RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 SPACA3Q8IXA5 215 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 PLD6Q8N2A8 252 aaKnown RBP10.36□□□□□ -0.75
GARNL3-221ENST00000497703 ARHGEF39Q8N4T4 335 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 HSPA12BQ96MM6 686 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 ZDHHC15Q96MV8 337 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 SLC26A8Q96RN1 970 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 ZSWIM5Q9P217 1185 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 CGGBP1Q9UFW8 167 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-221ENST00000497703 TBX22Q9Y458 520 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 DIAPH1O60610 1272 aaKnown RBP10.35□□□□□ -0.75
GARNL3-221ENST00000497703 ITGAVP06756 1048 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 AMPD2Q01433 879 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 GRB10Q13322 594 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 LONRF2Q1L5Z9 754 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 SDE2Q6IQ49 451 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 INTS5Q6P9B9 1019 aaKnown RBP10.35□□□□□ -0.75
GARNL3-221ENST00000497703 JAZF1Q86VZ6 243 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 ZNF227Q86WZ6 799 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 ZSWIM2Q8NEG5 633 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 ASB11Q8WXH4 323 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 HRASLS5Q96KN8 279 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 CDC6Q99741 560 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 ZC3H7BQ9UGR2 993 aaKnown RBP10.35□□□□□ -0.75
GARNL3-221ENST00000497703 EMC9Q9Y3B6 208 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 ST14Q9Y5Y6 855 aa10.35□□□□□ -0.75
GARNL3-221ENST00000497703 TRAV20A0A0B4J274 112 aa10.34□□□□□ -0.75
GARNL3-221ENST00000497703 PRR19A6NJB7 356 aa10.34□□□□□ -0.75
GARNL3-221ENST00000497703 KCNH1O95259 989 aa10.34□□□□□ -0.75
GARNL3-221ENST00000497703 TGFB1P01137 390 aa10.34□□□□□ -0.75
GARNL3-221ENST00000497703 TPP2P29144 1249 aaPredicted RBP10.34□□□□□ -0.75
GARNL3-221ENST00000497703 LTKP29376 864 aa10.34□□□□□ -0.75
GARNL3-221ENST00000497703 NOP2P46087 812 aaKnown RBP10.34□□□□□ -0.75
GARNL3-221ENST00000497703 TSPYL5Q86VY4 417 aaPredicted RBP10.34□□□□□ -0.75
GARNL3-221ENST00000497703 HOMER1Q86YM7 354 aa10.34□□□□□ -0.75
GARNL3-221ENST00000497703 LILRB2Q8N423 598 aa10.34□□□□□ -0.75
GARNL3-221ENST00000497703 UBE2FQ969M7 185 aa10.34□□□□□ -0.75
GARNL3-221ENST00000497703 SYTL4Q96C24 671 aaPredicted RBP10.34□□□□□ -0.75
GARNL3-221ENST00000497703 MISP3Q96FF7 219 aa10.34□□□□□ -0.75
GARNL3-221ENST00000497703 AARSD1Q9BTE6 412 aaKnown RBP10.34□□□□□ -0.75
GARNL3-221ENST00000497703 HDAC8Q9BY41 377 aa10.34□□□□□ -0.75
GARNL3-221ENST00000497703 A0A1W2PQU0 124 aa10.33□□□□□ -0.76
GARNL3-221ENST00000497703 SRFP11831 508 aa10.33□□□□□ -0.76
GARNL3-221ENST00000497703 PCBP3P57721 371 aaKnown RBP10.33□□□□□ -0.76
GARNL3-221ENST00000497703 TAF7LQ5H9L4 462 aa10.33□□□□□ -0.76
GARNL3-221ENST00000497703 TMPRSS7Q7RTY8 843 aa10.33□□□□□ -0.76
GARNL3-221ENST00000497703 TRIM59Q8IWR1 403 aa10.33□□□□□ -0.76
GARNL3-221ENST00000497703 ZBTB38Q8NAP3 1195 aaPredicted RBP10.33□□□□□ -0.76
GARNL3-221ENST00000497703 APPBP2Q92624 585 aa10.33□□□□□ -0.76
GARNL3-221ENST00000497703 RNPC3Q96LT9 517 aaKnown RBP10.33□□□□□ -0.76
GARNL3-221ENST00000497703 DUSP15Q9H1R2 295 aaPredicted RBP10.33□□□□□ -0.76
GARNL3-221ENST00000497703 DUSP13Q9UII6 198 aa10.33□□□□□ -0.76
GARNL3-221ENST00000497703 SHISA3A0PJX4 238 aa10.32□□□□□ -0.76
GARNL3-221ENST00000497703 ENDOUP21128 410 aaKnown RBP10.32□□□□□ -0.76
GARNL3-221ENST00000497703 PPP2R2AP63151 447 aa10.32□□□□□ -0.76
GARNL3-221ENST00000497703 PLAGL2Q9UPG8 496 aa10.32□□□□□ -0.76
GARNL3-221ENST00000497703 CUX2O14529 1486 aa10.31□□□□□ -0.76
GARNL3-221ENST00000497703 COBLO75128 1261 aa10.31□□□□□ -0.76
GARNL3-221ENST00000497703 CDC45O75419 566 aa10.31□□□□□ -0.76
GARNL3-221ENST00000497703 PRKCQQ04759 706 aa10.31□□□□□ -0.76
GARNL3-221ENST00000497703 STK11IPQ8N1F8 1099 aa10.31□□□□□ -0.76
GARNL3-221ENST00000497703 TCTN2Q96GX1 697 aa10.31□□□□□ -0.76
GARNL3-221ENST00000497703 CCDC140Q96MF4 163 aa10.31□□□□□ -0.76
GARNL3-221ENST00000497703 VAV3Q9UKW4 847 aa10.31□□□□□ -0.76
GARNL3-221ENST00000497703 U3KQE9 123 aa10.31□□□□□ -0.76
GARNL3-221ENST00000497703 CCDC163A0A0D9SF12 145 aa10.3□□□□□ -0.76
GARNL3-221ENST00000497703 H0Y8X5 98 aa10.3□□□□□ -0.76
GARNL3-221ENST00000497703 AOC3Q16853 763 aa10.3□□□□□ -0.76
GARNL3-221ENST00000497703 TMEM67Q5HYA8 995 aa10.3□□□□□ -0.76
GARNL3-221ENST00000497703 CRTC3Q6UUV7 619 aa10.3□□□□□ -0.76
GARNL3-221ENST00000497703 ZNF513Q8N8E2 541 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-221ENST00000497703 BSDC1Q9NW68 430 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-221ENST00000497703 PTCH2Q9Y6C5 1203 aa10.3□□□□□ -0.76
GARNL3-221ENST00000497703 PITPNM2Q9BZ72 1349 aa10.3□□□□□ -0.76
GARNL3-221ENST00000497703 UNC13AQ9UPW8 1703 aa10.3□□□□□ -0.76
GARNL3-221ENST00000497703 CD3EP07766 207 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 HSD3B2P26439 372 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 BMP8BP34820 402 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 KCNJ6P48051 423 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 GTF2IRD2BQ6EKJ0 949 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 RNF111Q6ZNA4 994 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 GTF2IRD2Q86UP8 949 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 CREG2Q8IUH2 290 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 BTN2A2Q8WVV5 523 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 MRGPRX3Q96LB0 322 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 SLKQ9H2G2 1235 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-221ENST00000497703 MINPP1Q9UNW1 487 aa10.29□□□□□ -0.76
GARNL3-221ENST00000497703 ENPP3O14638 875 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 SYPP08247 313 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 FAM153BP0C7A2 387 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 HOXC12P31275 282 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 DPY19L1Q2PZI1 675 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 JMYQ8N9B5 988 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 ARHGEF4Q9NR80 690 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 FANCLQ9NW38 375 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 TMEM260Q9NX78 707 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 TCFL5Q9UL49 500 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 RNF112Q9ULX5 631 aa10.28□□□□□ -0.76
GARNL3-221ENST00000497703 GPR55Q9Y2T6 319 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-221ENST00000497703 ADCY3O60266 1144 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 CPP00450 1065 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms