RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 SPATC1LQ9H0A9 340 aa23.69■■□□□ 1.38
HERC6-205ENST00000504905 PORCNQ9H237 461 aa23.69■■□□□ 1.38
HERC6-205ENST00000504905 ERICH2A1L162 156 aa23.68■■□□□ 1.38
HERC6-205ENST00000504905 GRK4P32298 578 aa23.68■■□□□ 1.38
HERC6-205ENST00000504905 PRKCZQ05513 592 aa23.68■■□□□ 1.38
HERC6-205ENST00000504905 MB21D2Q8IYB1 491 aaPredicted RBP23.68■■□□□ 1.38
HERC6-205ENST00000504905 PNMA1Q8ND90 353 aa23.68■■□□□ 1.38
HERC6-205ENST00000504905 CTDP1Q9Y5B0 961 aaPredicted RBP23.68■■□□□ 1.38
HERC6-205ENST00000504905 IFIT3O14879 490 aaKnown RBP23.67■■□□□ 1.38
HERC6-205ENST00000504905 PDHBP11177 359 aa23.67■■□□□ 1.38
HERC6-205ENST00000504905 ZKSCAN1P17029 563 aaPredicted RBP23.67■■□□□ 1.38
HERC6-205ENST00000504905 GJA8P48165 433 aa23.67■■□□□ 1.38
HERC6-205ENST00000504905 TMEM132BQ14DG7 1078 aa23.67■■□□□ 1.38
HERC6-205ENST00000504905 SEC23AQ15436 765 aa23.67■■□□□ 1.38
HERC6-205ENST00000504905 WDR78Q5VTH9 848 aa23.67■■□□□ 1.38
HERC6-205ENST00000504905 UBE2Q1Q7Z7E8 422 aa23.67■■□□□ 1.38
HERC6-205ENST00000504905 RAET1EQ8TD07 263 aa23.67■■□□□ 1.38
HERC6-205ENST00000504905 MOV10L1Q9BXT6 1211 aaKnown RBP23.67■■□□□ 1.38
HERC6-205ENST00000504905 GABRQQ9UN88 632 aa23.67■■□□□ 1.38
HERC6-205ENST00000504905 SZT2Q5T011 3432 aa23.66■■□□□ 1.38
HERC6-205ENST00000504905 PLA2G6O60733 806 aa23.66■■□□□ 1.38
HERC6-205ENST00000504905 ZBED4O75132 1171 aa23.66■■□□□ 1.38
HERC6-205ENST00000504905 GJB1P08034 283 aa23.66■■□□□ 1.38
HERC6-205ENST00000504905 FLT3LGP49771 235 aa23.66■■□□□ 1.38
HERC6-205ENST00000504905 CHRDL2Q6WN34 429 aa23.66■■□□□ 1.38
HERC6-205ENST00000504905 CHST3Q7LGC8 479 aa23.66■■□□□ 1.38
HERC6-205ENST00000504905 GPR142Q7Z601 462 aa23.66■■□□□ 1.38
HERC6-205ENST00000504905 DPF3Q92784 378 aa23.66■■□□□ 1.38
HERC6-205ENST00000504905 TRIOBPQ9H2D6 2365 aa23.66■■□□□ 1.38
HERC6-205ENST00000504905 FRMPD2Q68DX3 1309 aaPredicted RBP23.65■■□□□ 1.38
HERC6-205ENST00000504905 MCM5P33992 734 aa23.65■■□□□ 1.38
HERC6-205ENST00000504905 ANTXR2P58335 489 aa23.65■■□□□ 1.38
HERC6-205ENST00000504905 PLEKHH3Q7Z736 793 aa23.65■■□□□ 1.38
HERC6-205ENST00000504905 REPS2Q8NFH8 660 aa23.65■■□□□ 1.38
HERC6-205ENST00000504905 GPCPD1Q9NPB8 672 aa23.65■■□□□ 1.38
HERC6-205ENST00000504905 PLXNB2O15031 1838 aa23.65■■□□□ 1.38
HERC6-205ENST00000504905 SNHG28P0DPA3 235 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 FDX1P10109 184 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 CCL5P13501 91 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 ZNF543Q08ER8 600 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 KRT32Q14532 448 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 WTAPQ15007 396 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 TSGA10IPQ3SY00 556 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 TMEM67Q5HYA8 995 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 RASEFQ8IZ41 740 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 SHCBP1Q8NEM2 672 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 SLC38A10Q9HBR0 1119 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 ZNF214Q9UL59 606 aaPredicted RBP23.64■■□□□ 1.37
HERC6-205ENST00000504905 IVNS1ABPQ9Y6Y0 642 aa23.64■■□□□ 1.37
HERC6-205ENST00000504905 EPB41L2O43491 1005 aaKnown RBP23.63■■□□□ 1.37
HERC6-205ENST00000504905 PRC1O43663 620 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 SLC25A27O95847 323 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 ERCC3P19447 782 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 HSPA4P34932 840 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 STAT3P40763 770 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 RANBP2P49792 3224 aaKnown RBP23.63■■□□□ 1.37
HERC6-205ENST00000504905 GPATCH4Q5T3I0 446 aaKnown RBP23.63■■□□□ 1.37
HERC6-205ENST00000504905 TTBK2Q6IQ55 1244 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 NCAPG2Q86XI2 1143 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 SOCS4Q8WXH5 440 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 NUDT12Q9BQG2 462 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 MTA3Q9BTC8 594 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 HTATIP2Q9BUP3 242 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 RBM27Q9P2N5 1060 aaKnown RBP23.63■■□□□ 1.37
HERC6-205ENST00000504905 GJD2Q9UKL4 321 aa23.63■■□□□ 1.37
HERC6-205ENST00000504905 IRF5Q13568 498 aa23.62■■□□□ 1.37
HERC6-205ENST00000504905 BTNL9Q6UXG8 535 aa23.62■■□□□ 1.37
HERC6-205ENST00000504905 RIOX2Q8IUF8 465 aa23.62■■□□□ 1.37
HERC6-205ENST00000504905 CPXCR1Q8N123 301 aa23.62■■□□□ 1.37
HERC6-205ENST00000504905 NEK1Q96PY6 1258 aa23.62■■□□□ 1.37
HERC6-205ENST00000504905 TEX13BQ9BXU2 312 aa23.62■■□□□ 1.37
HERC6-205ENST00000504905 RNF208Q9H0X6 261 aa23.62■■□□□ 1.37
HERC6-205ENST00000504905 MROH8Q9H579 483 aa23.62■■□□□ 1.37
HERC6-205ENST00000504905 PRR12Q9ULL5 1215 aa23.62■■□□□ 1.37
HERC6-205ENST00000504905 ATP2A1O14983 1001 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 COPB2P35606 906 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 SLC16A2P36021 539 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 OAZ1P54368 228 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 UBXN2AP68543 259 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 ASPRV1Q53RT3 343 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 SYDE2Q5VT97 1194 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 SNRNP48Q6IEG0 339 aaKnown RBP23.61■■□□□ 1.37
HERC6-205ENST00000504905 IGDCC4Q8TDY8 1250 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 KCNB2Q92953 911 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 TMEM87BQ96K49 555 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 PRO3102Q9H379 93 aa23.61■■□□□ 1.37
HERC6-205ENST00000504905 SLC15A5A6NIM6 579 aa23.6■■□□□ 1.37
HERC6-205ENST00000504905 ADCY3O60266 1144 aa23.6■■□□□ 1.37
HERC6-205ENST00000504905 PARP1P09874 1014 aaKnown RBP23.6■■□□□ 1.37
HERC6-205ENST00000504905 GOLGA8HP0CJ92 632 aa23.6■■□□□ 1.37
HERC6-205ENST00000504905 PTPREP23469 700 aa23.6■■□□□ 1.37
HERC6-205ENST00000504905 ADCK5Q3MIX3 580 aa23.6■■□□□ 1.37
HERC6-205ENST00000504905 MORN1Q5T089 497 aa23.6■■□□□ 1.37
HERC6-205ENST00000504905 SLAIN1Q8ND83 568 aa23.6■■□□□ 1.37
HERC6-205ENST00000504905 USP26Q9BXU7 913 aa23.6■■□□□ 1.37
HERC6-205ENST00000504905 SENP2Q9HC62 589 aa23.6■■□□□ 1.37
HERC6-205ENST00000504905 RAVER2Q9HCJ3 691 aaKnown RBP23.6■■□□□ 1.37
HERC6-205ENST00000504905 BIN2Q9UBW5 565 aaPredicted RBP23.6■■□□□ 1.37
HERC6-205ENST00000504905 STRNO43815 780 aa23.59■■□□□ 1.37
HERC6-205ENST00000504905 RGS2P41220 211 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms