RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 CADPSQ9ULU8 1353 aa7.21□□□□□ -1.25
TRAPPC13-205ENST00000504243 H3BS24 57 aa7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 NOP56O00567 594 aaKnown RBP7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 ITGA4P13612 1032 aa7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 CD247P20963 164 aa7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 ZNF143P52747 638 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 IKZF1Q13422 519 aa7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 SLC10A6Q3KNW5 377 aa7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 ZNF574Q6ZN55 896 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 NLGN1Q8N2Q7 840 aa7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 DTWD2Q8NBA8 298 aa7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 DSCC1Q9BVC3 393 aa7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 SPATA9Q9BWV2 254 aa7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 COL17A1Q9UMD9 1497 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC13-205ENST00000504243 MEIS1O00470 390 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 FUT4P22083 530 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 PPP2R5DQ14738 602 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 WFDC3Q8IUB2 231 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 THAP3Q8WTV1 239 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 BRF1Q92994 677 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 VWCEQ96DN2 955 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 IPO9Q96P70 1041 aaKnown RBP7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 GPR62Q9BZJ7 368 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 GP6Q9HCN6 339 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 FANCLQ9NW38 375 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 GPATCH2Q9NW75 528 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 LMCD1Q9NZU5 365 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 AKT3Q9Y243 479 aa7.2□□□□□ -1.26
TRAPPC13-205ENST00000504243 ESYT3A0FGR9 886 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 CBFA2T2O43439 604 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 CDC45O75419 566 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 PLCL1Q15111 1095 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 CLEC16AQ2KHT3 1053 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 NBPF9Q3BBW0 867 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 C2orf27AQ580R0 203 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 TMPRSS7Q7RTY8 843 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 HOMER1Q86YM7 354 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 ABI1Q8IZP0 508 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 APPBP2Q92624 585 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 UBE2FQ969M7 185 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 CDC6Q99741 560 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 PRDM14Q9GZV8 571 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 KLHL25Q9H0H3 589 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 NOL6Q9H6R4 1146 aaKnown RBP7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 KANSL2Q9H9L4 492 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 GFOD1Q9NXC2 390 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 WHRNQ9P202 907 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 ZSWIM5Q9P217 1185 aa7.19□□□□□ -1.26
TRAPPC13-205ENST00000504243 RBAK-RBAKDNI3L0D1 243 aa7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 CD96P40200 585 aa7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 IRAK1P51617 712 aa7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 ANKRD39Q53RE8 183 aa7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 PI4K2BQ8TCG2 481 aa7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 ZNF669Q96BR6 464 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 LGR4Q9BXB1 951 aa7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 DUSP15Q9H1R2 295 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 ATP13A1Q9HD20 1204 aa7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 APEX2Q9UBZ4 518 aa7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 SUSD2Q9UGT4 822 aa7.18□□□□□ -1.26
TRAPPC13-205ENST00000504243 ITGAVP06756 1048 aa7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 FAM153BP0C7A2 387 aa7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 SRFP11831 508 aa7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 HSD3B2P26439 372 aa7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 ZP2Q05996 745 aa7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 SNW1Q13573 536 aaKnown RBP7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 HSP90AA2PQ14568 343 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 SLC23A3Q6PIS1 610 aa7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 CRACR2BQ8N4Y2 399 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 BVESQ8NE79 360 aa7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 ENOX1Q8TC92 643 aaKnown RBP7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 ZDHHC15Q96MV8 337 aa7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 SLKQ9H2G2 1235 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 PTCH2Q9Y6C5 1203 aa7.17□□□□□ -1.26
TRAPPC13-205ENST00000504243 A0A1W2PQU0 124 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 ANKRD62A6NC57 917 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 KCNH1O95259 989 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 TPP2P29144 1249 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 ZNF445P59923 1031 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 NMIQ13287 307 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 POMZP3Q6PJE2 187 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 TMC3Q7Z5M5 1100 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 TSPYL5Q86VY4 417 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 FIBCD1Q8N539 461 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 ZBTB38Q8NAP3 1195 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 ZSWIM2Q8NEG5 633 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 SGSM3Q96HU1 749 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 CHST7Q9NS84 486 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 ADGRE2Q9UHX3 823 aa7.16□□□□□ -1.26
TRAPPC13-205ENST00000504243 TRAV20A0A0B4J274 112 aa7.15□□□□□ -1.26
TRAPPC13-205ENST00000504243 SHOXO15266 292 aa7.15□□□□□ -1.26
TRAPPC13-205ENST00000504243 PRAMEF1O95521 474 aa7.15□□□□□ -1.26
TRAPPC13-205ENST00000504243 SQSTM1Q13501 440 aa7.15□□□□□ -1.26
TRAPPC13-205ENST00000504243 CWF19L1Q69YN2 538 aaKnown RBP7.15□□□□□ -1.26
TRAPPC13-205ENST00000504243 ZNF227Q86WZ6 799 aa7.15□□□□□ -1.26
TRAPPC13-205ENST00000504243 CCDC120Q96HB5 630 aa7.15□□□□□ -1.26
TRAPPC13-205ENST00000504243 SLC26A8Q96RN1 970 aa7.15□□□□□ -1.26
TRAPPC13-205ENST00000504243 AARSD1Q9BTE6 412 aaKnown RBP7.15□□□□□ -1.26
TRAPPC13-205ENST00000504243 SF3B6Q9Y3B4 125 aaKnown RBP7.15□□□□□ -1.26
TRAPPC13-205ENST00000504243 ENPP3O14638 875 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms