RNA–Protein interactions for RNA: ENST00000502588.5

TNFRSF25-216, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-216ENST00000502588 IL17RBQ9NRM6 502 aa27■■□□□ 1.91
TNFRSF25-216ENST00000502588 RBM27Q9P2N5 1060 aaKnown RBP27■■□□□ 1.91
TNFRSF25-216ENST00000502588 ANAPC4Q9UJX5 808 aa27■■□□□ 1.91
TNFRSF25-216ENST00000502588 ALX1Q15699 326 aa26.99■■□□□ 1.91
TNFRSF25-216ENST00000502588 SLFN13Q68D06 897 aa26.99■■□□□ 1.91
TNFRSF25-216ENST00000502588 KIFC2Q96AC6 838 aa26.99■■□□□ 1.91
TNFRSF25-216ENST00000502588 TSPY2A6NKD2 308 aa26.98■■□□□ 1.91
TNFRSF25-216ENST00000502588 FGAP02671 866 aa26.98■■□□□ 1.91
TNFRSF25-216ENST00000502588 HSPD1P10809 573 aaKnown RBP26.98■■□□□ 1.91
TNFRSF25-216ENST00000502588 FXR1P51114 621 aaKnown RBP eCLIP26.98■■□□□ 1.91
TNFRSF25-216ENST00000502588 SNRNP48Q6IEG0 339 aaKnown RBP26.98■■□□□ 1.91
TNFRSF25-216ENST00000502588 CPXCR1Q8N123 301 aa26.98■■□□□ 1.91
TNFRSF25-216ENST00000502588 PRPF38AQ8NAV1 312 aaKnown RBP26.98■■□□□ 1.91
TNFRSF25-216ENST00000502588 PRO3102Q9H379 93 aa26.98■■□□□ 1.91
TNFRSF25-216ENST00000502588 OSBPL3Q9H4L5 887 aa26.98■■□□□ 1.91
TNFRSF25-216ENST00000502588 RANBP2P49792 3224 aaKnown RBP26.97■■□□□ 1.91
TNFRSF25-216ENST00000502588 CCDC171Q6TFL3 1326 aa26.97■■□□□ 1.91
TNFRSF25-216ENST00000502588 SLC4A3P48751 1232 aa26.97■■□□□ 1.91
TNFRSF25-216ENST00000502588 TEX13BQ9BXU2 312 aa26.97■■□□□ 1.91
TNFRSF25-216ENST00000502588 RAVER2Q9HCJ3 691 aaKnown RBP26.97■■□□□ 1.91
TNFRSF25-216ENST00000502588 ZMYND8Q9ULU4 1186 aaPredicted RBP26.97■■□□□ 1.91
TNFRSF25-216ENST00000502588 SYNPO2Q9UMS6 1093 aa26.97■■□□□ 1.91
TNFRSF25-216ENST00000502588 RANBP6O60518 1105 aaKnown RBP26.96■■□□□ 1.91
TNFRSF25-216ENST00000502588 BMP3P12645 472 aa26.96■■□□□ 1.91
TNFRSF25-216ENST00000502588 SDSP20132 328 aa26.96■■□□□ 1.91
TNFRSF25-216ENST00000502588 HAND2P61296 217 aa26.96■■□□□ 1.91
TNFRSF25-216ENST00000502588 STX8Q9UNK0 236 aa26.96■■□□□ 1.91
TNFRSF25-216ENST00000502588 KCTD2Q14681 263 aa26.95■■□□□ 1.9
TNFRSF25-216ENST00000502588 ZNF792Q3KQV3 632 aa26.95■■□□□ 1.9
TNFRSF25-216ENST00000502588 SLC38A10Q9HBR0 1119 aa26.95■■□□□ 1.9
TNFRSF25-216ENST00000502588 FEM1BQ9UK73 627 aa26.95■■□□□ 1.9
TNFRSF25-216ENST00000502588 ISY1Q9ULR0 285 aaKnown RBP26.95■■□□□ 1.9
TNFRSF25-216ENST00000502588 ORC4O43929 436 aa26.94■■□□□ 1.9
TNFRSF25-216ENST00000502588 FGRP09769 529 aa26.94■■□□□ 1.9
TNFRSF25-216ENST00000502588 SYN1P17600 705 aa26.94■■□□□ 1.9
TNFRSF25-216ENST00000502588 MCCP23508 829 aa26.94■■□□□ 1.9
TNFRSF25-216ENST00000502588 LRRC26Q2I0M4 334 aa26.94■■□□□ 1.9
TNFRSF25-216ENST00000502588 SLC5A4Q9NY91 659 aa26.94■■□□□ 1.9
TNFRSF25-216ENST00000502588 DNAH12Q6ZR08 3092 aa26.93■■□□□ 1.9
TNFRSF25-216ENST00000502588 LCTP09848 1927 aa26.93■■□□□ 1.9
TNFRSF25-216ENST00000502588 TMEM232C9JQI7 657 aa26.93■■□□□ 1.9
TNFRSF25-216ENST00000502588 TAL1P17542 331 aaPredicted RBP26.93■■□□□ 1.9
TNFRSF25-216ENST00000502588 PDE4AP27815 886 aa26.93■■□□□ 1.9
TNFRSF25-216ENST00000502588 RRP12Q5JTH9 1297 aaKnown RBP26.93■■□□□ 1.9
TNFRSF25-216ENST00000502588 MTMR7Q9Y216 660 aa26.93■■□□□ 1.9
TNFRSF25-216ENST00000502588 ZMYM6O95789 1325 aa26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 ATP2A1O14983 1001 aa26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 MSCO60682 206 aa26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 ZBED4O75132 1171 aa26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 COPB2P35606 906 aa26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 GJC2Q5T442 439 aaPredicted RBP26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 KCTD1Q719H9 257 aa26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 TICAM2Q86XR7 235 aa26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 TBC1D10CQ8IV04 446 aa26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 GMCL1Q96IK5 515 aa26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 TOMM22Q9NS69 142 aa26.92■■□□□ 1.9
TNFRSF25-216ENST00000502588 SEPT4O43236 478 aa26.91■■□□□ 1.9
TNFRSF25-216ENST00000502588 NOVP48745 357 aa26.91■■□□□ 1.9
TNFRSF25-216ENST00000502588 SNAP25P60880 206 aa26.91■■□□□ 1.9
TNFRSF25-216ENST00000502588 CWC27Q6UX04 472 aaKnown RBP26.91■■□□□ 1.9
TNFRSF25-216ENST00000502588 TINF2Q9BSI4 451 aa26.91■■□□□ 1.9
TNFRSF25-216ENST00000502588 SLC1A4P43007 532 aa26.9■■□□□ 1.9
TNFRSF25-216ENST00000502588 STAT2P52630 851 aa26.9■■□□□ 1.9
TNFRSF25-216ENST00000502588 SENP6Q9GZR1 1112 aaPredicted RBP26.9■■□□□ 1.9
TNFRSF25-216ENST00000502588 ZNF536O15090 1300 aa26.9■■□□□ 1.9
TNFRSF25-216ENST00000502588 DNAJC25-GNG10A0A024R161 153 aa26.89■■□□□ 1.9
TNFRSF25-216ENST00000502588 LENG1Q96BZ8 264 aaPredicted RBP26.89■■□□□ 1.9
TNFRSF25-216ENST00000502588 FGD4Q96M96 766 aa26.89■■□□□ 1.9
TNFRSF25-216ENST00000502588 IL25Q9H293 177 aa26.89■■□□□ 1.9
TNFRSF25-216ENST00000502588 HOMER2Q9NSB8 354 aa26.89■■□□□ 1.9
TNFRSF25-216ENST00000502588 DIS3Q9Y2L1 958 aaKnown RBP26.89■■□□□ 1.9
TNFRSF25-216ENST00000502588 CTDP1Q9Y5B0 961 aaPredicted RBP26.89■■□□□ 1.9
TNFRSF25-216ENST00000502588 LRRC37A2A6NM11 1700 aa26.89■■□□□ 1.9
TNFRSF25-216ENST00000502588 DNM1LO00429 736 aa26.88■■□□□ 1.89
TNFRSF25-216ENST00000502588 ATN1P54259 1190 aaPredicted RBP26.88■■□□□ 1.89
TNFRSF25-216ENST00000502588 IKQ13123 557 aaPredicted RBP26.88■■□□□ 1.89
TNFRSF25-216ENST00000502588 STAG1Q8WVM7 1258 aa26.88■■□□□ 1.89
TNFRSF25-216ENST00000502588 AGBL1Q96MI9 1066 aa26.88■■□□□ 1.89
TNFRSF25-216ENST00000502588 LTBP2Q14767 1821 aa26.88■■□□□ 1.89
TNFRSF25-216ENST00000502588 NEDD4P46934 1319 aa26.88■■□□□ 1.89
TNFRSF25-216ENST00000502588 MYCNP04198 464 aaPredicted RBP26.87■■□□□ 1.89
TNFRSF25-216ENST00000502588 DDX11Q96FC9 970 aa26.87■■□□□ 1.89
TNFRSF25-216ENST00000502588 DIAPH3Q9NSV4 1193 aa26.87■■□□□ 1.89
TNFRSF25-216ENST00000502588 ZNF865P0CJ78 1059 aaPredicted RBP26.86■■□□□ 1.89
TNFRSF25-216ENST00000502588 GSPT1P15170 499 aaKnown RBP26.86■■□□□ 1.89
TNFRSF25-216ENST00000502588 OAZ1P54368 228 aa26.86■■□□□ 1.89
TNFRSF25-216ENST00000502588 TTBK2Q6IQ55 1244 aa26.86■■□□□ 1.89
TNFRSF25-216ENST00000502588 RCSD1Q6JBY9 416 aa26.86■■□□□ 1.89
TNFRSF25-216ENST00000502588 FAM160B2Q86V87 743 aa26.86■■□□□ 1.89
TNFRSF25-216ENST00000502588 GDF15Q99988 308 aa26.86■■□□□ 1.89
TNFRSF25-216ENST00000502588 TMEM47Q9BQJ4 181 aa26.86■■□□□ 1.89
TNFRSF25-216ENST00000502588 PRR12Q9ULL5 1215 aa26.86■■□□□ 1.89
TNFRSF25-216ENST00000502588 CCDC96Q2M329 555 aa26.85■■□□□ 1.89
TNFRSF25-216ENST00000502588 PPP4R3BQ5MIZ7 849 aa26.85■■□□□ 1.89
TNFRSF25-216ENST00000502588 AKNAD1Q5T1N1 836 aa26.85■■□□□ 1.89
TNFRSF25-216ENST00000502588 CCDC174Q6PII3 467 aa26.85■■□□□ 1.89
TNFRSF25-216ENST00000502588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.85■■□□□ 1.89
TNFRSF25-216ENST00000502588 CHURC1Q8WUH1 139 aa26.85■■□□□ 1.89
TNFRSF25-216ENST00000502588 SNAI1O95863 264 aaPredicted RBP26.84■■□□□ 1.89
TNFRSF25-216ENST00000502588 LRRC41Q15345 812 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms