RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 VAV2P52735 878 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 GRIN1Q05586 938 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 SHC4Q6S5L8 630 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 YTHDF3Q7Z739 585 aaKnown RBP12.9□□□□□ -0.34
PBX1-211ENST00000498497 KCNG4Q8TDN1 519 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 UBLCP1Q8WVY7 318 aaPredicted RBP12.9□□□□□ -0.34
PBX1-211ENST00000498497 KAT6BQ8WYB5 2073 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 RAPGEF5Q92565 580 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 SEC31BQ9NQW1 1179 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 FANCAO15360 1455 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 RCCD1A6NED2 376 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 STXBP3O00186 592 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
PBX1-211ENST00000498497 SASH1O94885 1247 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 TRIM37O94972 964 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 BPIFB4P59827 614 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 XRCC4Q13426 336 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 TMED1Q13445 227 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 ANO1Q5XXA6 986 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 USP44Q9H0E7 712 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.9□□□□□ -0.34
PBX1-211ENST00000498497 MAN1B1Q9UKM7 699 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 HYOU1Q9Y4L1 999 aa12.9□□□□□ -0.34
PBX1-211ENST00000498497 EPN1Q9Y6I3 576 aaPredicted RBP12.9□□□□□ -0.34
PBX1-211ENST00000498497 NUP153P49790 1475 aaKnown RBP12.89□□□□□ -0.35
PBX1-211ENST00000498497 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
PBX1-211ENST00000498497 A0A1W2PP64 1363 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 AMPHP49418 695 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 ANO7Q6IWH7 933 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 KDM7AQ6ZMT4 941 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 DDX42Q86XP3 938 aaKnown RBP eCLIP12.89□□□□□ -0.35
PBX1-211ENST00000498497 KLHL29Q96CT2 875 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 ECHDC1Q9NTX5 307 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 WWC3Q9ULE0 1092 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 ZNF711Q9Y462 761 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 MYO5CQ9NQX4 1742 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 GLI1P08151 1106 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 KRT16P08779 473 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 USP46P62068 366 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 ZRSR2Q15696 482 aaKnown RBP12.89□□□□□ -0.35
PBX1-211ENST00000498497 OLFML1Q6UWY5 402 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
PBX1-211ENST00000498497 ATP6V1G3Q96LB4 118 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 MED15Q96RN5 788 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 NDNQ99608 321 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 MLXIPQ9HAP2 919 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 CNOT8Q9UFF9 292 aaKnown RBP12.89□□□□□ -0.35
PBX1-211ENST00000498497 UGGT1Q9NYU2 1555 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 PBRM1Q86U86 1689 aa12.89□□□□□ -0.35
PBX1-211ENST00000498497 EIF2AK4Q9P2K8 1649 aaKnown RBP12.89□□□□□ -0.35
PBX1-211ENST00000498497 GFPT2O94808 682 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 NAT1P18440 290 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 RAD23BP54727 409 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 MAGOHP61326 146 aaKnown RBP12.88□□□□□ -0.35
PBX1-211ENST00000498497 CKAP4Q07065 602 aaKnown RBP12.88□□□□□ -0.35
PBX1-211ENST00000498497 ZMYM1Q5SVZ6 1142 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 MAGOHBQ96A72 148 aaKnown RBP12.88□□□□□ -0.35
PBX1-211ENST00000498497 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.88□□□□□ -0.35
PBX1-211ENST00000498497 SERTAD1Q9UHV2 236 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 REXO2Q9Y3B8 237 aaKnown RBP12.88□□□□□ -0.35
PBX1-211ENST00000498497 PTPRGP23470 1445 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 CARMIL2Q6F5E8 1435 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 GOLGA6L10A0A0M3HER8 536 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 UBE2Q2LH0YL09 131 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 CETN3O15182 167 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 HEXIM1O94992 359 aaKnown RBP12.88□□□□□ -0.35
PBX1-211ENST00000498497 NDUFA10O95299 355 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 CYP21A2P08686 494 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 ZCCHC18P0CG32 403 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 EPHB4P54760 987 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 CTNNBL1Q8WYA6 563 aaPredicted RBP12.88□□□□□ -0.35
PBX1-211ENST00000498497 RBM12Q9NTZ6 932 aaKnown RBP12.88□□□□□ -0.35
PBX1-211ENST00000498497 UBAP1Q9NZ09 502 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 UBOX5O94941 541 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 CYP11B2P19099 503 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 ALDH3A1P30838 453 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 PAK2Q13177 524 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 BYSLQ13895 437 aaKnown RBP12.88□□□□□ -0.35
PBX1-211ENST00000498497 SFMBT2Q5VUG0 894 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 MTHFD1LQ6UB35 978 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 TRIM31Q9BZY9 425 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 LRRC4CQ9HCJ2 640 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 METTL5Q9NRN9 209 aaKnown RBP12.88□□□□□ -0.35
PBX1-211ENST00000498497 ABHD10Q9NUJ1 306 aa12.88□□□□□ -0.35
PBX1-211ENST00000498497 NKX1-2Q9UD57 310 aaPredicted RBP12.88□□□□□ -0.35
PBX1-211ENST00000498497 LRRC10BA6NIK2 292 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 NDUFB5O43674 189 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 SDCCAG8Q86SQ7 713 aaPredicted RBP12.87□□□□□ -0.35
PBX1-211ENST00000498497 SPATA4Q8NEY3 305 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 WHAMMQ8TF30 809 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
PBX1-211ENST00000498497 L3MBTL3Q96JM7 780 aaPredicted RBP12.87□□□□□ -0.35
PBX1-211ENST00000498497 PANX2Q96RD6 677 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 RIMS2Q9UQ26 1411 aa12.87□□□□□ -0.35
PBX1-211ENST00000498497 GCOM1H8Y6P7 765 aaPredicted RBP12.87□□□□□ -0.35
PBX1-211ENST00000498497 LSM1O15116 133 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms