY4Q8NFM4 1077 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 PI4K2BQ8TCG2 481 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 LINC01599Q8WXQ3 324 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 DNAJC2Q99543 621 aaKnown RBP4.54□□□□□ -1.68
GYPB-207ENST00000506679 SLC12A9Q9BXP2 914 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 CCDC113Q9H0I3 377 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 SP110Q9HB58 689 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 EBF1Q9UH73 591 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 TMEM59LQ9UK28 342 aa4.54□□□□□ -1.68
GYPB-207ENST00000506679 MEIS1O00470 390 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 SYPP08247 313 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 ENDOUP21128 410 aaKnown RBP4.53□□□□□ -1.68
GYPB-207ENST00000506679 GDNFP39905 211 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 ADAT2Q7Z6V5 191 aaKnown RBP4.53□□□□□ -1.68
GYPB-207ENST00000506679 ZNF227Q86WZ6 799 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 TRIM59Q8IWR1 403 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 BVESQ8NE79 360 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 FLAD1Q8NFF5 587 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 FCRL3Q96P31 734 aaPredicted RBP4.53□□□□□ -1.68
GYPB-207ENST00000506679 MCMBPQ9BTE3 642 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 ADAMTS10Q9H324 1103 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 SLAMF8Q9P0V8 285 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 CTNND2Q9UQB3 1225 aa4.53□□□□□ -1.68
GYPB-207ENST00000506679 U2SURPO15042 1029 aaKnown RBP4.52□□□□□ -1.69
GYPB-207ENST00000506679 PDPK1O15530 556 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 TBX1O43435 398 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 HPXP02790 462 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 ITGAVP06756 1048 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 ITGB5P18084 799 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 RANGAP1P46060 587 aaPredicted RBP4.52□□□□□ -1.69
GYPB-207ENST00000506679 POU4F1Q01851 419 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 CYP4F3Q08477 520 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 CWF19L1Q69YN2 538 aaKnown RBP4.52□□□□□ -1.69
GYPB-207ENST00000506679 POMZP3Q6PJE2 187 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 CRACR2BQ8N4Y2 399 aaPredicted RBP4.52□□□□□ -1.69
GYPB-207ENST00000506679 CCDC120Q96HB5 630 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 SGSM3Q96HU1 749 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 MAP6Q96JE9 813 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 FCRL2Q96LA5 508 aaPredicted RBP4.52□□□□□ -1.69
GYPB-207ENST00000506679 ZDHHC15Q96MV8 337 aa4.52□□□□□ -1.69
GYPB-207ENST00000506679 OSBPL2Q9H1P3 480 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms