RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 PUM3Q15397 648 aaKnown RBP11.13□□□□□ -0.63
GARNL3-219ENST00000495172 PPP1R13LQ8WUF5 828 aa11.13□□□□□ -0.63
GARNL3-219ENST00000495172 AGBL1Q96MI9 1066 aa11.13□□□□□ -0.63
GARNL3-219ENST00000495172 FEZ1Q99689 392 aa11.13□□□□□ -0.63
GARNL3-219ENST00000495172 TINF2Q9BSI4 451 aa11.13□□□□□ -0.63
GARNL3-219ENST00000495172 SPATC1LQ9H0A9 340 aa11.13□□□□□ -0.63
GARNL3-219ENST00000495172 RPAP3Q9H6T3 665 aaPredicted RBP11.13□□□□□ -0.63
GARNL3-219ENST00000495172 IFT57Q9NWB7 429 aa11.13□□□□□ -0.63
GARNL3-219ENST00000495172 GRIN2DO15399 1336 aa11.12□□□□□ -0.63
GARNL3-219ENST00000495172 B4GALT4O60513 344 aa11.12□□□□□ -0.63
GARNL3-219ENST00000495172 GH2P01242 217 aa11.12□□□□□ -0.63
GARNL3-219ENST00000495172 AVPR2P30518 371 aa11.12□□□□□ -0.63
GARNL3-219ENST00000495172 LBX2Q6XYB7 198 aa11.12□□□□□ -0.63
GARNL3-219ENST00000495172 MCM3APO60318 1980 aa11.12□□□□□ -0.63
GARNL3-219ENST00000495172 ASPMQ8IZT6 3477 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 CTAGE5O15320 804 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 STRNO43815 780 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 CYP2C9P11712 490 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 PSMC6P62333 389 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 MECOMQ03112 1051 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 ST3GAL2Q16842 350 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 CXCL17Q6UXB2 119 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 SH3RF3Q8TEJ3 882 aaPredicted RBP11.11□□□□□ -0.63
GARNL3-219ENST00000495172 PRRX2Q99811 253 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 BICC1Q9H694 974 aaKnown RBP11.11□□□□□ -0.63
GARNL3-219ENST00000495172 ZHX1Q9UKY1 873 aaPredicted RBP11.11□□□□□ -0.63
GARNL3-219ENST00000495172 ZFYVE26Q68DK2 2539 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 SIP14410 1827 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 GPR179Q6PRD1 2367 aa11.11□□□□□ -0.63
GARNL3-219ENST00000495172 SALL1Q9NSC2 1324 aa11.1□□□□□ -0.63
GARNL3-219ENST00000495172 COL11A1P12107 1806 aaPredicted RBP11.1□□□□□ -0.63
GARNL3-219ENST00000495172 GPR75-ASB3A0A0A6YYF3 556 aa11.1□□□□□ -0.63
GARNL3-219ENST00000495172 ADORA1P30542 326 aa11.1□□□□□ -0.63
GARNL3-219ENST00000495172 GNAI1P63096 354 aa11.1□□□□□ -0.63
GARNL3-219ENST00000495172 DLX2Q07687 328 aaPredicted RBP11.1□□□□□ -0.63
GARNL3-219ENST00000495172 GNASQ5JWF2 1037 aa11.1□□□□□ -0.63
GARNL3-219ENST00000495172 RPUSD2Q8IZ73 545 aaKnown RBP11.1□□□□□ -0.63
GARNL3-219ENST00000495172 ANKRD44Q8N8A2 993 aa11.1□□□□□ -0.63
GARNL3-219ENST00000495172 RUNDC1Q96C34 613 aa11.1□□□□□ -0.63
GARNL3-219ENST00000495172 C12orf42Q96LP6 360 aa11.1□□□□□ -0.63
GARNL3-219ENST00000495172 UPF3BQ9BZI7 483 aaKnown RBP11.1□□□□□ -0.63
GARNL3-219ENST00000495172 SAP30BPQ9UHR5 308 aaKnown RBP11.1□□□□□ -0.63
GARNL3-219ENST00000495172 HERC5Q9UII4 1024 aaKnown RBP11.1□□□□□ -0.63
GARNL3-219ENST00000495172 ATG2AQ2TAZ0 1938 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 ROBO3Q96MS0 1386 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 SNAI1O95863 264 aaPredicted RBP11.09□□□□□ -0.63
GARNL3-219ENST00000495172 NBPF7P0C2Y1 421 aaPredicted RBP11.09□□□□□ -0.63
GARNL3-219ENST00000495172 ZXDAP98168 799 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 ZNF792Q3KQV3 632 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 TCEAL5Q5H9L2 206 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 KIAA1755Q5JYT7 1200 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 MAPKAPK5Q8IW41 473 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 TEX11Q8IYF3 940 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 SLC9A7Q96T83 725 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 C17orf80Q9BSJ5 609 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 C9orf78Q9NZ63 289 aaPredicted RBP11.09□□□□□ -0.63
GARNL3-219ENST00000495172 LMCD1Q9NZU5 365 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 PRKAG3Q9UGI9 489 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 PALD1Q9ULE6 856 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 FAM208BQ5VWN6 2430 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 KIF16BQ96L93 1317 aa11.09□□□□□ -0.63
GARNL3-219ENST00000495172 ARP10275 920 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 FCER1AP12319 257 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 LTBRP36941 435 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 NBL1P41271 181 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 DEFB103AP81534 67 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 RASGRF1Q13972 1273 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 RAB3GAP1Q15042 981 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 FAM117BQ6P1L5 589 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-219ENST00000495172 LPIN2Q92539 896 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 ATG4CQ96DT6 458 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 FAM163AQ96GL9 167 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-219ENST00000495172 TRMT13Q9NUP7 481 aaKnown RBP11.08□□□□□ -0.64
GARNL3-219ENST00000495172 CLDND1Q9NY35 253 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 SLC5A4Q9NY91 659 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 PI4KBQ9UBF8 816 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 FAM184BQ9ULE4 1060 aa11.08□□□□□ -0.64
GARNL3-219ENST00000495172 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 CST5P28325 142 aaPredicted RBP11.07□□□□□ -0.64
GARNL3-219ENST00000495172 ITGA7Q13683 1181 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 TCTN1Q2MV58 587 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 PUS10Q3MIT2 529 aaKnown RBP11.07□□□□□ -0.64
GARNL3-219ENST00000495172 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 KIAA2013Q8IYS2 634 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 SLC43A3Q8NBI5 491 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 SHCBP1Q8NEM2 672 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 ASIC4Q96FT7 647 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 MMP19Q99542 508 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 TANGO6Q9C0B7 1094 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 CNPY2Q9Y2B0 182 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 FRYQ5TBA9 3013 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 ASTN1O14525 1302 aa11.07□□□□□ -0.64
GARNL3-219ENST00000495172 KIF28PB7ZC32 967 aa11.06□□□□□ -0.64
GARNL3-219ENST00000495172 DUSP11O75319 330 aaKnown RBP11.06□□□□□ -0.64
GARNL3-219ENST00000495172 CSPG5O95196 566 aa11.06□□□□□ -0.64
GARNL3-219ENST00000495172 ERVK-21P61565 698 aa11.06□□□□□ -0.64
GARNL3-219ENST00000495172 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-219ENST00000495172 PI16Q6UXB8 463 aa11.06□□□□□ -0.64
GARNL3-219ENST00000495172 PCSK9Q8NBP7 692 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms