RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 FAM89AQ96GI7 184 aa9.22□□□□□ -0.93
GARNL3-222ENST00000498801 ZKSCAN3Q9BRR0 538 aa9.22□□□□□ -0.93
GARNL3-222ENST00000498801 UBE2OQ9C0C9 1292 aaKnown RBP9.22□□□□□ -0.93
GARNL3-222ENST00000498801 AVENQ9NQS1 362 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-222ENST00000498801 METTL5Q9NRN9 209 aaKnown RBP9.22□□□□□ -0.93
GARNL3-222ENST00000498801 C9orf78Q9NZ63 289 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-222ENST00000498801 PDE8AO60658 829 aa9.21□□□□□ -0.94
GARNL3-222ENST00000498801 CSF1RP07333 972 aa9.21□□□□□ -0.94
GARNL3-222ENST00000498801 NBPF7P0C2Y1 421 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-222ENST00000498801 HCLS1P14317 486 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-222ENST00000498801 PCBP4P57723 403 aaKnown RBP9.21□□□□□ -0.94
GARNL3-222ENST00000498801 GPR162Q16538 588 aa9.21□□□□□ -0.94
GARNL3-222ENST00000498801 UBE3BQ7Z3V4 1068 aa9.21□□□□□ -0.94
GARNL3-222ENST00000498801 JARID2Q92833 1246 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-222ENST00000498801 RPGRQ92834 1020 aaKnown RBP9.21□□□□□ -0.94
GARNL3-222ENST00000498801 RBM17Q96I25 401 aaKnown RBP9.21□□□□□ -0.94
GARNL3-222ENST00000498801 OSMRQ99650 979 aa9.21□□□□□ -0.94
GARNL3-222ENST00000498801 USP44Q9H0E7 712 aa9.21□□□□□ -0.94
GARNL3-222ENST00000498801 IGFLR1Q9H665 355 aa9.21□□□□□ -0.94
GARNL3-222ENST00000498801 LIN7BQ9HAP6 207 aa9.21□□□□□ -0.94
GARNL3-222ENST00000498801 DNAJB12Q9NXW2 375 aaKnown RBP9.21□□□□□ -0.94
GARNL3-222ENST00000498801 DDX19BQ9UMR2 479 aa9.21□□□□□ -0.94
GARNL3-222ENST00000498801 DUOX1Q9NRD9 1551 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 LTBP1Q14766 1721 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 NFKBIEO00221 500 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 BBOX1O75936 387 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 GNAI3P08754 354 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 UBTFL1P0CB47 393 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-222ENST00000498801 ZNF76P36508 570 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 TBC1D8BQ0IIM8 1120 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 GRAPQ13588 217 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 RABL6Q3YEC7 729 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-222ENST00000498801 CCDC152Q4G0S7 254 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 CCDC93Q567U6 631 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 MEI1Q5TIA1 1274 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 GPR161Q8N6U8 529 aaKnown RBP9.2□□□□□ -0.94
GARNL3-222ENST00000498801 GRAPLQ8TC17 118 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-222ENST00000498801 TNFRSF25Q93038 417 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 SPACA7Q96KW9 195 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 TCF12Q99081 682 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 PSMD1Q99460 953 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 MEIS3Q99687 375 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 RTFDC1Q9BY42 306 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-222ENST00000498801 ABCB6Q9NP58 842 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 DZANK1Q9NVP4 752 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 ATP6V0A2Q9Y487 856 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 COL4A1P02462 1669 aa9.2□□□□□ -0.94
GARNL3-222ENST00000498801 J3QW42 95 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 VSIG8P0DPA2 414 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 ARAFP10398 606 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 GSTT1P30711 240 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 PCSK7Q16549 785 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 HFE2Q6ZVN8 426 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 METTL16Q86W50 562 aaKnown RBP9.19□□□□□ -0.94
GARNL3-222ENST00000498801 CCNJLQ8IV13 435 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 TTLL11Q8NHH1 800 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 RNF34Q969K3 372 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 HHIPQ96QV1 700 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 CRBNQ96SW2 442 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 CHMP4BQ9H444 224 aaKnown RBP9.19□□□□□ -0.94
GARNL3-222ENST00000498801 HDAC5Q9UQL6 1122 aa9.19□□□□□ -0.94
GARNL3-222ENST00000498801 TRPA1O75762 1119 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 ADH6P28332 368 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 IRX6P78412 446 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-222ENST00000498801 FOXO4P98177 505 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 ATP11AP98196 1134 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 C9orf131Q5VYM1 1079 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 DDX46Q7L014 1031 aaKnown RBP9.18□□□□□ -0.94
GARNL3-222ENST00000498801 RTKN2Q8IZC4 609 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 C3orf58Q8NDZ4 430 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 ZNF622Q969S3 477 aaKnown RBP eCLIP9.18□□□□□ -0.94
GARNL3-222ENST00000498801 KAZALD1Q96I82 304 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 SUCLG2Q96I99 432 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 OXCT2Q9BYC2 517 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-222ENST00000498801 VPS33BQ9H267 617 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 KLF15Q9UIH9 416 aa9.18□□□□□ -0.94
GARNL3-222ENST00000498801 GNAI2P04899 355 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 EIF2AK2P19525 551 aaKnown RBP9.17□□□□□ -0.94
GARNL3-222ENST00000498801 ERCC5P28715 1186 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-222ENST00000498801 MAP2K3P46734 347 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 ST13P50502 369 aaKnown RBP9.17□□□□□ -0.94
GARNL3-222ENST00000498801 FCGRTP55899 365 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 MTX1Q13505 466 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 TAF1CQ15572 869 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-222ENST00000498801 SP8Q8IXZ3 490 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 TMEM102Q8N9M5 508 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-222ENST00000498801 CDC5LQ99459 802 aaKnown RBP9.17□□□□□ -0.94
GARNL3-222ENST00000498801 BHLHE41Q9C0J9 482 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-222ENST00000498801 TAOK3Q9H2K8 898 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 RASSF4Q9H2L5 321 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 ZBTB40Q9NUA8 1239 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 PPP4R2Q9NY27 417 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 NAGPAQ9UK23 515 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 SLC6A14Q9UN76 642 aa9.17□□□□□ -0.94
GARNL3-222ENST00000498801 NSFL1CQ9UNZ2 370 aaKnown RBP9.17□□□□□ -0.94
GARNL3-222ENST00000498801 LRRFIP2Q9Y608 721 aaKnown RBP9.17□□□□□ -0.94
GARNL3-222ENST00000498801 ZNF609O15014 1411 aa9.16□□□□□ -0.94
GARNL3-222ENST00000498801 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
GARNL3-222ENST00000498801 GHRHP01286 108 aa9.16□□□□□ -0.94
GARNL3-222ENST00000498801 LMNB1P20700 586 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms