RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 MAPK4P31152 587 aa23.16■■□□□ 1.3
HLA-B-255ENST00000498007 SLC16A2P36021 539 aa23.16■■□□□ 1.3
HLA-B-255ENST00000498007 PRKCZQ05513 592 aa23.16■■□□□ 1.3
HLA-B-255ENST00000498007 PKN2Q16513 984 aaKnown RBP23.16■■□□□ 1.3
HLA-B-255ENST00000498007 REPS2Q8NFH8 660 aa23.16■■□□□ 1.3
HLA-B-255ENST00000498007 TMEM87BQ96K49 555 aa23.16■■□□□ 1.3
HLA-B-255ENST00000498007 MOV10L1Q9BXT6 1211 aaKnown RBP23.16■■□□□ 1.3
HLA-B-255ENST00000498007 LY9Q9HBG7 655 aa23.16■■□□□ 1.3
HLA-B-255ENST00000498007 PLXNB2O15031 1838 aa23.16■■□□□ 1.3
HLA-B-255ENST00000498007 HTTP42858 3142 aa23.15■■□□□ 1.3
HLA-B-255ENST00000498007 HOXD10P28358 340 aa23.15■■□□□ 1.3
HLA-B-255ENST00000498007 FBXO46Q6PJ61 603 aaPredicted RBP23.15■■□□□ 1.3
HLA-B-255ENST00000498007 NFXL1Q6ZNB6 911 aa23.15■■□□□ 1.3
HLA-B-255ENST00000498007 SRRDQ9UH36 339 aa23.15■■□□□ 1.3
HLA-B-255ENST00000498007 PRR12Q9ULL5 1215 aa23.15■■□□□ 1.3
HLA-B-255ENST00000498007 PTPN22Q9Y2R2 807 aa23.15■■□□□ 1.3
HLA-B-255ENST00000498007 PTCH2Q9Y6C5 1203 aa23.15■■□□□ 1.3
HLA-B-255ENST00000498007 PLA2G6O60733 806 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 EIF5BO60841 1220 aaKnown RBP23.14■■□□□ 1.29
HLA-B-255ENST00000498007 PARP1P09874 1014 aaKnown RBP23.14■■□□□ 1.29
HLA-B-255ENST00000498007 CPA1P15085 419 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 SLC4A3P48751 1232 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 SNAP25P60880 206 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 C8orf34Q49A92 452 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 GPATCH4Q5T3I0 446 aaKnown RBP23.14■■□□□ 1.29
HLA-B-255ENST00000498007 SYDE2Q5VT97 1194 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 DHX32Q7L7V1 743 aaKnown RBP23.14■■□□□ 1.29
HLA-B-255ENST00000498007 GPR142Q7Z601 462 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 CATIPQ7Z7H3 387 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 NCAPG2Q86XI2 1143 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 CPXCR1Q8N123 301 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 MTA3Q9BTC8 594 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 SLC38A10Q9HBR0 1119 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 ZNF214Q9UL59 606 aaPredicted RBP23.14■■□□□ 1.29
HLA-B-255ENST00000498007 GABRQQ9UN88 632 aa23.14■■□□□ 1.29
HLA-B-255ENST00000498007 CCDC69A6NI79 296 aa23.13■■□□□ 1.29
HLA-B-255ENST00000498007 SEC24BO95487 1268 aa23.13■■□□□ 1.29
HLA-B-255ENST00000498007 HMGB1P09429 215 aaKnown RBP23.13■■□□□ 1.29
HLA-B-255ENST00000498007 ERCC3P19447 782 aa23.13■■□□□ 1.29
HLA-B-255ENST00000498007 STAT3P40763 770 aa23.13■■□□□ 1.29
HLA-B-255ENST00000498007 ASPRV1Q53RT3 343 aa23.13■■□□□ 1.29
HLA-B-255ENST00000498007 SNRNP48Q6IEG0 339 aaKnown RBP23.13■■□□□ 1.29
HLA-B-255ENST00000498007 CCDC174Q6PII3 467 aa23.13■■□□□ 1.29
HLA-B-255ENST00000498007 BLOC1S2Q6QNY1 142 aa23.13■■□□□ 1.29
HLA-B-255ENST00000498007 PLEKHH3Q7Z736 793 aa23.13■■□□□ 1.29
HLA-B-255ENST00000498007 TEX13BQ9BXU2 312 aa23.13■■□□□ 1.29
HLA-B-255ENST00000498007 CPVLQ9H3G5 476 aa23.13■■□□□ 1.29
HLA-B-255ENST00000498007 RAVER2Q9HCJ3 691 aaKnown RBP23.13■■□□□ 1.29
HLA-B-255ENST00000498007 WDR19Q8NEZ3 1342 aa23.12■■□□□ 1.29
HLA-B-255ENST00000498007 CASTP20810 708 aaKnown RBP23.12■■□□□ 1.29
HLA-B-255ENST00000498007 PRMT2P55345 433 aa23.12■■□□□ 1.29
HLA-B-255ENST00000498007 BTNL9Q6UXG8 535 aa23.12■■□□□ 1.29
HLA-B-255ENST00000498007 ZNF654Q8IZM8 581 aa23.12■■□□□ 1.29
HLA-B-255ENST00000498007 RAET1EQ8TD07 263 aa23.12■■□□□ 1.29
HLA-B-255ENST00000498007 NUP133Q8WUM0 1156 aa23.12■■□□□ 1.29
HLA-B-255ENST00000498007 MYL10Q9BUA6 226 aa23.12■■□□□ 1.29
HLA-B-255ENST00000498007 IVNS1ABPQ9Y6Y0 642 aa23.12■■□□□ 1.29
HLA-B-255ENST00000498007 DOCK3Q8IZD9 2030 aa23.11■■□□□ 1.29
HLA-B-255ENST00000498007 PSMA5P28066 241 aa23.11■■□□□ 1.29
HLA-B-255ENST00000498007 FLT3LGP49771 235 aa23.11■■□□□ 1.29
HLA-B-255ENST00000498007 FGD1P98174 961 aa23.11■■□□□ 1.29
HLA-B-255ENST00000498007 EXOSC10Q01780 885 aaKnown RBP23.11■■□□□ 1.29
HLA-B-255ENST00000498007 RIOX2Q8IUF8 465 aa23.11■■□□□ 1.29
HLA-B-255ENST00000498007 SHCBP1Q8NEM2 672 aa23.11■■□□□ 1.29
HLA-B-255ENST00000498007 UBA5Q9GZZ9 404 aa23.11■■□□□ 1.29
HLA-B-255ENST00000498007 DHX16O60231 1041 aaKnown RBP23.1■■□□□ 1.29
HLA-B-255ENST00000498007 SLC25A27O95847 323 aa23.1■■□□□ 1.29
HLA-B-255ENST00000498007 FDX1P10109 184 aa23.1■■□□□ 1.29
HLA-B-255ENST00000498007 LIFRP42702 1097 aa23.1■■□□□ 1.29
HLA-B-255ENST00000498007 GRM4Q14833 912 aa23.1■■□□□ 1.29
HLA-B-255ENST00000498007 STAG2Q8N3U4 1231 aa23.1■■□□□ 1.29
HLA-B-255ENST00000498007 SOCS4Q8WXH5 440 aa23.1■■□□□ 1.29
HLA-B-255ENST00000498007 RANBP17Q9H2T7 1088 aaKnown RBP23.1■■□□□ 1.29
HLA-B-255ENST00000498007 MROH8Q9H579 483 aa23.1■■□□□ 1.29
HLA-B-255ENST00000498007 HPS5Q9UPZ3 1129 aa23.1■■□□□ 1.29
HLA-B-255ENST00000498007 DDAH1O94760 285 aa23.09■■□□□ 1.29
HLA-B-255ENST00000498007 RPS6KB1P23443 525 aa23.09■■□□□ 1.29
HLA-B-255ENST00000498007 OAZ1P54368 228 aa23.09■■□□□ 1.29
HLA-B-255ENST00000498007 TROAPQ12815 778 aa23.09■■□□□ 1.29
HLA-B-255ENST00000498007 RAB11FIP4Q86YS3 637 aa23.09■■□□□ 1.29
HLA-B-255ENST00000498007 TMTC2Q8N394 836 aa23.09■■□□□ 1.29
HLA-B-255ENST00000498007 NUDT12Q9BQG2 462 aa23.09■■□□□ 1.29
HLA-B-255ENST00000498007 MAD2L2Q9UI95 211 aa23.09■■□□□ 1.29
HLA-B-255ENST00000498007 SLC12A7Q9Y666 1083 aa23.09■■□□□ 1.29
HLA-B-255ENST00000498007 ZNF236Q9UL36 1845 aa23.09■■□□□ 1.29
HLA-B-255ENST00000498007 ZNF536O15090 1300 aa23.08■■□□□ 1.29
HLA-B-255ENST00000498007 CENPFP49454 3210 aa23.08■■□□□ 1.29
HLA-B-255ENST00000498007 ATP2A1O14983 1001 aa23.08■■□□□ 1.29
HLA-B-255ENST00000498007 RXRAP19793 462 aa23.08■■□□□ 1.29
HLA-B-255ENST00000498007 COPB2P35606 906 aa23.08■■□□□ 1.29
HLA-B-255ENST00000498007 AGBL1Q96MI9 1066 aa23.08■■□□□ 1.29
HLA-B-255ENST00000498007 HOMER2Q9NSB8 354 aa23.08■■□□□ 1.29
HLA-B-255ENST00000498007 RIPK3Q9Y572 518 aa23.08■■□□□ 1.29
HLA-B-255ENST00000498007 KLRF2D3W0D1 207 aa23.07■■□□□ 1.28
HLA-B-255ENST00000498007 TAL1P17542 331 aaPredicted RBP23.07■■□□□ 1.28
HLA-B-255ENST00000498007 CYP2B6P20813 491 aa23.07■■□□□ 1.28
HLA-B-255ENST00000498007 PTPREP23469 700 aa23.07■■□□□ 1.28
HLA-B-255ENST00000498007 SLC9C1Q4G0N8 1177 aa23.07■■□□□ 1.28
HLA-B-255ENST00000498007 Q6ZUG5 572 aa23.07■■□□□ 1.28
HLA-B-255ENST00000498007 SGMS1Q86VZ5 419 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms