RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 GSC2O15499 205 aa9.24□□□□□ -0.93
NEDD4-203ENST00000502612 KCNH1O95259 989 aa9.24□□□□□ -0.93
NEDD4-203ENST00000502612 TRIM59Q8IWR1 403 aa9.24□□□□□ -0.93
NEDD4-203ENST00000502612 ZBTB38Q8NAP3 1195 aaPredicted RBP9.24□□□□□ -0.93
NEDD4-203ENST00000502612 PIWIL2Q8TC59 973 aaKnown RBP9.24□□□□□ -0.93
NEDD4-203ENST00000502612 SGSM3Q96HU1 749 aa9.24□□□□□ -0.93
NEDD4-203ENST00000502612 RCC1LQ96I51 464 aaKnown RBP9.24□□□□□ -0.93
NEDD4-203ENST00000502612 HSPA12BQ96MM6 686 aa9.24□□□□□ -0.93
NEDD4-203ENST00000502612 TMEM260Q9NX78 707 aa9.24□□□□□ -0.93
NEDD4-203ENST00000502612 ZC3H7BQ9UGR2 993 aaKnown RBP9.24□□□□□ -0.93
NEDD4-203ENST00000502612 CYP26A1O43174 497 aa9.23□□□□□ -0.93
NEDD4-203ENST00000502612 VAMP4O75379 141 aa9.23□□□□□ -0.93
NEDD4-203ENST00000502612 TGFB1P01137 390 aa9.23□□□□□ -0.93
NEDD4-203ENST00000502612 SRFP11831 508 aa9.23□□□□□ -0.93
NEDD4-203ENST00000502612 L1CAMP32004 1257 aa9.23□□□□□ -0.93
NEDD4-203ENST00000502612 SF1Q15637 639 aaKnown RBP9.23□□□□□ -0.93
NEDD4-203ENST00000502612 EGFLAMQ63HQ2 1017 aa9.23□□□□□ -0.93
NEDD4-203ENST00000502612 EXOC2Q96KP1 924 aa9.23□□□□□ -0.93
NEDD4-203ENST00000502612 MCMBPQ9BTE3 642 aa9.23□□□□□ -0.93
NEDD4-203ENST00000502612 GPR62Q9BZJ7 368 aa9.23□□□□□ -0.93
NEDD4-203ENST00000502612 PIM2Q9P1W9 311 aa9.23□□□□□ -0.93
NEDD4-203ENST00000502612 NOP56O00567 594 aaKnown RBP9.22□□□□□ -0.93
NEDD4-203ENST00000502612 CDC45O75419 566 aa9.22□□□□□ -0.93
NEDD4-203ENST00000502612 CAPNS1P04632 268 aa9.22□□□□□ -0.93
NEDD4-203ENST00000502612 CLEC16AQ2KHT3 1053 aa9.22□□□□□ -0.93
NEDD4-203ENST00000502612 DPY19L1Q2PZI1 675 aa9.22□□□□□ -0.93
NEDD4-203ENST00000502612 TKFCQ3LXA3 575 aa9.22□□□□□ -0.93
NEDD4-203ENST00000502612 FAM209AQ5JX71 171 aa9.22□□□□□ -0.93
NEDD4-203ENST00000502612 AARSD1Q9BTE6 412 aaKnown RBP9.22□□□□□ -0.93
NEDD4-203ENST00000502612 ASCC2Q9H1I8 757 aaPredicted RBP9.22□□□□□ -0.93
NEDD4-203ENST00000502612 GPR55Q9Y2T6 319 aaPredicted RBP9.22□□□□□ -0.93
NEDD4-203ENST00000502612 A0A087WZG4 1122 aa9.21□□□□□ -0.94
NEDD4-203ENST00000502612 GTF2IRD2BQ6EKJ0 949 aa9.21□□□□□ -0.94
NEDD4-203ENST00000502612 GTF2IRD2Q86UP8 949 aa9.21□□□□□ -0.94
NEDD4-203ENST00000502612 APPBP2Q92624 585 aa9.21□□□□□ -0.94
NEDD4-203ENST00000502612 SEMA3GQ9NS98 782 aa9.21□□□□□ -0.94
NEDD4-203ENST00000502612 PRR13Q9NZ81 148 aa9.21□□□□□ -0.94
NEDD4-203ENST00000502612 ZSWIM5Q9P217 1185 aa9.21□□□□□ -0.94
NEDD4-203ENST00000502612 TRAV20A0A0B4J274 112 aa9.2□□□□□ -0.94
NEDD4-203ENST00000502612 PRODHO43272 600 aa9.2□□□□□ -0.94
NEDD4-203ENST00000502612 HSD3B2P26439 372 aa9.2□□□□□ -0.94
NEDD4-203ENST00000502612 HSP90AA2PQ14568 343 aaPredicted RBP9.2□□□□□ -0.94
NEDD4-203ENST00000502612 PRSS36Q5K4E3 855 aa9.2□□□□□ -0.94
NEDD4-203ENST00000502612 HOMER1Q86YM7 354 aa9.2□□□□□ -0.94
NEDD4-203ENST00000502612 TCTN2Q96GX1 697 aa9.2□□□□□ -0.94
NEDD4-203ENST00000502612 IER2Q9BTL4 223 aa9.2□□□□□ -0.94
NEDD4-203ENST00000502612 MKNK2Q9HBH9 465 aa9.2□□□□□ -0.94
NEDD4-203ENST00000502612 CWC22Q9HCG8 908 aaKnown RBP9.2□□□□□ -0.94
NEDD4-203ENST00000502612 DIS3Q9Y2L1 958 aaKnown RBP9.2□□□□□ -0.94
NEDD4-203ENST00000502612 STXBP3O00186 592 aa9.19□□□□□ -0.94
NEDD4-203ENST00000502612 PPP1R12AO14974 1030 aaPredicted RBP9.19□□□□□ -0.94
NEDD4-203ENST00000502612 FOSL1P15407 271 aa9.19□□□□□ -0.94
NEDD4-203ENST00000502612 TPP2P29144 1249 aaPredicted RBP9.19□□□□□ -0.94
NEDD4-203ENST00000502612 CYP4F3Q08477 520 aa9.19□□□□□ -0.94
NEDD4-203ENST00000502612 CPSF6Q16630 551 aaKnown RBP eCLIP9.19□□□□□ -0.94
NEDD4-203ENST00000502612 TMEM67Q5HYA8 995 aa9.19□□□□□ -0.94
NEDD4-203ENST00000502612 TSPYL5Q86VY4 417 aaPredicted RBP9.19□□□□□ -0.94
NEDD4-203ENST00000502612 ZSWIM2Q8NEG5 633 aa9.19□□□□□ -0.94
NEDD4-203ENST00000502612 NETO1Q8TDF5 533 aa9.19□□□□□ -0.94
NEDD4-203ENST00000502612 UBE2FQ969M7 185 aa9.19□□□□□ -0.94
NEDD4-203ENST00000502612 OSBP2Q969R2 916 aa9.19□□□□□ -0.94
NEDD4-203ENST00000502612 SEMA6BQ9H3T3 888 aa9.19□□□□□ -0.94
NEDD4-203ENST00000502612 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.19□□□□□ -0.94
NEDD4-203ENST00000502612 SF3B6Q9Y3B4 125 aaKnown RBP9.19□□□□□ -0.94
NEDD4-203ENST00000502612 ASMTLO95671 621 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 CD3EP07766 207 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 IFNGR1P15260 489 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 IFI16Q16666 785 aaKnown RBP9.18□□□□□ -0.94
NEDD4-203ENST00000502612 C21orf62-AS1Q17RA5 79 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 PRSS53Q2L4Q9 553 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 POMZP3Q6PJE2 187 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 DAGLBQ8NCG7 672 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 CDC6Q99741 560 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 ATP13A1Q9HD20 1204 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 GPATCH2Q9NW75 528 aa9.18□□□□□ -0.94
NEDD4-203ENST00000502612 SBNO2Q9Y2G9 1366 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 BLACEA4D250 179 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 GSNP06396 782 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 PABPC1P11940 636 aaKnown RBP9.17□□□□□ -0.94
NEDD4-203ENST00000502612 ITGB7P26010 798 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 CD96P40200 585 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 CLCN7P51798 805 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 AMPD2Q01433 879 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 GRB10Q13322 594 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 CBX2Q14781 532 aaPredicted RBP9.17□□□□□ -0.94
NEDD4-203ENST00000502612 GAB4Q2WGN9 574 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 PLEKHG4Q58EX7 1191 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 USHBP1Q8N6Y0 703 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 ZNF655Q8N720 491 aaPredicted RBP9.17□□□□□ -0.94
NEDD4-203ENST00000502612 ENOX1Q8TC92 643 aaKnown RBP9.17□□□□□ -0.94
NEDD4-203ENST00000502612 KISS1RQ969F8 398 aaPredicted RBP9.17□□□□□ -0.94
NEDD4-203ENST00000502612 FOXP3Q9BZS1 431 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 NKX2-4Q9H2Z4 354 aa9.17□□□□□ -0.94
NEDD4-203ENST00000502612 TRIT1Q9H3H1 467 aaKnown RBP9.17□□□□□ -0.94
NEDD4-203ENST00000502612 MRPS23Q9Y3D9 190 aaKnown RBP9.17□□□□□ -0.94
NEDD4-203ENST00000502612 TRBV23-1A0A0A0MS06 115 aa9.16□□□□□ -0.94
NEDD4-203ENST00000502612 DLX3O60479 287 aa9.16□□□□□ -0.94
NEDD4-203ENST00000502612 FGFR1P11362 822 aa9.16□□□□□ -0.94
NEDD4-203ENST00000502612 GFRA1P56159 465 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms