RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 HSPA2P54652 639 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 DCTN1Q14203 1278 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 LONRF3Q496Y0 759 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 COX20Q5RI15 118 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 PACS1Q6VY07 963 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 CENPQQ7L2Z9 268 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 NSUN5Q96P11 429 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 HHIPQ96QV1 700 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 PAIP2Q9BPZ3 127 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 SLC4A7Q9Y6M7 1214 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 MYH15Q9Y2K3 1946 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 CAND2O75155 1236 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 TIE1P35590 1138 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 ID4P47928 161 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 CCNHP51946 323 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 HNRNPUQ00839 825 aaKnown RBP eCLIP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 CLUL1Q15846 466 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 SMCR8Q8TEV9 937 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 NUDT12Q9BQG2 462 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 SEZ6LQ9BYH1 1024 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 UNC93B1Q9H1C4 597 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 FKBPLQ9UIM3 349 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 BICDL2A1A5D9 508 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 DLL1O00548 723 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 TRAPPC10P48553 1259 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 TRIM28Q13263 835 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 IQCB1Q15051 598 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 RABEP1Q15276 862 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 TRIM71Q2Q1W2 868 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 SOGA3Q5TF21 947 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 ZKSCAN2Q63HK3 967 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 RCSD1Q6JBY9 416 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 SHQ1Q6PI26 577 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 AMIGO3Q86WK7 504 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 MYOCDQ8IZQ8 938 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 TTC16Q8NEE8 873 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 RAB24Q969Q5 203 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 THOC1Q96FV9 657 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 L3MBTL3Q96JM7 780 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 CHMP5Q9NZZ3 219 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 IP6K2Q9UHH9 426 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 MYH7P12883 1935 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 C19orf67A6NJJ6 358 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 MAP2K7O14733 419 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 ANP32CO43423 234 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 ICMTO60725 284 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 POTEIP0CG38 1075 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 POTEJP0CG39 1038 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 GCFC2P16383 781 aaKnown RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 GDF10P55107 478 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 ITKQ08881 620 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 G3BP1Q13283 466 aaKnown RBP eCLIP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 SPCS2Q15005 226 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 LLGL1Q15334 1064 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 PLEKHO1Q53GL0 409 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 C4orf48Q5BLP8 95 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 GORABQ5T7V8 394 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 INTS3Q68E01 1043 aaKnown RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 PRICKLE2Q7Z3G6 844 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 KRT77Q7Z794 578 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 GOLGA5Q8TBA6 731 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 TCP11Q8WWU5 503 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 C8orf76Q96K31 380 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 EGLN2Q96KS0 407 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 TMEM110-MUSTN1A8MSY1 372 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 SHOX2O60902 331 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 POLD1P28340 1107 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 FLT3P36888 993 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 ZNF132P52740 706 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 COL19A1Q14993 1142 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 HSP90AB2PQ58FF8 381 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 YOD1Q5VVQ6 348 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 KANK3Q6NY19 840 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 GET4Q7L5D6 327 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 PCGF5Q86SE9 256 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 CMIPQ8IY22 773 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 AZIN2Q96A70 460 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 DDX21Q9NR30 783 aaKnown RBP eCLIP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 HPS5Q9UPZ3 1129 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 SPDYE3A6NKU9 549 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 TP53P04637 393 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 C7P10643 843 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 PHKG2P15735 406 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 PECAM1P16284 738 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 WEE1P30291 646 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 PTGER2P43116 358 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 TMPRSS15P98073 1019 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 FOXC1Q12948 553 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 MTHFSDQ2M296 383 aaKnown RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 ALDH1L2Q3SY69 923 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 TEX11Q8IYF3 940 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 LSMEM2Q8N112 164 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 NCSTNQ92542 709 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 SH3GL3Q99963 347 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 PLA2G12BQ9BX93 195 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 RRP15Q9Y3B9 282 aaKnown RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 COL2A1P02458 1487 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-205ENST00000506154 NID2Q14112 1375 aa2.61□□□□□ -1.99
NEDD4-205ENST00000506154 SMAD7O15105 426 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms