RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 ZSWIM6Q9HCJ5 1215 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 TCP11L1Q9NUJ3 509 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 SLC5A4Q9NY91 659 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 FEM1BQ9UK73 627 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 CCDC69A6NI79 296 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 ADCY3O60266 1144 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 ZBED4O75132 1171 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 NDUFB10O96000 172 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 TOP1P11387 765 aaKnown RBP9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 BMP3P12645 472 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 RPS6KB1P23443 525 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 ANP32AP39687 249 aaKnown RBP9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 RGS2P41220 211 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 FLT3LGP49771 235 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 STAT2P52630 851 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 IRF5Q13568 498 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 GPR142Q7Z601 462 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 FAM160B2Q86V87 743 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 SIAH1Q8IUQ4 282 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 PRPF38AQ8NAV1 312 aaKnown RBP9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 TM6SF1Q9BZW5 370 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 RBPJLQ9UBG7 517 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 PPP1R9AQ9ULJ8 1098 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 NEDD4P46934 1319 aa9.55□□□□□ -0.88
SMARCD3-215ENST00000496530 STRNO43815 780 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 NMT2O60551 498 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 EXOSC10Q01780 885 aaKnown RBP9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 STK3Q13188 491 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 WTAPQ15007 396 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 CCDC96Q2M329 555 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 RCSD1Q6JBY9 416 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 NCAPG2Q86XI2 1143 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 DGKHQ86XP1 1220 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 TMTC2Q8N394 836 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 SHCBP1Q8NEM2 672 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 DCAF4Q8WV16 495 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 KIFC2Q96AC6 838 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 ATG4CQ96DT6 458 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 GMCL1Q96IK5 515 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 ZSCAN10Q96SZ4 725 aaPredicted RBP9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 KIF2CQ99661 725 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 SPATC1LQ9H0A9 340 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 MROH8Q9H579 483 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 KAT14Q9H8E8 782 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 TXNRD2Q9NNW7 524 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 ZSWIM8A7E2V4 1837 aa9.54□□□□□ -0.88
SMARCD3-215ENST00000496530 SLC15A5A6NIM6 579 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 TMEM232C9JQI7 657 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 VWA5AO00534 786 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 HSP90AA1P07900 732 aaKnown RBP9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 CAPN2P17655 700 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 CTGFP29279 349 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 STAT3P40763 770 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 AK2P54819 239 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 APOBRQ0VD83 1088 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 BECN1Q14457 450 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 ANKRD1Q15327 319 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 Q3C1V9 767 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 IFIT1BQ5T764 474 aaKnown RBP9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 DPP9Q86TI2 863 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 RAB11FIP4Q86YS3 637 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 NKX2-3Q8TAU0 364 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 NUP133Q8WUM0 1156 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 BRF1Q92994 677 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 ARMC5Q96C12 935 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 APBA2Q99767 749 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 IL17RBQ9NRM6 502 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 FOXD4L1Q9NU39 408 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 BTBD7Q9P203 1132 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 PNMA2Q9UL42 364 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 GABRQQ9UN88 632 aa9.53□□□□□ -0.88
SMARCD3-215ENST00000496530 PCNTO95613 3336 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 A0A0G2JMZ2 1700 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 PLA2G6O60733 806 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 CNMDO75829 334 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 HMGCRP04035 888 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 FCER1AP12319 257 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 XRCC5P13010 732 aaKnown RBP9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 ERCC3P19447 782 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 CYP2B6P20813 491 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 SLC4A3P48751 1232 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 OAZ1P54368 228 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 CCT2P78371 535 aaKnown RBP9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 MAP2K5Q13163 448 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 COL9A3Q14050 684 aaPredicted RBP9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 KCTD2Q14681 263 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 KIAA1755Q5JYT7 1200 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 GPATCH4Q5T3I0 446 aaKnown RBP9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 CATIPQ7Z7H3 387 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 HSCBQ8IWL3 235 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 CCDC144CPQ8IYA2 1237 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 MB21D2Q8IYB1 491 aaPredicted RBP9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 IGDCC4Q8TDY8 1250 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 SH3TC2Q8TF17 1288 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 ZNF333Q96JL9 665 aa9.52□□□□□ -0.89
SMARCD3-215ENST00000496530 TMEM87BQ96K49 555 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms