RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 RASGRP2Q7LDG7 609 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 CCAR1Q8IX12 1150 aaKnown RBP11.29□□□□□ -0.6
PRPF3-207ENST00000496202 HOMEZQ8IX15 550 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 ZNF654Q8IZM8 581 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 PRPF38AQ8NAV1 312 aaKnown RBP11.29□□□□□ -0.6
PRPF3-207ENST00000496202 CTCFLQ8NI51 663 aaPredicted RBP11.29□□□□□ -0.6
PRPF3-207ENST00000496202 NUP133Q8WUM0 1156 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 ATG4CQ96DT6 458 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 ERO1AQ96HE7 468 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
PRPF3-207ENST00000496202 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
PRPF3-207ENST00000496202 RABGAP1Q9Y3P9 1069 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 SLC12A7Q9Y666 1083 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 COL11A1P12107 1806 aaPredicted RBP11.29□□□□□ -0.6
PRPF3-207ENST00000496202 MYH6P13533 1939 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 ZBED4O75132 1171 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 CALM1P0DP23 149 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 CALM2P0DP24 149 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 CALM3P0DP25 149 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 KIF5BP33176 963 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 CCNA1P78396 465 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 COL9A3Q14050 684 aaPredicted RBP11.28□□□□□ -0.6
PRPF3-207ENST00000496202 PLS1Q14651 629 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 ARHGEF6Q15052 776 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 SYDE2Q5VT97 1194 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 C17orf99Q6UX52 265 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 LBX2Q6XYB7 198 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 Q6ZUG5 572 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 GPRC5AQ8NFJ5 357 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 ZNF296Q8WUU4 475 aaPredicted RBP11.28□□□□□ -0.6
PRPF3-207ENST00000496202 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 PDRG1Q9NUG6 133 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 MORF4L1Q9UBU8 362 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 A0A0G2JMZ2 1700 aa11.28□□□□□ -0.6
PRPF3-207ENST00000496202 MGAMO43451 1857 aa11.27□□□□□ -0.6
PRPF3-207ENST00000496202 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 VWA5AO00534 786 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 ZBTB43O43298 467 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 PLA2G6O60733 806 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 GOLGA8HP0CJ92 632 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 SNHG28P0DPA3 235 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 FDX1P10109 184 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 BCRP11274 1271 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 SLC16A2P36021 539 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 ERVK-9P63128 1117 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 ERVK-24P63145 666 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 GRM4Q14833 912 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 WDR78Q5VTH9 848 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 MICU3Q86XE3 530 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 BRF1Q92994 677 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 MYL10Q9BUA6 226 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 BACH2Q9BYV9 841 aa11.27□□□□□ -0.61
PRPF3-207ENST00000496202 GOLGA8AA7E2F4 631 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 GOLGA8BA8MQT2 603 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 KLRF2D3W0D1 207 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 GNAQP50148 359 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 FCGRTP55899 365 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 LACTBP83111 547 aaPredicted RBP11.26□□□□□ -0.61
PRPF3-207ENST00000496202 APOBRQ0VD83 1088 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 TTBK2Q6IQ55 1244 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 APOA5Q6Q788 366 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 BTNL9Q6UXG8 535 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 CCDC144CPQ8IYA2 1237 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 CD99L2Q8TCZ2 262 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 MAP3K14Q99558 947 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 TXNRD2Q9NNW7 524 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 RBPJLQ9UBG7 517 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 PRR12Q9ULL5 1215 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 DOCK3Q8IZD9 2030 aa11.26□□□□□ -0.61
PRPF3-207ENST00000496202 TNPO2O14787 897 aaKnown RBP11.25□□□□□ -0.61
PRPF3-207ENST00000496202 FMNL1O95466 1100 aaPredicted RBP11.25□□□□□ -0.61
PRPF3-207ENST00000496202 RXRAP19793 462 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 MAPK4P31152 587 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 COPB2P35606 906 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 PSMC4P43686 418 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 SLC4A3P48751 1232 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 RBM25P49756 843 aaKnown RBP11.25□□□□□ -0.61
PRPF3-207ENST00000496202 NEK4P51957 841 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 TROAPQ12815 778 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 ANKRD1Q15327 319 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 RTN1Q16799 776 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 CCDC174Q6PII3 467 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 CPXCR1Q8N123 301 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 IL17RAQ96F46 866 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 TEX13BQ9BXU2 312 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 UBA5Q9GZZ9 404 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 SPATC1LQ9H0A9 340 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 SLC38A10Q9HBR0 1119 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 PRDM10Q9NQV6 1147 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 BTBD7Q9P203 1132 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 MAD2L2Q9UI95 211 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 ADAMTS5Q9UNA0 930 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 IVNS1ABPQ9Y6Y0 642 aa11.25□□□□□ -0.61
PRPF3-207ENST00000496202 ZSWIM8A7E2V4 1837 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 PALM3A6NDB9 673 aaPredicted RBP11.24□□□□□ -0.61
PRPF3-207ENST00000496202 PEX10O60683 326 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 CNMDO75829 334 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms