RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 RAD51AP2Q09MP3 1159 aa7.49□□□□□ -1.21
VPS50-219ENST00000495039 SKOR2Q2VWA4 1001 aaPredicted RBP7.49□□□□□ -1.21
VPS50-219ENST00000495039 FAM196AQ6ZSG2 479 aa7.49□□□□□ -1.21
VPS50-219ENST00000495039 PRRT2Q7Z6L0 340 aaPredicted RBP7.49□□□□□ -1.21
VPS50-219ENST00000495039 FBXO27Q8NI29 283 aa7.49□□□□□ -1.21
VPS50-219ENST00000495039 FEZF2Q8TBJ5 459 aa7.49□□□□□ -1.21
VPS50-219ENST00000495039 FAM161BQ96MY7 647 aa7.49□□□□□ -1.21
VPS50-219ENST00000495039 GMIPQ9P107 970 aa7.49□□□□□ -1.21
VPS50-219ENST00000495039 WTIPA6NIX2 430 aaPredicted RBP7.48□□□□□ -1.21
VPS50-219ENST00000495039 SIGLEC6O43699 453 aa7.48□□□□□ -1.21
VPS50-219ENST00000495039 LAPTM5Q13571 262 aa7.48□□□□□ -1.21
VPS50-219ENST00000495039 SNW1Q13573 536 aaKnown RBP7.48□□□□□ -1.21
VPS50-219ENST00000495039 CWF19L2Q2TBE0 894 aaKnown RBP7.48□□□□□ -1.21
VPS50-219ENST00000495039 ZPBP2Q6X784 338 aa7.48□□□□□ -1.21
VPS50-219ENST00000495039 FADS2P1A8MWK0 482 aa7.47□□□□□ -1.21
VPS50-219ENST00000495039 MINDY4BA8MYZ0 360 aa7.47□□□□□ -1.21
VPS50-219ENST00000495039 SORBS3O60504 671 aa7.47□□□□□ -1.21
VPS50-219ENST00000495039 VMACQ2NL98 169 aa7.47□□□□□ -1.21
VPS50-219ENST00000495039 HSF5Q4G112 596 aaPredicted RBP7.47□□□□□ -1.21
VPS50-219ENST00000495039 TMC6Q7Z403 805 aa7.47□□□□□ -1.21
VPS50-219ENST00000495039 FAM129CQ86XR2 697 aa7.47□□□□□ -1.21
VPS50-219ENST00000495039 TMEFF1Q8IYR6 380 aa7.47□□□□□ -1.21
VPS50-219ENST00000495039 KLHL14Q9P2G3 628 aa7.47□□□□□ -1.21
VPS50-219ENST00000495039 GPR55Q9Y2T6 319 aaPredicted RBP7.47□□□□□ -1.21
VPS50-219ENST00000495039 PCDHB14Q9Y5E9 798 aa7.47□□□□□ -1.21
VPS50-219ENST00000495039 TLR3O15455 904 aaKnown RBP7.46□□□□□ -1.22
VPS50-219ENST00000495039 GARTP22102 1010 aa7.46□□□□□ -1.22
VPS50-219ENST00000495039 LDHDQ86WU2 507 aa7.46□□□□□ -1.22
VPS50-219ENST00000495039 ZDHHC14Q8IZN3 488 aa7.46□□□□□ -1.22
VPS50-219ENST00000495039 BORCS6Q96GS4 357 aa7.46□□□□□ -1.22
VPS50-219ENST00000495039 LRRC3Q9BY71 257 aa7.46□□□□□ -1.22
VPS50-219ENST00000495039 PRDM14Q9GZV8 571 aa7.46□□□□□ -1.22
VPS50-219ENST00000495039 MRS2Q9HD23 443 aa7.46□□□□□ -1.22
VPS50-219ENST00000495039 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
VPS50-219ENST00000495039 ROBO2Q9HCK4 1378 aa7.46□□□□□ -1.22
VPS50-219ENST00000495039 CLEC3AO75596 197 aa7.45□□□□□ -1.22
VPS50-219ENST00000495039 ITGAEP38570 1179 aa7.45□□□□□ -1.22
VPS50-219ENST00000495039 RAB3GAP1Q15042 981 aa7.45□□□□□ -1.22
VPS50-219ENST00000495039 OVOS1Q6IE37 1185 aa7.45□□□□□ -1.22
VPS50-219ENST00000495039 SND1Q7KZF4 910 aaKnown RBP eCLIP7.45□□□□□ -1.22
VPS50-219ENST00000495039 IGDCC3Q8IVU1 814 aa7.45□□□□□ -1.22
VPS50-219ENST00000495039 LINC01356Q8N9X3 169 aa7.45□□□□□ -1.22
VPS50-219ENST00000495039 TEPSINQ96N21 525 aa7.45□□□□□ -1.22
VPS50-219ENST00000495039 CHST7Q9NS84 486 aa7.45□□□□□ -1.22
VPS50-219ENST00000495039 VTI1BQ9UEU0 232 aa7.45□□□□□ -1.22
VPS50-219ENST00000495039 ZC3H12DA2A288 527 aaKnown RBP7.44□□□□□ -1.22
VPS50-219ENST00000495039 ATE1O95260 518 aa7.44□□□□□ -1.22
VPS50-219ENST00000495039 PRKCAP17252 672 aa7.44□□□□□ -1.22
VPS50-219ENST00000495039 POLR2BP30876 1174 aaKnown RBP7.44□□□□□ -1.22
VPS50-219ENST00000495039 CCNFP41002 786 aa7.44□□□□□ -1.22
VPS50-219ENST00000495039 KIR3DS1Q14943 382 aa7.44□□□□□ -1.22
VPS50-219ENST00000495039 CDCP2Q5VXM1 449 aa7.44□□□□□ -1.22
VPS50-219ENST00000495039 SLCO6A1Q86UG4 719 aa7.44□□□□□ -1.22
VPS50-219ENST00000495039 PWWP2AQ96N64 755 aa7.44□□□□□ -1.22
VPS50-219ENST00000495039 TRAIPQ9BWF2 469 aa7.44□□□□□ -1.22
VPS50-219ENST00000495039 BRMS1Q9HCU9 246 aa7.44□□□□□ -1.22
VPS50-219ENST00000495039 ERVK13-1Q9NX77 482 aa7.44□□□□□ -1.22
VPS50-219ENST00000495039 ADAMTS20P59510 1910 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 A0A1W2PQ45 241 aaPredicted RBP7.43□□□□□ -1.22
VPS50-219ENST00000495039 A0A1W2PQY0 241 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 NUDT19A8MXV4 375 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 ADRB1P08588 477 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 BMP8BP34820 402 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 KRTAP10-2P60368 255 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 CYP4F8P98187 520 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 SYT8Q8NBV8 401 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 CDADC1Q9BWV3 514 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 CNNM2Q9H8M5 875 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 TNFRSF12AQ9NP84 129 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 KCNQ5Q9NR82 932 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 KBTBD4Q9NVX7 518 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 PCDHA5Q9Y5H7 936 aa7.43□□□□□ -1.22
VPS50-219ENST00000495039 ZNF205O95201 554 aa7.42□□□□□ -1.22
VPS50-219ENST00000495039 NFKB2Q00653 900 aa7.42□□□□□ -1.22
VPS50-219ENST00000495039 FRMD5Q7Z6J6 570 aa7.42□□□□□ -1.22
VPS50-219ENST00000495039 NUP43Q8NFH3 380 aa7.42□□□□□ -1.22
VPS50-219ENST00000495039 ZNF512BQ96KM6 892 aaPredicted RBP7.42□□□□□ -1.22
VPS50-219ENST00000495039 ADAM7Q9H2U9 754 aa7.42□□□□□ -1.22
VPS50-219ENST00000495039 ACSL6Q9UKU0 697 aa7.42□□□□□ -1.22
VPS50-219ENST00000495039 SUPT16HQ9Y5B9 1047 aaKnown RBP7.42□□□□□ -1.22
VPS50-219ENST00000495039 MEIS1O00470 390 aa7.41□□□□□ -1.22
VPS50-219ENST00000495039 BUB1BO60566 1050 aaPredicted RBP7.41□□□□□ -1.22
VPS50-219ENST00000495039 CBX2Q14781 532 aaPredicted RBP7.41□□□□□ -1.22
VPS50-219ENST00000495039 FBXL19Q6PCT2 694 aa7.41□□□□□ -1.22
VPS50-219ENST00000495039 NLRC3Q7RTR2 1065 aa7.41□□□□□ -1.22
VPS50-219ENST00000495039 FBXO33Q7Z6M2 555 aa7.41□□□□□ -1.22
VPS50-219ENST00000495039 AEBP1Q8IUX7 1158 aa7.41□□□□□ -1.22
VPS50-219ENST00000495039 EAF1Q96JC9 268 aaPredicted RBP7.41□□□□□ -1.22
VPS50-219ENST00000495039 MKRN2Q9H000 416 aaKnown RBP7.41□□□□□ -1.22
VPS50-219ENST00000495039 MINPP1Q9UNW1 487 aa7.41□□□□□ -1.22
VPS50-219ENST00000495039 PCDHB12Q9Y5F1 795 aa7.41□□□□□ -1.22
VPS50-219ENST00000495039 RPTNQ6XPR3 784 aa7.4□□□□□ -1.22
VPS50-219ENST00000495039 ERMP1Q7Z2K6 904 aa7.4□□□□□ -1.22
VPS50-219ENST00000495039 NLGN1Q8N2Q7 840 aa7.4□□□□□ -1.22
VPS50-219ENST00000495039 ATG4CQ96DT6 458 aa7.4□□□□□ -1.22
VPS50-219ENST00000495039 EHMT1Q9H9B1 1298 aa7.4□□□□□ -1.22
VPS50-219ENST00000495039 GFOD1Q9NXC2 390 aa7.4□□□□□ -1.22
VPS50-219ENST00000495039 EIF4A3P38919 411 aaKnown RBP7.39□□□□□ -1.23
VPS50-219ENST00000495039 NCKAP1LP55160 1127 aa7.39□□□□□ -1.23
VPS50-219ENST00000495039 CAP1Q01518 475 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms