RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 HOMER1Q86YM7 354 aa15.54■□□□□ 0.08
SGCA-203ENST00000502555 SPICE1Q8N0Z3 855 aa15.54■□□□□ 0.08
SGCA-203ENST00000502555 DAGLBQ8NCG7 672 aa15.54■□□□□ 0.08
SGCA-203ENST00000502555 ZNF280CQ8ND82 737 aa15.54■□□□□ 0.08
SGCA-203ENST00000502555 SHISA4Q96DD7 197 aa15.54■□□□□ 0.08
SGCA-203ENST00000502555 NUP88Q99567 741 aaPredicted RBP15.54■□□□□ 0.08
SGCA-203ENST00000502555 VAT1LQ9HCJ6 419 aa15.54■□□□□ 0.08
SGCA-203ENST00000502555 CFAP45Q9UL16 551 aa15.54■□□□□ 0.08
SGCA-203ENST00000502555 CLEC11AQ9Y240 323 aa15.54■□□□□ 0.08
SGCA-203ENST00000502555 CSADQ9Y600 493 aa15.54■□□□□ 0.08
SGCA-203ENST00000502555 ESYT2A0FGR8 921 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 TMEM232C9JQI7 657 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 NCLP19338 710 aaKnown RBP15.53■□□□□ 0.08
SGCA-203ENST00000502555 BACE1P56817 501 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 IKQ13123 557 aaPredicted RBP15.53■□□□□ 0.08
SGCA-203ENST00000502555 VGLL4Q14135 290 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 KIAA1755Q5JYT7 1200 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 FAM83BQ5T0W9 1011 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 MYSM1Q5VVJ2 828 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.53■□□□□ 0.08
SGCA-203ENST00000502555 NOSTRINQ8IVI9 506 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 CHURC1Q8WUH1 139 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 GPKOWQ92917 476 aaPredicted RBP eCLIP15.53■□□□□ 0.08
SGCA-203ENST00000502555 CHAMP1Q96JM3 812 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 SCAND2PQ9GZW5 306 aaPredicted RBP15.53■□□□□ 0.08
SGCA-203ENST00000502555 RRAGCQ9HB90 399 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 FEM1BQ9UK73 627 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 CNPY2Q9Y2B0 182 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 SNCAIPQ9Y6H5 919 aa15.53■□□□□ 0.08
SGCA-203ENST00000502555 PAPPA2Q9BXP8 1791 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 BTBD18B2RXH4 712 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 C19orf81C9J6K1 198 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 NAPAP54920 295 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 SPP2Q13103 211 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 MTMR2Q13614 643 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 PRKG1Q13976 671 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 NPY5RQ15761 445 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 ZYXQ15942 572 aaKnown RBP15.52■□□□□ 0.08
SGCA-203ENST00000502555 CDC37Q16543 378 aaPredicted RBP15.52■□□□□ 0.08
SGCA-203ENST00000502555 FAM173BQ6P4H8 233 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 DLK2Q6UY11 383 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 ARMC9Q7Z3E5 817 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 ANKRD13AQ8IZ07 590 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 RBM46Q8TBY0 533 aaKnown RBP15.52■□□□□ 0.08
SGCA-203ENST00000502555 C12orf42Q96LP6 360 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 ZMYND12Q9H0C1 365 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 PCDHA4Q9UN74 947 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 FZD1Q9UP38 647 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 ZHX2Q9Y6X8 837 aa15.52■□□□□ 0.08
SGCA-203ENST00000502555 UNCXA6NJT0 531 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 FIBPO43427 364 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 POTEJP0CG39 1038 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 GNA11P29992 359 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 TRAF1Q13077 416 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 MAP1SQ66K74 1059 aaPredicted RBP15.51■□□□□ 0.07
SGCA-203ENST00000502555 TYW1BQ6NUM6 668 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 PRR12Q9ULL5 1215 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 UTRNP46939 3433 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 ELP1O95163 1332 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 MYH6P13533 1939 aa15.51■□□□□ 0.07
SGCA-203ENST00000502555 VCAM1P19320 739 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 NR5A1Q13285 461 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 TTLL12Q14166 644 aaPredicted RBP15.5■□□□□ 0.07
SGCA-203ENST00000502555 NBR1Q14596 966 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 QRICH1Q2TAL8 776 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 RILPL1Q5EBL4 403 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 BLIDQ8IZY5 108 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 BICD2Q8TD16 824 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 TNFRSF25Q93038 417 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 C6orf50Q9HD87 102 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 EMILIN3Q9NT22 766 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 LMBRD1Q9NUN5 540 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 AFG3L2Q9Y4W6 797 aa15.5■□□□□ 0.07
SGCA-203ENST00000502555 POLR2AP24928 1970 aaKnown RBP15.5■□□□□ 0.07
SGCA-203ENST00000502555 TRIM75PA6NK02 468 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 PPP1R11O60927 126 aaPredicted RBP15.49■□□□□ 0.07
SGCA-203ENST00000502555 PRPF40AO75400 957 aaKnown RBP15.49■□□□□ 0.07
SGCA-203ENST00000502555 FKBP1BP68106 108 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 SKOR2Q2VWA4 1001 aaPredicted RBP15.49■□□□□ 0.07
SGCA-203ENST00000502555 SH3D19Q5HYK7 790 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 ERO1BQ86YB8 467 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 TEX2Q8IWB9 1127 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 OXER1Q8TDS5 423 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 LEO1Q8WVC0 666 aaPredicted RBP15.49■□□□□ 0.07
SGCA-203ENST00000502555 SPATA32Q96LK8 384 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 AMNQ9BXJ7 453 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 GLT8D2Q9H1C3 349 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 RANBP17Q9H2T7 1088 aaKnown RBP15.49■□□□□ 0.07
SGCA-203ENST00000502555 POLR3EQ9NVU0 708 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 RTEL1Q9NZ71 1219 aa15.49■□□□□ 0.07
SGCA-203ENST00000502555 SMCO2A6NFE2 343 aa15.48■□□□□ 0.07
SGCA-203ENST00000502555 SPDYE5A6NIY4 337 aa15.48■□□□□ 0.07
SGCA-203ENST00000502555 YEATS4O95619 227 aa15.48■□□□□ 0.07
SGCA-203ENST00000502555 TRAPPC10P48553 1259 aa15.48■□□□□ 0.07
SGCA-203ENST00000502555 NASPP49321 788 aaPredicted RBP15.48■□□□□ 0.07
SGCA-203ENST00000502555 ADCY7P51828 1080 aa15.48■□□□□ 0.07
SGCA-203ENST00000502555 PPATQ06203 517 aa15.48■□□□□ 0.07
SGCA-203ENST00000502555 FBXO11Q86XK2 927 aa15.48■□□□□ 0.07
SGCA-203ENST00000502555 USP28Q96RU2 1077 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms