RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 TOP1P11387 765 aaKnown RBP7.14□□□□□ -1.27
HMGCL-206ENST00000496907 CCL5P13501 91 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 OSBPP22059 807 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 HOXA7P31268 230 aaPredicted RBP7.14□□□□□ -1.27
HMGCL-206ENST00000496907 MCM5P33992 734 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 HSPA4P34932 840 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 PRMT2P55345 433 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 PTH1RQ03431 593 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 ICA1Q05084 483 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 CTDSPL2Q05D32 466 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 PPP2R5BQ15173 497 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 ARSIQ5FYB1 569 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 PKD1L2Q7Z442 2459 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 PRRT2Q7Z6L0 340 aaPredicted RBP7.14□□□□□ -1.27
HMGCL-206ENST00000496907 ANKRD23Q86SG2 305 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 WDR19Q8NEZ3 1342 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 RAET1EQ8TD07 263 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 ANKS1AQ92625 1134 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 KCNB2Q92953 911 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 C12orf42Q96LP6 360 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 NEK1Q96PY6 1258 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 FEZ1Q99689 392 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 USP26Q9BXU7 913 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 TM6SF1Q9BZW5 370 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 RNF208Q9H0X6 261 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 DNAJC18Q9H819 358 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 MTMR4Q9NYA4 1195 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 PLIN4Q96Q06 1357 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 CYP2D7A0A087X1C5 515 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 FAM196BA6NMK8 535 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 USP17L15C9J2P7 530 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 USP17L13C9JLJ4 530 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 USP17L11C9JVI0 530 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 USP17L18D6R9N7 530 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 USP17L22D6RA61 530 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 USP17L17D6RBQ6 530 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 USP17L19D6RCP7 530 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 USP17L20D6RJB6 530 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 SLC27A2O14975 620 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 TLR2O60603 784 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 GDF11O95390 407 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 FMNL1O95466 1100 aaPredicted RBP7.13□□□□□ -1.27
HMGCL-206ENST00000496907 GJB1P08034 283 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 AKR1B1P15121 316 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 GRK4P32298 578 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 GJA8P48165 433 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 GCLCP48506 637 aaPredicted RBP7.13□□□□□ -1.27
HMGCL-206ENST00000496907 NOVP48745 357 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 HAND2P61296 217 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 USP17L24Q0WX57 530 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 TRAF1Q13077 416 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 SEPT2Q15019 361 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 LRIT3Q3SXY7 679 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 TJAP1Q5JTD0 557 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 RRP12Q5JTH9 1297 aaKnown RBP7.13□□□□□ -1.27
HMGCL-206ENST00000496907 SYNE3Q6ZMZ3 975 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 DHX32Q7L7V1 743 aaKnown RBP7.13□□□□□ -1.27
HMGCL-206ENST00000496907 FBXL16Q8N461 479 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 CHURC1Q8WUH1 139 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 ZSCAN10Q96SZ4 725 aaPredicted RBP7.13□□□□□ -1.27
HMGCL-206ENST00000496907 MAP3K14Q99558 947 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 P2RX7Q99572 595 aaKnown RBP7.13□□□□□ -1.27
HMGCL-206ENST00000496907 TSHZ2Q9NRE2 1034 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 ZSWIM5Q9P217 1185 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 CLIP2Q9UDT6 1046 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 ZMYND8Q9ULU4 1186 aaPredicted RBP7.13□□□□□ -1.27
HMGCL-206ENST00000496907 STX8Q9UNK0 236 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 AGTPBP1Q9UPW5 1226 aa7.13□□□□□ -1.27
HMGCL-206ENST00000496907 MYPNQ86TC9 1320 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 IGKV6D-41A0A0C4DH26 115 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 TRIM75PA6NK02 468 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 F5H6K3 240 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 IFIT3O14879 490 aaKnown RBP7.12□□□□□ -1.27
HMGCL-206ENST00000496907 WDR46O15213 610 aaKnown RBP7.12□□□□□ -1.27
HMGCL-206ENST00000496907 PLA2G6O60733 806 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 KDM4AO75164 1064 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 PRDM1O75626 825 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 CALM1P0DP23 149 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 CALM2P0DP24 149 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 CALM3P0DP25 149 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 EEF2P13639 858 aaKnown RBP7.12□□□□□ -1.27
HMGCL-206ENST00000496907 PBX2P40425 430 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 LIFRP42702 1097 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 PSMC4P43686 418 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 MRE11P49959 708 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 GNAQP50148 359 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 UBXN2AP68543 259 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 FGD1P98174 961 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 ATP2B2Q01814 1243 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 KLRC3Q07444 240 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 COG2Q14746 738 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 ANKRD1Q15327 319 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 GPATCH4Q5T3I0 446 aaKnown RBP7.12□□□□□ -1.27
HMGCL-206ENST00000496907 BLOC1S2Q6QNY1 142 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 UBE2Q1Q7Z7E8 422 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 FAM160B2Q86V87 743 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 SKAP1Q86WV1 359 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 SLC44A5Q8NCS7 719 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 GMCL1P1Q8NEA9 526 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 U2AF1L4Q8WU68 220 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms