RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 RBBP6Q7Z6E9 1792 aaKnown RBP16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 CCL15-CCL14A0A0B4J2E2 113 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 TESPA1A2RU30 521 aaPredicted RBP16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 USP17L15C9J2P7 530 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 USP17L11C9JVI0 530 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 USP17L18D6R9N7 530 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 USP17L22D6RA61 530 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 USP17L19D6RCP7 530 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 USP17L20D6RJB6 530 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 HOXA7P31268 230 aaPredicted RBP16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 USP17L24Q0WX57 530 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 CCL15Q16663 113 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 DEFB115Q30KQ5 88 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 CYP4F22Q6NT55 531 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 CPLX2Q6PUV4 134 aaKnown RBP16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 FAM160B2Q86V87 743 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 CCDC82Q8N4S0 544 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 CHURC1Q8WUH1 139 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 TANGO6Q9C0B7 1094 aa16.21■□□□□ 0.18
ATPAF2-208ENST00000496852 MANSC4A6NHS7 340 aaPredicted RBP16.2■□□□□ 0.18
ATPAF2-208ENST00000496852 DTNBO60941 627 aa16.2■□□□□ 0.18
ATPAF2-208ENST00000496852 CDKL5O76039 1030 aa16.2■□□□□ 0.18
ATPAF2-208ENST00000496852 ADGRF4Q8IZF3 695 aa16.2■□□□□ 0.18
ATPAF2-208ENST00000496852 PHKBQ93100 1093 aa16.2■□□□□ 0.18
ATPAF2-208ENST00000496852 RNF26Q9BY78 433 aaPredicted RBP16.2■□□□□ 0.18
ATPAF2-208ENST00000496852 PRR12Q9ULL5 1215 aa16.2■□□□□ 0.18
ATPAF2-208ENST00000496852 STK36Q9NRP7 1315 aa16.19■□□□□ 0.18
ATPAF2-208ENST00000496852 PTPDC1A2A3K4 754 aa16.19■□□□□ 0.18
ATPAF2-208ENST00000496852 JAK2O60674 1132 aa16.19■□□□□ 0.18
ATPAF2-208ENST00000496852 FLOT1O75955 427 aa16.19■□□□□ 0.18
ATPAF2-208ENST00000496852 FMNL1O95466 1100 aaPredicted RBP16.19■□□□□ 0.18
ATPAF2-208ENST00000496852 SYDE2Q5VT97 1194 aa16.19■□□□□ 0.18
ATPAF2-208ENST00000496852 MTMR8Q96EF0 704 aa16.19■□□□□ 0.18
ATPAF2-208ENST00000496852 SLF1Q9BQI6 1058 aa16.19■□□□□ 0.18
ATPAF2-208ENST00000496852 JMJD4Q9H9V9 463 aa16.19■□□□□ 0.18
ATPAF2-208ENST00000496852 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.19■□□□□ 0.18
ATPAF2-208ENST00000496852 BTBD19C9JJ37 291 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 PRPF3O43395 683 aaKnown RBP16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 PPFIA3O75145 1194 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 FDPSP14324 419 aaKnown RBP16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 IKQ13123 557 aaPredicted RBP16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 PAXIP1Q6ZW49 1069 aaPredicted RBP16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 ANKRD23Q86SG2 305 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 PRPF38AQ8NAV1 312 aaKnown RBP16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 SLC26A6Q9BXS9 759 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 PPP1R9AQ9ULJ8 1098 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 SLC45A1Q9Y2W3 748 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 MYPNQ86TC9 1320 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 DSG3P32926 999 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 SSRP1Q08945 709 aaKnown RBP16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 COG2Q14746 738 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 TRIM22Q8IYM9 498 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 KIFC2Q96AC6 838 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 CAPNS2Q96L46 248 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 PTPN18Q99952 460 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 VAT1LQ9HCJ6 419 aa16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 V9GY48 417 aaPredicted RBP16.18■□□□□ 0.18
ATPAF2-208ENST00000496852 ZNFX1Q9P2E3 1918 aaKnown RBP16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 SPDYE16A6NNV3 312 aaPredicted RBP16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 INHBEP58166 350 aa16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 HMGN5P82970 282 aaKnown RBP16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 HTRA3P83110 453 aa16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 PABPC4Q13310 644 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 DDX11Q96FC9 970 aa16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 PIGSQ96S52 555 aa16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 ZIC5Q96T25 663 aa16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 ASCC2Q9H1I8 757 aaPredicted RBP16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 RANBP17Q9H2T7 1088 aaKnown RBP16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 ORC3Q9UBD5 711 aaPredicted RBP16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 ADAMTS5Q9UNA0 930 aa16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 SMC3Q9UQE7 1217 aa16.17■□□□□ 0.18
ATPAF2-208ENST00000496852 hCG_1642624A0A1W2PR95 340 aa16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 DEXIO95424 95 aa16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 GJB2P29033 226 aa16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 C1QTNF8P60827 252 aa16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 NOGQ13253 232 aa16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 GRM1Q13255 1194 aa16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 PKN1Q16512 942 aa16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 ATG4CQ96DT6 458 aa16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 RRP36Q96EU6 259 aaKnown RBP16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 HOXC10Q9NYD6 342 aa16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 RBM27Q9P2N5 1060 aaKnown RBP16.16■□□□□ 0.18
ATPAF2-208ENST00000496852 MYH15Q9Y2K3 1946 aa16.15■□□□□ 0.18
ATPAF2-208ENST00000496852 PDHXO00330 501 aa16.15■□□□□ 0.18
ATPAF2-208ENST00000496852 IGF2BP3O00425 579 aaKnown RBP eCLIP16.15■□□□□ 0.18
ATPAF2-208ENST00000496852 ZBTB5O15062 677 aa16.15■□□□□ 0.18
ATPAF2-208ENST00000496852 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
ATPAF2-208ENST00000496852 KIF23Q02241 960 aaPredicted RBP16.15■□□□□ 0.18
ATPAF2-208ENST00000496852 CDC37Q16543 378 aaPredicted RBP16.15■□□□□ 0.18
ATPAF2-208ENST00000496852 HOMER1Q86YM7 354 aa16.15■□□□□ 0.18
ATPAF2-208ENST00000496852 PIBF1Q8WXW3 757 aa16.15■□□□□ 0.18
ATPAF2-208ENST00000496852 PNMA6FA0A0J9YX94 578 aa16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 VWA5AO00534 786 aa16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 FDX1P10109 184 aa16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 OSBPP22059 807 aa16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 TM4SF4P48230 202 aa16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 SNAP25P60880 206 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms