RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 LCE2BO14633 110 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 PFKFB2O60825 505 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 GH2P01242 217 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 FKBP1BP68106 108 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 SEC23AQ15436 765 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 ZNF654Q8IZM8 581 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 PNMA1Q8ND90 353 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 NUP133Q8WUM0 1156 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 CDCA5Q96FF9 252 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 CEP95Q96GE4 821 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 MAP3K14Q99558 947 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 LLPHQ9BRT6 129 aaKnown RBP10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 DNAJC18Q9H819 358 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 CWC22Q9HCG8 908 aaKnown RBP10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 CLIP2Q9UDT6 1046 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 ZBTB21Q9ULJ3 1066 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 TPCN1Q9ULQ1 816 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 USP17L5A8MUK1 530 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 ADM5C9JUS6 153 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 RNF223E7ERA6 249 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 SMIM22K7EJ46 135 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 GDF11O95390 407 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 PDIA3P30101 505 aaKnown RBP10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 SLC19A1P41440 591 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 USP14P54578 494 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 HMGN5P82970 282 aaKnown RBP10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 AKAP17AQ02040 695 aaKnown RBP10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 STK3Q13188 491 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 RTN1Q16799 776 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 APOA5Q6Q788 366 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 MICU3Q86XE3 530 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 ANKRD13AQ8IZ07 590 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 SCYL3Q8IZE3 742 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 C2orf69Q8N8R5 385 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 MKL1Q969V6 931 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 KLRG1Q96E93 195 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 LZTS2Q9BRK4 669 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 GLIS2Q9BZE0 524 aaPredicted RBP10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 NMRK2Q9NPI5 230 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 IL17RBQ9NRM6 502 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 ZNF112Q9UJU3 913 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 SCAF8Q9UPN6 1271 aaKnown RBP10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 SMC3Q9UQE7 1217 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 TACC3Q9Y6A5 838 aa10.72□□□□□ -0.69
ARHGEF28-206ENST00000504003 IGKV6D-41A0A0C4DH26 115 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 PHF20L1A8MW92 1017 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 TLL1O43897 1013 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 RAD21O60216 631 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 NMT2O60551 498 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 NR1I2O75469 434 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 OATP04181 439 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 PARP1P09874 1014 aaKnown RBP10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 EEF2P13639 858 aaKnown RBP10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 SEPT2Q15019 361 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 ME3Q16798 604 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 MAP1SQ66K74 1059 aaPredicted RBP10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 RCSD1Q6JBY9 416 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 TRIM22Q8IYM9 498 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 ANKLE1Q8NAG6 615 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 FAM184AQ8NB25 1140 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 FANCBQ8NB91 859 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 GTF3C6Q969F1 213 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 ATAD5Q96QE3 1844 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 FEZ1Q99689 392 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 TMEM47Q9BQJ4 181 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 MYH4Q9Y623 1939 aa10.71□□□□□ -0.69
ARHGEF28-206ENST00000504003 DOCK1Q14185 1865 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 USP2O75604 605 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 CD2BP2O95400 341 aaKnown RBP10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 PDCP20941 246 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 NOVP48745 357 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 CCT2P78371 535 aaKnown RBP10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 CUL4AQ13619 759 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 PRKG1Q13976 671 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 ASPRV1Q53RT3 343 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 NOL9Q5SY16 702 aaKnown RBP10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 GPATCH4Q5T3I0 446 aaKnown RBP10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 PRAMEF18Q5VWM3 479 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 CCDC83Q8IWF9 413 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 SMC1BQ8NDV3 1235 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 DCAF4Q8WV16 495 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 WASF1Q92558 559 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 ZNF408Q9H9D4 720 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 BRPF3Q9ULD4 1205 aa10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 ISY1Q9ULR0 285 aaKnown RBP10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 GREB1LQ9C091 1923 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF28-206ENST00000504003 NID2Q14112 1375 aa10.69□□□□□ -0.7
ARHGEF28-206ENST00000504003 C19orf81C9J6K1 198 aa10.69□□□□□ -0.7
ARHGEF28-206ENST00000504003 USP17L10C9JJH3 530 aa10.69□□□□□ -0.7
ARHGEF28-206ENST00000504003 XBP1P17861 261 aa10.69□□□□□ -0.7
ARHGEF28-206ENST00000504003 SSRP1Q08945 709 aaKnown RBP10.69□□□□□ -0.7
ARHGEF28-206ENST00000504003 MAP3K11Q16584 847 aa10.69□□□□□ -0.7
ARHGEF28-206ENST00000504003 GMCL1P1Q8NEA9 526 aa10.69□□□□□ -0.7
ARHGEF28-206ENST00000504003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.69□□□□□ -0.77e-6■■■□□ 14.8
ARHGEF28-206ENST00000504003 LPAR1Q92633 364 aa10.69□□□□□ -0.7
ARHGEF28-206ENST00000504003 TMX2Q9Y320 296 aa10.69□□□□□ -0.7
ARHGEF28-206ENST00000504003 F5H6K3 240 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 ADH1BP00325 375 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 SMARCA1P28370 1054 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 INPP5BP32019 993 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms