RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 EMC9Q9Y3B6 208 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 DAGLAQ9Y4D2 1042 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 A0A087X0B3 334 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 SHOXO15266 292 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 PDE8AO60658 829 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 SLITRK5O94991 958 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 ALX3O95076 343 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 CAPNS1P04632 268 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 NFICP08651 508 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 PDGFRBP09619 1106 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 GLB1P16278 677 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 GRIA2P42262 883 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 PREPP48147 710 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 ZNF445P59923 1031 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 NFKB2Q00653 900 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 MAP7Q14244 749 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 NBPF9Q3BBW0 867 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 PLEKHG6Q3KR16 790 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 CDPF1Q6NVV7 123 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 NOL8Q76FK4 1167 aaKnown RBP4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 FERMT3Q86UX7 667 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 TRIM59Q8IWR1 403 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 ADCY4Q8NFM4 1077 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 RIN3Q8TB24 985 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 STAG1Q8WVM7 1258 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 OSBP2Q969R2 916 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 CCDC140Q96MF4 163 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 CEP89Q96ST8 783 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 IER2Q9BTL4 223 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 LGR4Q9BXB1 951 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 SEMA6CQ9H3T2 930 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 LGR6Q9HBX8 967 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 PRDM10Q9NQV6 1147 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 PRR13Q9NZ81 148 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 KLHL42Q9P2K6 505 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 MAPRE3Q9UPY8 281 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 FHOD1Q9Y613 1164 aa4.44□□□□□ -1.7
TRAPPC11-205ENST00000506426 COL17A1Q9UMD9 1497 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 C9orf172C9J069 976 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 KCNQ2O43526 872 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 EFCAB14O75071 495 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 KCNH1O95259 989 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 S100BP04271 92 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 CPEP16870 476 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 RXRBP28702 533 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 HOXC12P31275 282 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 GABREP78334 506 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 NRG1Q02297 640 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 MBTPS1Q14703 1052 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 PPP2R5DQ14738 602 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 CNNM4Q6P4Q7 775 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 LRRTM3Q86VH5 581 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 AHI1Q8N157 1196 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 PRPF38AQ8NAV1 312 aaKnown RBP4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 GIMAP7Q8NHV1 300 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 SYTL5Q8TDW5 730 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 FBLIM1Q8WUP2 373 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 BTN2A2Q8WVV5 523 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 KCTD13Q8WZ19 329 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 EZH1Q92800 747 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 BRF1Q92994 677 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 FAM46AQ96IP4 442 aaKnown RBP4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 COX4I2Q96KJ9 171 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 NACC1Q96RE7 527 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 NOL6Q9H6R4 1146 aaKnown RBP4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 CGGBP1Q9UFW8 167 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 SFMBT1Q9UHJ3 866 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 MCM8Q9UJA3 840 aa4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 SF3B6Q9Y3B4 125 aaKnown RBP4.43□□□□□ -1.7
TRAPPC11-205ENST00000506426 GSG1L2A8MUP6 293 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 ALG1L2C9J202 215 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 TBX1O43435 398 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 DLX3O60479 287 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 APPP05067 770 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 SDSP20132 328 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 KCNJ6P48051 423 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 MAP4K2Q12851 820 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 GRB10Q13322 594 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 UVSSAQ2YD98 709 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 TRIM61Q5EBN2 209 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 WWC2Q6AWC2 1192 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 GTF2IRD2BQ6EKJ0 949 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 Q6ZS46 218 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 DDX46Q7L014 1031 aaKnown RBP4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 RNF180Q86T96 592 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 GTF2IRD2Q86UP8 949 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 DDX42Q86XP3 938 aaKnown RBP eCLIP4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 JAMLQ86YT9 394 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 PPM1KQ8N3J5 372 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 FIBCD1Q8N539 461 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 UBR7Q8N806 425 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 WFDC12Q8WWY7 111 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 DDX1Q92499 740 aaKnown RBP4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 PTPRN2Q92932 1015 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 DSCC1Q9BVC3 393 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 TARS2Q9BW92 718 aaKnown RBP4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 PRDM14Q9GZV8 571 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 ASCC2Q9H1I8 757 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 NDOR1Q9UHB4 597 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms