RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TNIP3Q96KP6 325 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 C8orf48Q96LL4 319 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 RIOK1Q9BRS2 568 aaKnown RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 DMGDHQ9UI17 866 aaKnown RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 EXOC7Q9UPT5 735 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 M0R2C6 588 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 ST18O60284 1047 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 HALP42357 657 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 CTCFP49711 727 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 HAND2P61296 217 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 CCDC153Q494R4 210 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 ZC3H12BQ5HYM0 836 aaKnown RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 HDXQ7Z353 690 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 FSD2A1L4K1 749 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 MYCP01106 439 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 KRT8P05787 483 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 LONP1P36776 959 aaKnown RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 ARL1P40616 181 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 SCRN3Q0VDG4 424 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 RASA2Q15283 850 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 OASLQ15646 514 aaKnown RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 KANK3Q6NY19 840 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 BTNL9Q6UXG8 535 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 PRR23CQ6ZRP0 262 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 CFAP36Q96G28 342 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 SPACA7Q96KW9 195 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 ADNPQ9H2P0 1102 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 TMED5Q9Y3A6 229 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 ANKRD30AQ9BXX3 1397 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 TRIM43BA6NCK2 446 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 TSC22D2O75157 780 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 IGHDP01880 384 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 PRKACAP17612 351 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 ACAT1P24752 427 aaKnown RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 CACTIN-AS1Q8N1I8 211 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 TOR1AIP2Q8NFQ8 470 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 GAS2L2Q8NHY3 880 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 DPF3Q92784 378 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 OSBPL1AQ9BXW6 950 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 PARD6BQ9BYG5 372 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 POLA1P09884 1462 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 SMG6Q86US8 1419 aaKnown RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 RSPH10B2B2RC85 870 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 TSPAN1O60635 241 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 RTN3O95197 1032 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 RSPH10BP0C881 870 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 IGHMBP2P38935 993 aaKnown RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 TRIM14Q14142 442 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 ANKRD13DQ6ZTN6 518 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 NEK9Q8TD19 979 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 SENP7Q9BQF6 1050 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 NUDT16L1Q9BRJ7 211 aaKnown RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 ZWILCHQ9H900 591 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 ATP11BQ9Y2G3 1177 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 EIF3AQ14152 1382 aaKnown RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 E9PMD0 336 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 HSMCR30P0CW71 290 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 ZSCAN22P10073 491 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 PPP2R3AQ06190 1150 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 EXOSC9Q06265 439 aaKnown RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 C11orf91Q3C1V1 193 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 HVCN1Q96D96 273 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 LRGUKQ96M69 825 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 ALG1Q9BT22 464 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 A0A1W2PRQ8 180 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 F8W031 263 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 ACSL4O60488 711 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 NOL3O60936 208 aaKnown RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 POLR3DP05423 398 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 GSCP56915 257 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 KCNB1Q14721 858 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 RALYLQ86SE5 291 aaKnown RBP6.86□□□□□ -1.31
CLCN3-204ENST00000504131 CUL5Q93034 780 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 OLFM3Q96PB7 478 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 TCP11L1Q9NUJ3 509 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 PARVAQ9NVD7 372 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 SH3GLB1Q9Y371 365 aa6.86□□□□□ -1.31
CLCN3-204ENST00000504131 CFAP69A5D8W1 941 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 PSMD14O00487 310 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 SRGAP3O43295 1099 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ZBTB43O43298 467 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 CYTH3O43739 400 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ZKSCAN1P17029 563 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 SOX5P35711 763 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 CCT5P48643 541 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ROR2Q01974 943 aaKnown RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 SUZ12Q15022 739 aaKnown RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 THEMIS2Q5TEJ8 643 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 NLRP14Q86W24 1093 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 TRIM22Q8IYM9 498 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ZNF713Q8N859 430 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ATP2A3Q93084 1043 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 DCAF16Q9NXF7 216 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 RWDD3Q9Y3V2 267 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 GAS8O95995 478 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 CLUP10909 449 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 HDAC4P56524 1084 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 MLLT1Q03111 559 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 POU5F1BQ06416 359 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 IFRD2Q12894 506 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms