RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 SNAP25P60880 206 aa16.83■□□□□ 0.28
HOXC9-202ENST00000504557 MFSD14CQ5VZR4 134 aa16.83■□□□□ 0.28
HOXC9-202ENST00000504557 PRPF38AQ8NAV1 312 aaKnown RBP16.83■□□□□ 0.28
HOXC9-202ENST00000504557 DPF3Q92784 378 aa16.83■□□□□ 0.28
HOXC9-202ENST00000504557 RAVER2Q9HCJ3 691 aaKnown RBP16.83■□□□□ 0.28
HOXC9-202ENST00000504557 FEM1BQ9UK73 627 aa16.83■□□□□ 0.28
HOXC9-202ENST00000504557 ADAMTS5Q9UNA0 930 aa16.83■□□□□ 0.28
HOXC9-202ENST00000504557 STRNO43815 780 aa16.82■□□□□ 0.28
HOXC9-202ENST00000504557 COBLO75128 1261 aa16.82■□□□□ 0.28
HOXC9-202ENST00000504557 SLC25A27O95847 323 aa16.82■□□□□ 0.28
HOXC9-202ENST00000504557 PPP4R3BQ5MIZ7 849 aa16.82■□□□□ 0.28
HOXC9-202ENST00000504557 RIOX2Q8IUF8 465 aa16.82■□□□□ 0.28
HOXC9-202ENST00000504557 DIS3LQ8TF46 1054 aaKnown RBP16.82■□□□□ 0.28
HOXC9-202ENST00000504557 STAG1Q8WVM7 1258 aa16.82■□□□□ 0.28
HOXC9-202ENST00000504557 HOMER2Q9NSB8 354 aa16.82■□□□□ 0.28
HOXC9-202ENST00000504557 ZNF214Q9UL59 606 aaPredicted RBP16.82■□□□□ 0.28
HOXC9-202ENST00000504557 ALPK3Q96L96 1907 aa16.82■□□□□ 0.28
HOXC9-202ENST00000504557 FRMPD2Q68DX3 1309 aaPredicted RBP16.81■□□□□ 0.28
HOXC9-202ENST00000504557 STAT2P52630 851 aa16.81■□□□□ 0.28
HOXC9-202ENST00000504557 KCTD2Q14681 263 aa16.81■□□□□ 0.28
HOXC9-202ENST00000504557 IMMTQ16891 758 aaKnown RBP16.81■□□□□ 0.28
HOXC9-202ENST00000504557 CCDC174Q6PII3 467 aa16.81■□□□□ 0.28
HOXC9-202ENST00000504557 REPS2Q8NFH8 660 aa16.81■□□□□ 0.28
HOXC9-202ENST00000504557 DSCC1Q9BVC3 393 aa16.81■□□□□ 0.28
HOXC9-202ENST00000504557 TEX13BQ9BXU2 312 aa16.81■□□□□ 0.28
HOXC9-202ENST00000504557 RNF41Q9H4P4 317 aaPredicted RBP16.81■□□□□ 0.28
HOXC9-202ENST00000504557 RIPK3Q9Y572 518 aa16.81■□□□□ 0.28
HOXC9-202ENST00000504557 MYH6P13533 1939 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 B4E1Z4 1266 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 KDM4AO75164 1064 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 FGRP09769 529 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 CHMLP26374 656 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 MAP3K21Q5TCX8 1036 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 PRPF38BQ5VTL8 546 aaKnown RBP16.8■□□□□ 0.28
HOXC9-202ENST00000504557 RUFY2Q8WXA3 655 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 ESR2Q92731 530 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 PAWRQ96IZ0 340 aaKnown RBP16.8■□□□□ 0.28
HOXC9-202ENST00000504557 TMEM47Q9BQJ4 181 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 GPCPD1Q9NPB8 672 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 SLC5A4Q9NY91 659 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 SYNPO2Q9UMS6 1093 aa16.8■□□□□ 0.28
HOXC9-202ENST00000504557 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
HOXC9-202ENST00000504557 TOP1P11387 765 aaKnown RBP16.79■□□□□ 0.28
HOXC9-202ENST00000504557 SLC16A2P36021 539 aa16.79■□□□□ 0.28
HOXC9-202ENST00000504557 PRAMEF19Q5SWL8 479 aa16.79■□□□□ 0.28
HOXC9-202ENST00000504557 ANO1Q5XXA6 986 aa16.79■□□□□ 0.28
HOXC9-202ENST00000504557 RCSD1Q6JBY9 416 aa16.79■□□□□ 0.28
HOXC9-202ENST00000504557 CHURC1Q8WUH1 139 aa16.79■□□□□ 0.28
HOXC9-202ENST00000504557 DDX11Q96FC9 970 aa16.79■□□□□ 0.28
HOXC9-202ENST00000504557 GMCL1Q96IK5 515 aa16.79■□□□□ 0.28
HOXC9-202ENST00000504557 CTNNA3Q9UI47 895 aa16.79■□□□□ 0.28
HOXC9-202ENST00000504557 HOXC6P09630 235 aa16.78■□□□□ 0.28
HOXC9-202ENST00000504557 PTH1RQ03431 593 aa16.78■□□□□ 0.28
HOXC9-202ENST00000504557 TTBK2Q6IQ55 1244 aa16.78■□□□□ 0.28
HOXC9-202ENST00000504557 CENPQQ7L2Z9 268 aaPredicted RBP16.78■□□□□ 0.28
HOXC9-202ENST00000504557 FAM160B2Q86V87 743 aa16.78■□□□□ 0.28
HOXC9-202ENST00000504557 TRPV1Q8NER1 839 aa16.78■□□□□ 0.28
HOXC9-202ENST00000504557 MAML3Q96JK9 1138 aa16.78■□□□□ 0.28
HOXC9-202ENST00000504557 CRISPLD2Q9H0B8 497 aa16.78■□□□□ 0.28
HOXC9-202ENST00000504557 SLC38A10Q9HBR0 1119 aa16.78■□□□□ 0.28
HOXC9-202ENST00000504557 CEP290O15078 2479 aa16.77■□□□□ 0.28
HOXC9-202ENST00000504557 RAD50Q92878 1312 aa16.77■□□□□ 0.28
HOXC9-202ENST00000504557 PCP11498 1178 aaKnown RBP16.77■□□□□ 0.28
HOXC9-202ENST00000504557 TAL1P17542 331 aaPredicted RBP16.77■□□□□ 0.28
HOXC9-202ENST00000504557 COPB2P35606 906 aa16.77■□□□□ 0.28
HOXC9-202ENST00000504557 ABRAQ8N0Z2 381 aa16.77■□□□□ 0.28
HOXC9-202ENST00000504557 DCAF4Q8WV16 495 aa16.77■□□□□ 0.28
HOXC9-202ENST00000504557 AGBL1Q96MI9 1066 aa16.77■□□□□ 0.28
HOXC9-202ENST00000504557 HTATIP2Q9BUP3 242 aa16.77■□□□□ 0.28
HOXC9-202ENST00000504557 PRR12Q9ULL5 1215 aa16.77■□□□□ 0.28
HOXC9-202ENST00000504557 ALAS1P13196 640 aa16.76■□□□□ 0.27
HOXC9-202ENST00000504557 OLFML2BQ68BL8 750 aa16.76■□□□□ 0.27
HOXC9-202ENST00000504557 NECAB2Q7Z6G3 386 aa16.76■□□□□ 0.27
HOXC9-202ENST00000504557 IQCA1Q86XH1 822 aa16.76■□□□□ 0.27
HOXC9-202ENST00000504557 ANKRD35Q8N283 1001 aa16.76■□□□□ 0.27
HOXC9-202ENST00000504557 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
HOXC9-202ENST00000504557 TCP11L1Q9NUJ3 509 aa16.76■□□□□ 0.27
HOXC9-202ENST00000504557 GOLGA8HP0CJ92 632 aa16.75■□□□□ 0.27
HOXC9-202ENST00000504557 CYBAP13498 195 aa16.75■□□□□ 0.27
HOXC9-202ENST00000504557 LHX8Q68G74 356 aa16.75■□□□□ 0.27
HOXC9-202ENST00000504557 UBE2Q1Q7Z7E8 422 aa16.75■□□□□ 0.27
HOXC9-202ENST00000504557 RNF146Q9NTX7 359 aa16.75■□□□□ 0.27
HOXC9-202ENST00000504557 DDX20Q9UHI6 824 aaKnown RBP16.75■□□□□ 0.27
HOXC9-202ENST00000504557 OGDHLQ9ULD0 1010 aa16.75■□□□□ 0.27
HOXC9-202ENST00000504557 H0YGN5 161 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 SGSM2O43147 1006 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 NEFLP07196 543 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 PDHBP11177 359 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 NOVP48745 357 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 ZNF792Q3KQV3 632 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 UBAC1Q9BSL1 405 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 KRT23Q9C075 422 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 C11orf49Q9H6J7 331 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 KAT14Q9H8E8 782 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 ZSWIM5Q9P217 1185 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 CCPG1Q9ULG6 757 aa16.74■□□□□ 0.27
HOXC9-202ENST00000504557 TNKSO95271 1327 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 ATP2A1O14983 1001 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 EVI5O60447 810 aa16.73■□□□□ 0.27
HOXC9-202ENST00000504557 OAZ1P54368 228 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms