RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ZNF543Q08ER8 600 aa14.12□□□□□ -0.15
CSNK1E-213ENST00000495232 SYNE3Q6ZMZ3 975 aa14.12□□□□□ -0.15
CSNK1E-213ENST00000495232 RASGRP2Q7LDG7 609 aa14.12□□□□□ -0.15
CSNK1E-213ENST00000495232 NCAPG2Q86XI2 1143 aa14.12□□□□□ -0.15
CSNK1E-213ENST00000495232 LRRC2Q9BYS8 371 aa14.12□□□□□ -0.15
CSNK1E-213ENST00000495232 IVNS1ABPQ9Y6Y0 642 aa14.12□□□□□ -0.15
CSNK1E-213ENST00000495232 WDR19Q8NEZ3 1342 aa14.12□□□□□ -0.15
CSNK1E-213ENST00000495232 SH2B2O14492 632 aaPredicted RBP14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 SLC25A27O95847 323 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 GOLGA8HP0CJ92 632 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 SNHG28P0DPA3 235 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 CASTP20810 708 aaKnown RBP14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 COPB2P35606 906 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 SLC16A2P36021 539 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 STAT3P40763 770 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 LIFRP42702 1097 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 SLC4A3P48751 1232 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 TMEM132BQ14DG7 1078 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 SYDE2Q5VT97 1194 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 POTEEQ6S8J3 1075 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 CPXCR1Q8N123 301 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 NUP133Q8WUM0 1156 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 MOV10L1Q9BXT6 1211 aaKnown RBP14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 TEX13BQ9BXU2 312 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 MCOLN1Q9GZU1 580 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 PORCNQ9H237 461 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 LY9Q9HBG7 655 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 SLC38A10Q9HBR0 1119 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 PRR12Q9ULL5 1215 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 SLC12A7Q9Y666 1083 aa14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 COL11A1P12107 1806 aaPredicted RBP14.11□□□□□ -0.15
CSNK1E-213ENST00000495232 A0A0G2JMZ2 1700 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 DHX16O60231 1041 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 CALM1P0DP23 149 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 CALM2P0DP24 149 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 CALM3P0DP25 149 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 CTGFP29279 349 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 OAZ1P54368 228 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 C8orf34Q49A92 452 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 SNRNP48Q6IEG0 339 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 TTBK2Q6IQ55 1244 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 FBXO46Q6PJ61 603 aaPredicted RBP14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 BTNL9Q6UXG8 535 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 PLEKHH3Q7Z736 793 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 ZNF654Q8IZM8 581 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 TNS4Q8IZW8 715 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 SHCBP1Q8NEM2 672 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 CTCFLQ8NI51 663 aaPredicted RBP14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 RAET1EQ8TD07 263 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 MROH8Q9H579 483 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 SRRDQ9UH36 339 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 PTPN22Q9Y2R2 807 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 CYP46A1Q9Y6A2 500 aa14.1□□□□□ -0.15
CSNK1E-213ENST00000495232 ZSWIM8A7E2V4 1837 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 DDAH1O94760 285 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 ERCC3P19447 782 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 RPS6KB1P23443 525 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 KIF5BP33176 963 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 ANAPC15P60006 121 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 CAP1Q01518 475 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 EXOSC10Q01780 885 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 CCDC174Q6PII3 467 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 GPR142Q7Z601 462 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 RIOX2Q8IUF8 465 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 SOCS4Q8WXH5 440 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 TCEANC2Q96MN5 208 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 NUDT12Q9BQG2 462 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 UPF2Q9HAU5 1272 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 RAVER2Q9HCJ3 691 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 GPHNQ9NQX3 736 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 ZNF214Q9UL59 606 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 NAP1L2Q9ULW6 460 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-213ENST00000495232 KLRF2D3W0D1 207 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 ATP2A1O14983 1001 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 STRNO43815 780 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 SEC24BO95487 1268 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 CPA1P15085 419 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 FLT3LGP49771 235 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 PRKCZQ05513 592 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 TROAPQ12815 778 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 GRM4Q14833 912 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 Q6ZUG5 572 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 RUFY3Q7L099 469 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 SGMS1Q86VZ5 419 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 REPS2Q8NFH8 660 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 MAP3K14Q99558 947 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 TM6SF1Q9BZW5 370 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 UBA5Q9GZZ9 404 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 PNMA2Q9UL42 364 aa14.08□□□□□ -0.16
CSNK1E-213ENST00000495232 PALM3A6NDB9 673 aaPredicted RBP14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 FCER1AP12319 257 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 PTPREP23469 700 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 SNAP25P60880 206 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 COL9A3Q14050 684 aaPredicted RBP14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 KCTD2Q14681 263 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 SLC9C1Q4G0N8 1177 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 NBPF11Q86T75 865 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 STAG2Q8N3U4 1231 aa14.07□□□□□ -0.16
CSNK1E-213ENST00000495232 MYL10Q9BUA6 226 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms