RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 NT5DC4Q86YG4 428 aa7.16□□□□□ -1.26
UBE3D-205ENST00000503942 LINC01356Q8N9X3 169 aa7.16□□□□□ -1.26
UBE3D-205ENST00000503942 HHIPL1Q96JK4 782 aa7.16□□□□□ -1.26
UBE3D-205ENST00000503942 HDAC8Q9BY41 377 aa7.16□□□□□ -1.26
UBE3D-205ENST00000503942 ZMYM5Q9UJ78 669 aa7.16□□□□□ -1.26
UBE3D-205ENST00000503942 TMEM82A0PJX8 343 aa7.15□□□□□ -1.26
UBE3D-205ENST00000503942 RLBP1P12271 317 aa7.15□□□□□ -1.26
UBE3D-205ENST00000503942 ERMP1Q7Z2K6 904 aa7.15□□□□□ -1.26
UBE3D-205ENST00000503942 CCDC84Q86UT8 332 aaPredicted RBP7.15□□□□□ -1.26
UBE3D-205ENST00000503942 IGDCC3Q8IVU1 814 aa7.15□□□□□ -1.26
UBE3D-205ENST00000503942 USHBP1Q8N6Y0 703 aa7.15□□□□□ -1.26
UBE3D-205ENST00000503942 VWCEQ96DN2 955 aa7.15□□□□□ -1.26
UBE3D-205ENST00000503942 CCDC74BQ96LY2 380 aa7.15□□□□□ -1.26
UBE3D-205ENST00000503942 ASCC2Q9H1I8 757 aaPredicted RBP7.15□□□□□ -1.26
UBE3D-205ENST00000503942 TLR6Q9Y2C9 796 aa7.15□□□□□ -1.26
UBE3D-205ENST00000503942 CILPO75339 1184 aa7.14□□□□□ -1.27
UBE3D-205ENST00000503942 ZXDCQ2QGD7 858 aaPredicted RBP7.14□□□□□ -1.27
UBE3D-205ENST00000503942 DIEXFQ68CQ4 756 aaKnown RBP7.14□□□□□ -1.27
UBE3D-205ENST00000503942 PLCD4Q9BRC7 762 aa7.14□□□□□ -1.27
UBE3D-205ENST00000503942 NOC4LQ9BVI4 516 aaKnown RBP7.14□□□□□ -1.27
UBE3D-205ENST00000503942 FOXP3Q9BZS1 431 aa7.14□□□□□ -1.27
UBE3D-205ENST00000503942 PRR36Q9H6K5 1346 aa7.14□□□□□ -1.27
UBE3D-205ENST00000503942 COPRSQ9NQ92 184 aa7.14□□□□□ -1.27
UBE3D-205ENST00000503942 REV1Q9UBZ9 1251 aa7.14□□□□□ -1.27
UBE3D-205ENST00000503942 GGT7Q9UJ14 662 aa7.14□□□□□ -1.27
UBE3D-205ENST00000503942 BPNT1O95861 308 aa7.13□□□□□ -1.27
UBE3D-205ENST00000503942 ERCC5P28715 1186 aaPredicted RBP7.13□□□□□ -1.27
UBE3D-205ENST00000503942 RACK1P63244 317 aaKnown RBP7.13□□□□□ -1.27
UBE3D-205ENST00000503942 ZNF394Q53GI3 561 aa7.13□□□□□ -1.27
UBE3D-205ENST00000503942 HS2ST1Q7LGA3 356 aa7.13□□□□□ -1.27
UBE3D-205ENST00000503942 DAGLBQ8NCG7 672 aa7.13□□□□□ -1.27
UBE3D-205ENST00000503942 PHC3Q8NDX5 983 aa7.13□□□□□ -1.27
UBE3D-205ENST00000503942 TCFL5Q9UL49 500 aa7.13□□□□□ -1.27
UBE3D-205ENST00000503942 FAM221AA4D161 298 aa7.12□□□□□ -1.27
UBE3D-205ENST00000503942 BNC2Q6ZN30 1099 aaPredicted RBP7.12□□□□□ -1.27
UBE3D-205ENST00000503942 LDHDQ86WU2 507 aa7.12□□□□□ -1.27
UBE3D-205ENST00000503942 ZNF655Q8N720 491 aaPredicted RBP7.12□□□□□ -1.27
UBE3D-205ENST00000503942 TP53I13Q8NBR0 393 aaPredicted RBP7.12□□□□□ -1.27
UBE3D-205ENST00000503942 LINC00116Q8NCU8 138 aa7.12□□□□□ -1.27
UBE3D-205ENST00000503942 TCTN2Q96GX1 697 aa7.12□□□□□ -1.27
UBE3D-205ENST00000503942 PWWP2AQ96N64 755 aa7.12□□□□□ -1.27
UBE3D-205ENST00000503942 BDH2Q9BUT1 245 aa7.12□□□□□ -1.27
UBE3D-205ENST00000503942 RSRP1Q9BUV0 290 aa7.12□□□□□ -1.27
UBE3D-205ENST00000503942 KLHL14Q9P2G3 628 aa7.12□□□□□ -1.27
UBE3D-205ENST00000503942 KLHL3Q9UH77 587 aa7.12□□□□□ -1.27
UBE3D-205ENST00000503942 DDX41Q9UJV9 622 aaKnown RBP7.12□□□□□ -1.27
UBE3D-205ENST00000503942 PCDHGB7Q9Y5F8 929 aa7.12□□□□□ -1.27
UBE3D-205ENST00000503942 CHURC1-FNTBB4DL54 471 aa7.11□□□□□ -1.27
UBE3D-205ENST00000503942 F6X3S4 739 aa7.11□□□□□ -1.27
UBE3D-205ENST00000503942 MPOP05164 745 aa7.11□□□□□ -1.27
UBE3D-205ENST00000503942 PCBP3P57721 371 aaKnown RBP7.11□□□□□ -1.27
UBE3D-205ENST00000503942 RTP1P59025 263 aa7.11□□□□□ -1.27
UBE3D-205ENST00000503942 PLP2Q04941 152 aa7.11□□□□□ -1.27
UBE3D-205ENST00000503942 BBS9Q3SYG4 887 aa7.11□□□□□ -1.27
UBE3D-205ENST00000503942 TMC6Q7Z403 805 aa7.11□□□□□ -1.27
UBE3D-205ENST00000503942 KRTAP9-8Q9BYQ0 159 aa7.11□□□□□ -1.27
UBE3D-205ENST00000503942 TGIF2Q9GZN2 237 aa7.11□□□□□ -1.27
UBE3D-205ENST00000503942 KBTBD4Q9NVX7 518 aa7.11□□□□□ -1.27
UBE3D-205ENST00000503942 HTR3BO95264 441 aa7.1□□□□□ -1.27
UBE3D-205ENST00000503942 USP48Q86UV5 1035 aa7.1□□□□□ -1.27
UBE3D-205ENST00000503942 PHACTR4Q8IZ21 702 aa7.1□□□□□ -1.27
UBE3D-205ENST00000503942 KIF2CQ99661 725 aa7.1□□□□□ -1.27
UBE3D-205ENST00000503942 PCDHA5Q9Y5H7 936 aa7.1□□□□□ -1.27
UBE3D-205ENST00000503942 DNAJA2O60884 412 aa7.09□□□□□ -1.27
UBE3D-205ENST00000503942 RNF4P78317 190 aa7.09□□□□□ -1.27
UBE3D-205ENST00000503942 TMEM62Q0P6H9 643 aa7.09□□□□□ -1.27
UBE3D-205ENST00000503942 ZPBP2Q6X784 338 aa7.09□□□□□ -1.27
UBE3D-205ENST00000503942 GATAD2BQ8WXI9 593 aa7.09□□□□□ -1.27
UBE3D-205ENST00000503942 FCRL2Q96LA5 508 aaPredicted RBP7.09□□□□□ -1.27
UBE3D-205ENST00000503942 ACBD3Q9H3P7 528 aa7.09□□□□□ -1.27
UBE3D-205ENST00000503942 TNFRSF10DQ9UBN6 386 aa7.09□□□□□ -1.27
UBE3D-205ENST00000503942 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.09□□□□□ -1.27
UBE3D-205ENST00000503942 POLR3KQ9Y2Y1 108 aaPredicted RBP7.09□□□□□ -1.27
UBE3D-205ENST00000503942 TAF6LQ9Y6J9 622 aa7.09□□□□□ -1.27
UBE3D-205ENST00000503942 SSU72P8A0A1W2PR75 194 aa7.08□□□□□ -1.28
UBE3D-205ENST00000503942 FADS2P1A8MWK0 482 aa7.08□□□□□ -1.28
UBE3D-205ENST00000503942 SYPP08247 313 aa7.08□□□□□ -1.28
UBE3D-205ENST00000503942 ARL4AP40617 200 aa7.08□□□□□ -1.28
UBE3D-205ENST00000503942 CAP1Q01518 475 aa7.08□□□□□ -1.28
UBE3D-205ENST00000503942 RTP5Q14D33 572 aa7.08□□□□□ -1.28
UBE3D-205ENST00000503942 HSF5Q4G112 596 aaPredicted RBP7.08□□□□□ -1.28
UBE3D-205ENST00000503942 GALNT18Q6P9A2 607 aa7.08□□□□□ -1.28
UBE3D-205ENST00000503942 TMC3Q7Z5M5 1100 aa7.08□□□□□ -1.28
UBE3D-205ENST00000503942 RHOVQ96L33 236 aa7.08□□□□□ -1.28
UBE3D-205ENST00000503942 TMEM74Q96NL1 305 aa7.08□□□□□ -1.28
UBE3D-205ENST00000503942 FFAR3O14843 346 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 PRICKLE3O43900 615 aaPredicted RBP7.07□□□□□ -1.28
UBE3D-205ENST00000503942 FKTNO75072 461 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 F13A1P00488 732 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 INSRRP14616 1297 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 GBP2P32456 591 aaPredicted RBP7.07□□□□□ -1.28
UBE3D-205ENST00000503942 CHMP4BP1P59074 171 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 ZC3H6P61129 1189 aaKnown RBP7.07□□□□□ -1.28
UBE3D-205ENST00000503942 LMNB2Q03252 620 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 LAPTM5Q13571 262 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 KIR3DS1Q14943 382 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 RAB3GAP1Q15042 981 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 HHIPL2Q6UWX4 724 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 RELL1Q8IUW5 271 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 ZNF654Q8IZM8 581 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms