RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 HTATIP2Q9BUP3 242 aa23.15■■□□□ 1.3
COL20A1-208ENST00000496810 STX8Q9UNK0 236 aa23.15■■□□□ 1.3
COL20A1-208ENST00000496810 PFASO15067 1338 aa23.14■■□□□ 1.3
COL20A1-208ENST00000496810 RRP12Q5JTH9 1297 aaKnown RBP23.14■■□□□ 1.29
COL20A1-208ENST00000496810 TICAM2Q86XR7 235 aa23.14■■□□□ 1.29
COL20A1-208ENST00000496810 ANKLE1Q8NAG6 615 aa23.14■■□□□ 1.29
COL20A1-208ENST00000496810 PCDH10Q9P2E7 1040 aa23.14■■□□□ 1.29
COL20A1-208ENST00000496810 SYNPO2Q9UMS6 1093 aa23.14■■□□□ 1.29
COL20A1-208ENST00000496810 SLC25A27O95847 323 aa23.13■■□□□ 1.29
COL20A1-208ENST00000496810 FCER1AP12319 257 aa23.13■■□□□ 1.29
COL20A1-208ENST00000496810 OLFML2BQ68BL8 750 aa23.13■■□□□ 1.29
COL20A1-208ENST00000496810 SNRNP48Q6IEG0 339 aaKnown RBP23.13■■□□□ 1.29
COL20A1-208ENST00000496810 NECAB2Q7Z6G3 386 aa23.13■■□□□ 1.29
COL20A1-208ENST00000496810 ABRAQ8N0Z2 381 aa23.13■■□□□ 1.29
COL20A1-208ENST00000496810 MAML3Q96JK9 1138 aa23.13■■□□□ 1.29
COL20A1-208ENST00000496810 MMP19Q99542 508 aa23.13■■□□□ 1.29
COL20A1-208ENST00000496810 NEDD4P46934 1319 aa23.12■■□□□ 1.29
COL20A1-208ENST00000496810 LCTP09848 1927 aa23.12■■□□□ 1.29
COL20A1-208ENST00000496810 BMP3P12645 472 aa23.12■■□□□ 1.29
COL20A1-208ENST00000496810 PRAMEF19Q5SWL8 479 aa23.12■■□□□ 1.29
COL20A1-208ENST00000496810 CPXCR1Q8N123 301 aa23.12■■□□□ 1.29
COL20A1-208ENST00000496810 PRPF38AQ8NAV1 312 aaKnown RBP23.12■■□□□ 1.29
COL20A1-208ENST00000496810 TEX13BQ9BXU2 312 aa23.12■■□□□ 1.29
COL20A1-208ENST00000496810 SLC38A10Q9HBR0 1119 aa23.12■■□□□ 1.29
COL20A1-208ENST00000496810 RAVER2Q9HCJ3 691 aaKnown RBP23.12■■□□□ 1.29
COL20A1-208ENST00000496810 TOMM22Q9NS69 142 aa23.12■■□□□ 1.29
COL20A1-208ENST00000496810 DIAPH3Q9NSV4 1193 aa23.12■■□□□ 1.29
COL20A1-208ENST00000496810 ISY1Q9ULR0 285 aaKnown RBP23.12■■□□□ 1.29
COL20A1-208ENST00000496810 COLQQ9Y215 455 aaPredicted RBP23.12■■□□□ 1.29
COL20A1-208ENST00000496810 MTMR7Q9Y216 660 aa23.12■■□□□ 1.29
COL20A1-208ENST00000496810 SLC34A2O95436 690 aa23.11■■□□□ 1.29
COL20A1-208ENST00000496810 MCCP23508 829 aa23.11■■□□□ 1.29
COL20A1-208ENST00000496810 CNGA1P29973 690 aa23.11■■□□□ 1.29
COL20A1-208ENST00000496810 NOVP48745 357 aa23.11■■□□□ 1.29
COL20A1-208ENST00000496810 SLC4A3P48751 1232 aa23.11■■□□□ 1.29
COL20A1-208ENST00000496810 ANO1Q5XXA6 986 aa23.11■■□□□ 1.29
COL20A1-208ENST00000496810 KCTD1Q719H9 257 aa23.11■■□□□ 1.29
COL20A1-208ENST00000496810 DDX20Q9UHI6 824 aaKnown RBP23.11■■□□□ 1.29
COL20A1-208ENST00000496810 FEM1BQ9UK73 627 aa23.11■■□□□ 1.29
COL20A1-208ENST00000496810 TMEM232C9JQI7 657 aa23.1■■□□□ 1.29
COL20A1-208ENST00000496810 TAL1P17542 331 aaPredicted RBP23.1■■□□□ 1.29
COL20A1-208ENST00000496810 TTC22Q5TAA0 569 aa23.1■■□□□ 1.29
COL20A1-208ENST00000496810 GMCL1Q96IK5 515 aa23.1■■□□□ 1.29
COL20A1-208ENST00000496810 C11orf49Q9H6J7 331 aa23.1■■□□□ 1.29
COL20A1-208ENST00000496810 LRRC37A2A6NM11 1700 aa23.09■■□□□ 1.29
COL20A1-208ENST00000496810 COL6A1P12109 1028 aa23.09■■□□□ 1.29
COL20A1-208ENST00000496810 SNAP25P60880 206 aa23.09■■□□□ 1.29
COL20A1-208ENST00000496810 ZNF792Q3KQV3 632 aa23.09■■□□□ 1.29
COL20A1-208ENST00000496810 HABP4Q5JVS0 413 aaKnown RBP23.09■■□□□ 1.29
COL20A1-208ENST00000496810 ATP2A1O14983 1001 aa23.08■■□□□ 1.29
COL20A1-208ENST00000496810 EVI5O60447 810 aa23.08■■□□□ 1.29
COL20A1-208ENST00000496810 CAPN2P17655 700 aa23.08■■□□□ 1.29
COL20A1-208ENST00000496810 SLC1A4P43007 532 aa23.08■■□□□ 1.29
COL20A1-208ENST00000496810 STAT2P52630 851 aa23.08■■□□□ 1.29
COL20A1-208ENST00000496810 KCTD2Q14681 263 aa23.08■■□□□ 1.29
COL20A1-208ENST00000496810 CHRDL2Q6WN34 429 aa23.08■■□□□ 1.29
COL20A1-208ENST00000496810 STAG1Q8WVM7 1258 aa23.08■■□□□ 1.29
COL20A1-208ENST00000496810 ZNF536O15090 1300 aa23.08■■□□□ 1.28
COL20A1-208ENST00000496810 ZBED4O75132 1171 aa23.07■■□□□ 1.28
COL20A1-208ENST00000496810 AKNAD1Q5T1N1 836 aa23.07■■□□□ 1.28
COL20A1-208ENST00000496810 RCSD1Q6JBY9 416 aa23.07■■□□□ 1.28
COL20A1-208ENST00000496810 C7orf61Q8IZ16 206 aa23.07■■□□□ 1.28
COL20A1-208ENST00000496810 HOMER2Q9NSB8 354 aa23.07■■□□□ 1.28
COL20A1-208ENST00000496810 COPB2P35606 906 aa23.06■■□□□ 1.28
COL20A1-208ENST00000496810 FGD4Q96M96 766 aa23.06■■□□□ 1.28
COL20A1-208ENST00000496810 TMEM47Q9BQJ4 181 aa23.06■■□□□ 1.28
COL20A1-208ENST00000496810 DNAJC25-GNG10A0A024R161 153 aa23.05■■□□□ 1.28
COL20A1-208ENST00000496810 MFAP1P55081 439 aaKnown RBP23.05■■□□□ 1.28
COL20A1-208ENST00000496810 IKQ13123 557 aaPredicted RBP23.05■■□□□ 1.28
COL20A1-208ENST00000496810 CCDC96Q2M329 555 aa23.05■■□□□ 1.28
COL20A1-208ENST00000496810 TTBK2Q6IQ55 1244 aa23.05■■□□□ 1.28
COL20A1-208ENST00000496810 MFSD6Q6ZSS7 791 aa23.05■■□□□ 1.28
COL20A1-208ENST00000496810 LENG1Q96BZ8 264 aaPredicted RBP23.05■■□□□ 1.28
COL20A1-208ENST00000496810 AGBL1Q96MI9 1066 aa23.05■■□□□ 1.28
COL20A1-208ENST00000496810 ZKSCAN3Q9BRR0 538 aa23.05■■□□□ 1.28
COL20A1-208ENST00000496810 SLC5A4Q9NY91 659 aa23.05■■□□□ 1.28
COL20A1-208ENST00000496810 SEPT4O43236 478 aa23.04■■□□□ 1.28
COL20A1-208ENST00000496810 LRRC26Q2I0M4 334 aa23.04■■□□□ 1.28
COL20A1-208ENST00000496810 TINF2Q9BSI4 451 aa23.04■■□□□ 1.28
COL20A1-208ENST00000496810 PRR12Q9ULL5 1215 aa23.04■■□□□ 1.28
COL20A1-208ENST00000496810 ZMYND8Q9ULU4 1186 aaPredicted RBP23.04■■□□□ 1.28
COL20A1-208ENST00000496810 CTDP1Q9Y5B0 961 aaPredicted RBP23.04■■□□□ 1.28
COL20A1-208ENST00000496810 NR2E3Q9Y5X4 410 aa23.04■■□□□ 1.28
COL20A1-208ENST00000496810 FRMPD2Q68DX3 1309 aaPredicted RBP23.04■■□□□ 1.28
COL20A1-208ENST00000496810 LAMA2P24043 3122 aaKnown RBP23.04■■□□□ 1.28
COL20A1-208ENST00000496810 HIP1O00291 1037 aa23.03■■□□□ 1.28
COL20A1-208ENST00000496810 TOP1P11387 765 aaKnown RBP23.03■■□□□ 1.28
COL20A1-208ENST00000496810 SLC16A2P36021 539 aa23.03■■□□□ 1.28
COL20A1-208ENST00000496810 OAZ1P54368 228 aa23.03■■□□□ 1.28
COL20A1-208ENST00000496810 PPP4R3BQ5MIZ7 849 aa23.03■■□□□ 1.28
COL20A1-208ENST00000496810 GJC2Q5T442 439 aaPredicted RBP23.03■■□□□ 1.28
COL20A1-208ENST00000496810 CCDC174Q6PII3 467 aa23.03■■□□□ 1.28
COL20A1-208ENST00000496810 FAM160B2Q86V87 743 aa23.03■■□□□ 1.28
COL20A1-208ENST00000496810 DSCC1Q9BVC3 393 aa23.03■■□□□ 1.28
COL20A1-208ENST00000496810 PRO3102Q9H379 93 aa23.03■■□□□ 1.28
COL20A1-208ENST00000496810 TCP11L1Q9NUJ3 509 aa23.03■■□□□ 1.28
COL20A1-208ENST00000496810 RBM27Q9P2N5 1060 aaKnown RBP23.03■■□□□ 1.28
COL20A1-208ENST00000496810 MSCO60682 206 aa23.02■■□□□ 1.28
COL20A1-208ENST00000496810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.02■■□□□ 1.28
COL20A1-208ENST00000496810 SKAP1Q86WV1 359 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms