RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 IKQ13123 557 aaPredicted RBP21.19■□□□□ 0.98
RGP1-202ENST00000496906 SYDE2Q5VT97 1194 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 FAM160B2Q86V87 743 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 ADGRF4Q8IZF3 695 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 CHURC1Q8WUH1 139 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 DDX11Q96FC9 970 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 SLC26A6Q9BXS9 759 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 FBXO28Q9NVF7 368 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 FAM155AB1AL88 458 aaPredicted RBP21.19■□□□□ 0.98
RGP1-202ENST00000496906 FDPSP14324 419 aaKnown RBP21.19■□□□□ 0.98
RGP1-202ENST00000496906 SSRP1Q08945 709 aaKnown RBP21.19■□□□□ 0.98
RGP1-202ENST00000496906 CATSPERGQ6ZRH7 1159 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 TRIM22Q8IYM9 498 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 CCDC102AQ96A19 550 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 AGTPBP1Q9UPW5 1226 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 CCL15-CCL14A0A0B4J2E2 113 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 USP17L15C9J2P7 530 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 USP17L13C9JLJ4 530 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 USP17L11C9JVI0 530 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 USP17L18D6R9N7 530 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 USP17L22D6RA61 530 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 USP17L17D6RBQ6 530 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 USP17L19D6RCP7 530 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 USP17L20D6RJB6 530 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 PRPF3O43395 683 aaKnown RBP21.18■□□□□ 0.98
RGP1-202ENST00000496906 GJB2P29033 226 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 HOXA7P31268 230 aaPredicted RBP21.18■□□□□ 0.98
RGP1-202ENST00000496906 USP17L24Q0WX57 530 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 CCL15Q16663 113 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 BRI3BPQ8WY22 251 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 MTMR8Q96EF0 704 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 SLF1Q9BQI6 1058 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 JMJD4Q9H9V9 463 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 ORC3Q9UBD5 711 aaPredicted RBP21.18■□□□□ 0.98
RGP1-202ENST00000496906 PRR12Q9ULL5 1215 aa21.18■□□□□ 0.98
RGP1-202ENST00000496906 V9GY48 417 aaPredicted RBP21.18■□□□□ 0.98
RGP1-202ENST00000496906 RASSF10A6NK89 507 aa21.17■□□□□ 0.98
RGP1-202ENST00000496906 FLOT1O75955 427 aa21.17■□□□□ 0.98
RGP1-202ENST00000496906 GPAT2Q6NUI2 795 aa21.17■□□□□ 0.98
RGP1-202ENST00000496906 KIFC2Q96AC6 838 aa21.17■□□□□ 0.98
RGP1-202ENST00000496906 VAT1LQ9HCJ6 419 aa21.17■□□□□ 0.98
RGP1-202ENST00000496906 RBM27Q9P2N5 1060 aaKnown RBP21.17■□□□□ 0.98
RGP1-202ENST00000496906 BAZ2BQ9UIF8 2168 aaKnown RBP21.16■□□□□ 0.98
RGP1-202ENST00000496906 hCG_1642624A0A1W2PR95 340 aa21.16■□□□□ 0.98
RGP1-202ENST00000496906 DEXIO95424 95 aa21.16■□□□□ 0.98
RGP1-202ENST00000496906 AKAP17AQ02040 695 aaKnown RBP21.16■□□□□ 0.98
RGP1-202ENST00000496906 PRPF38AQ8NAV1 312 aaKnown RBP21.16■□□□□ 0.98
RGP1-202ENST00000496906 RRP36Q96EU6 259 aaKnown RBP21.16■□□□□ 0.98
RGP1-202ENST00000496906 PIGSQ96S52 555 aa21.16■□□□□ 0.98
RGP1-202ENST00000496906 PPP1R9AQ9ULJ8 1098 aa21.16■□□□□ 0.98
RGP1-202ENST00000496906 TESPA1A2RU30 521 aaPredicted RBP21.15■□□□□ 0.98
RGP1-202ENST00000496906 HSPA6P17066 643 aa21.15■□□□□ 0.98
RGP1-202ENST00000496906 PKN1Q16512 942 aa21.15■□□□□ 0.98
RGP1-202ENST00000496906 HOMER1Q86YM7 354 aa21.15■□□□□ 0.98
RGP1-202ENST00000496906 PIBF1Q8WXW3 757 aa21.15■□□□□ 0.98
RGP1-202ENST00000496906 MANSC4A6NHS7 340 aaPredicted RBP21.14■□□□□ 0.98
RGP1-202ENST00000496906 DSG3P32926 999 aa21.14■□□□□ 0.98
RGP1-202ENST00000496906 COG2Q14746 738 aa21.14■□□□□ 0.98
RGP1-202ENST00000496906 DEFB115Q30KQ5 88 aa21.14■□□□□ 0.98
RGP1-202ENST00000496906 CYP4F22Q6NT55 531 aa21.14■□□□□ 0.98
RGP1-202ENST00000496906 FAM184AQ8NB25 1140 aa21.14■□□□□ 0.98
RGP1-202ENST00000496906 MYPNQ86TC9 1320 aa21.14■□□□□ 0.97
RGP1-202ENST00000496906 PARP14Q460N5 1801 aa21.14■□□□□ 0.97
RGP1-202ENST00000496906 BTBD19C9JJ37 291 aa21.14■□□□□ 0.97
RGP1-202ENST00000496906 ZBTB5O15062 677 aa21.14■□□□□ 0.97
RGP1-202ENST00000496906 PABPC4Q13310 644 aaKnown RBP eCLIP21.14■□□□□ 0.97
RGP1-202ENST00000496906 CDC37Q16543 378 aaPredicted RBP21.14■□□□□ 0.97
RGP1-202ENST00000496906 PFKFB3Q16875 520 aaPredicted RBP21.14■□□□□ 0.97
RGP1-202ENST00000496906 SAMD1Q6SPF0 538 aaPredicted RBP21.14■□□□□ 0.97
RGP1-202ENST00000496906 PAXIP1Q6ZW49 1069 aaPredicted RBP21.14■□□□□ 0.97
RGP1-202ENST00000496906 ANKRD23Q86SG2 305 aa21.14■□□□□ 0.97
RGP1-202ENST00000496906 RANBP17Q9H2T7 1088 aaKnown RBP21.14■□□□□ 0.97
RGP1-202ENST00000496906 CWC22Q9HCG8 908 aaKnown RBP21.14■□□□□ 0.97
RGP1-202ENST00000496906 SEC63Q9UGP8 760 aaKnown RBP21.14■□□□□ 0.97
RGP1-202ENST00000496906 SLC45A1Q9Y2W3 748 aa21.14■□□□□ 0.97
RGP1-202ENST00000496906 RLFQ13129 1914 aa21.14■□□□□ 0.97
RGP1-202ENST00000496906 SPDYE16A6NNV3 312 aaPredicted RBP21.13■□□□□ 0.97
RGP1-202ENST00000496906 SCG2P13521 617 aa21.13■□□□□ 0.97
RGP1-202ENST00000496906 WASF1Q92558 559 aa21.13■□□□□ 0.97
RGP1-202ENST00000496906 ATG4CQ96DT6 458 aa21.13■□□□□ 0.97
RGP1-202ENST00000496906 AIFM3Q96NN9 605 aa21.13■□□□□ 0.97
RGP1-202ENST00000496906 PTPN18Q99952 460 aa21.13■□□□□ 0.97
RGP1-202ENST00000496906 ASCC2Q9H1I8 757 aaPredicted RBP21.13■□□□□ 0.97
RGP1-202ENST00000496906 KIF3AQ9Y496 699 aa21.13■□□□□ 0.97
RGP1-202ENST00000496906 PNMA6FA0A0J9YX94 578 aa21.12■□□□□ 0.97
RGP1-202ENST00000496906 SNAP25P60880 206 aa21.12■□□□□ 0.97
RGP1-202ENST00000496906 IRX3P78415 501 aaPredicted RBP21.12■□□□□ 0.97
RGP1-202ENST00000496906 QRICH1Q2TAL8 776 aa21.12■□□□□ 0.97
RGP1-202ENST00000496906 ALG1Q9BT22 464 aa21.12■□□□□ 0.97
RGP1-202ENST00000496906 HOXC10Q9NYD6 342 aa21.12■□□□□ 0.97
RGP1-202ENST00000496906 ADAMTS5Q9UNA0 930 aa21.12■□□□□ 0.97
RGP1-202ENST00000496906 PPP1R11O60927 126 aaPredicted RBP21.11■□□□□ 0.97
RGP1-202ENST00000496906 FDX1P10109 184 aa21.11■□□□□ 0.97
RGP1-202ENST00000496906 HTRA3P83110 453 aa21.11■□□□□ 0.97
RGP1-202ENST00000496906 FAM43AQ8N2R8 423 aa21.11■□□□□ 0.97
RGP1-202ENST00000496906 CAPNS2Q96L46 248 aa21.11■□□□□ 0.97
RGP1-202ENST00000496906 SLC38A10Q9HBR0 1119 aa21.11■□□□□ 0.97
RGP1-202ENST00000496906 PDHXO00330 501 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 VWA5AO00534 786 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 OSBPP22059 807 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms