RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ISY1Q9ULR0 285 aaKnown RBP29.39■■■□□ 2.29
LSM6-202ENST00000502781 ZSWIM8A7E2V4 1837 aa29.39■■■□□ 2.29
LSM6-202ENST00000502781 FRMPD2Q68DX3 1309 aaPredicted RBP29.38■■■□□ 2.29
LSM6-202ENST00000502781 FMNL1O95466 1100 aaPredicted RBP29.38■■■□□ 2.29
LSM6-202ENST00000502781 PSMA5P28066 241 aa29.38■■■□□ 2.29
LSM6-202ENST00000502781 MAPK4P31152 587 aa29.38■■■□□ 2.29
LSM6-202ENST00000502781 PKN2Q16513 984 aaKnown RBP29.38■■■□□ 2.29
LSM6-202ENST00000502781 SGMS1Q86VZ5 419 aa29.38■■■□□ 2.29
LSM6-202ENST00000502781 IL17RAQ96F46 866 aa29.38■■■□□ 2.29
LSM6-202ENST00000502781 LRRC2Q9BYS8 371 aa29.38■■■□□ 2.29
LSM6-202ENST00000502781 GPCPD1Q9NPB8 672 aa29.38■■■□□ 2.29
LSM6-202ENST00000502781 PRR12Q9ULL5 1215 aa29.38■■■□□ 2.29
LSM6-202ENST00000502781 ASPRV1Q53RT3 343 aa29.37■■■□□ 2.29
LSM6-202ENST00000502781 SHCBP1Q8NEM2 672 aa29.37■■■□□ 2.29
LSM6-202ENST00000502781 TNPO2O14787 897 aaKnown RBP29.36■■■□□ 2.29
LSM6-202ENST00000502781 ZBED4O75132 1171 aa29.36■■■□□ 2.29
LSM6-202ENST00000502781 ECM2O94769 699 aaPredicted RBP29.36■■■□□ 2.29
LSM6-202ENST00000502781 GOLGA8HP0CJ92 632 aa29.36■■■□□ 2.29
LSM6-202ENST00000502781 SLC16A2P36021 539 aa29.36■■■□□ 2.29
LSM6-202ENST00000502781 ANAPC15P60006 121 aa29.36■■■□□ 2.29
LSM6-202ENST00000502781 IKQ13123 557 aaPredicted RBP29.36■■■□□ 2.29
LSM6-202ENST00000502781 TCEANC2Q96MN5 208 aa29.36■■■□□ 2.29
LSM6-202ENST00000502781 TM6SF1Q9BZW5 370 aa29.36■■■□□ 2.29
LSM6-202ENST00000502781 SRRDQ9UH36 339 aa29.36■■■□□ 2.29
LSM6-202ENST00000502781 PARP1P09874 1014 aaKnown RBP29.35■■■□□ 2.29
LSM6-202ENST00000502781 CPA1P15085 419 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 STAT3P40763 770 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 OAZ1P54368 228 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 PRMT2P55345 433 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 SYDE2Q5VT97 1194 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 BLOC1S2Q6QNY1 142 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 CATIPQ7Z7H3 387 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 RIOX2Q8IUF8 465 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 FBXL16Q8N461 479 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 MCOLN1Q9GZU1 580 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 ZSWIM6Q9HCJ5 1215 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 PTPN22Q9Y2R2 807 aa29.35■■■□□ 2.29
LSM6-202ENST00000502781 PALM3A6NDB9 673 aaPredicted RBP29.34■■■□□ 2.29
LSM6-202ENST00000502781 DDAH1O94760 285 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 RPS6KB1P23443 525 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 HOXD10P28358 340 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 GRM4Q14833 912 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 GPR142Q7Z601 462 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 ZNF654Q8IZM8 581 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 COA7Q96BR5 231 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 MAP3K14Q99558 947 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 TEX13BQ9BXU2 312 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 MAD2L2Q9UI95 211 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 GJD2Q9UKL4 321 aa29.34■■■□□ 2.29
LSM6-202ENST00000502781 MGAMO43451 1857 aa29.33■■■□□ 2.29
LSM6-202ENST00000502781 CASTP20810 708 aaKnown RBP29.33■■■□□ 2.29
LSM6-202ENST00000502781 FBXO46Q6PJ61 603 aaPredicted RBP29.33■■■□□ 2.29
LSM6-202ENST00000502781 STAG2Q8N3U4 1231 aa29.33■■■□□ 2.29
LSM6-202ENST00000502781 AGXT2Q9BYV1 514 aa29.33■■■□□ 2.29
LSM6-202ENST00000502781 RANBP17Q9H2T7 1088 aaKnown RBP29.33■■■□□ 2.29
LSM6-202ENST00000502781 ZNF536O15090 1300 aa29.33■■■□□ 2.29
LSM6-202ENST00000502781 SLC25A27O95847 323 aa29.32■■■□□ 2.28
LSM6-202ENST00000502781 COL11A1P12107 1806 aaPredicted RBP29.32■■■□□ 2.28
LSM6-202ENST00000502781 ERCC3P19447 782 aa29.32■■■□□ 2.28
LSM6-202ENST00000502781 PRKCZQ05513 592 aa29.32■■■□□ 2.28
LSM6-202ENST00000502781 PLS1Q14651 629 aa29.32■■■□□ 2.28
LSM6-202ENST00000502781 PLEKHH3Q7Z736 793 aa29.32■■■□□ 2.28
LSM6-202ENST00000502781 CCDC69A6NI79 296 aa29.31■■■□□ 2.28
LSM6-202ENST00000502781 RUFY3Q7L099 469 aa29.31■■■□□ 2.28
LSM6-202ENST00000502781 CCAR1Q8IX12 1150 aaKnown RBP29.31■■■□□ 2.28
LSM6-202ENST00000502781 MROH8Q9H579 483 aa29.31■■■□□ 2.28
LSM6-202ENST00000502781 RAVER2Q9HCJ3 691 aaKnown RBP29.31■■■□□ 2.28
LSM6-202ENST00000502781 GABRQQ9UN88 632 aa29.31■■■□□ 2.28
LSM6-202ENST00000502781 DOCK3Q8IZD9 2030 aa29.31■■■□□ 2.28
LSM6-202ENST00000502781 COPB2P35606 906 aa29.3■■■□□ 2.28
LSM6-202ENST00000502781 NFXL1Q6ZNB6 911 aa29.3■■■□□ 2.28
LSM6-202ENST00000502781 CPXCR1Q8N123 301 aa29.3■■■□□ 2.28
LSM6-202ENST00000502781 UBA5Q9GZZ9 404 aa29.3■■■□□ 2.28
LSM6-202ENST00000502781 CPVLQ9H3G5 476 aa29.3■■■□□ 2.28
LSM6-202ENST00000502781 KLRF2D3W0D1 207 aa29.29■■■□□ 2.28
LSM6-202ENST00000502781 FLT3LGP49771 235 aa29.29■■■□□ 2.28
LSM6-202ENST00000502781 MORN1Q5T089 497 aa29.29■■■□□ 2.28
LSM6-202ENST00000502781 SNRNP48Q6IEG0 339 aaKnown RBP29.29■■■□□ 2.28
LSM6-202ENST00000502781 USP6NLQ92738 828 aa29.29■■■□□ 2.28
LSM6-202ENST00000502781 MYL10Q9BUA6 226 aa29.29■■■□□ 2.28
LSM6-202ENST00000502781 RIPK3Q9Y572 518 aa29.29■■■□□ 2.28
LSM6-202ENST00000502781 CTDP1Q9Y5B0 961 aaPredicted RBP29.29■■■□□ 2.28
LSM6-202ENST00000502781 SLC12A7Q9Y666 1083 aa29.29■■■□□ 2.28
LSM6-202ENST00000502781 PTPREP23469 700 aa29.28■■■□□ 2.28
LSM6-202ENST00000502781 IRF5Q13568 498 aa29.28■■■□□ 2.28
LSM6-202ENST00000502781 APOA5Q6Q788 366 aa29.28■■■□□ 2.28
LSM6-202ENST00000502781 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.28■■■□□ 2.28
LSM6-202ENST00000502781 NCAPG2Q86XI2 1143 aa29.28■■■□□ 2.28
LSM6-202ENST00000502781 BRPF3Q9ULD4 1205 aa29.28■■■□□ 2.28
LSM6-202ENST00000502781 CYP46A1Q9Y6A2 500 aa29.28■■■□□ 2.28
LSM6-202ENST00000502781 PTCH2Q9Y6C5 1203 aa29.28■■■□□ 2.28
LSM6-202ENST00000502781 STRNO43815 780 aa29.27■■■□□ 2.28
LSM6-202ENST00000502781 CALM1P0DP23 149 aa29.27■■■□□ 2.28
LSM6-202ENST00000502781 CALM2P0DP24 149 aa29.27■■■□□ 2.28
LSM6-202ENST00000502781 CALM3P0DP25 149 aa29.27■■■□□ 2.28
LSM6-202ENST00000502781 SNAP25P60880 206 aa29.27■■■□□ 2.28
LSM6-202ENST00000502781 GRB14Q14449 540 aa29.27■■■□□ 2.28
LSM6-202ENST00000502781 SLC35G1Q2M3R5 365 aa29.27■■■□□ 2.28
LSM6-202ENST00000502781 Q6ZUG5 572 aa29.27■■■□□ 2.28
LSM6-202ENST00000502781 ADGRF4Q8IZF3 695 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms