RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 RIOX2Q8IUF8 465 aa18.71■□□□□ 0.59
LIME1-209ENST00000494776 CPXCR1Q8N123 301 aa18.71■□□□□ 0.59
LIME1-209ENST00000494776 TNKSO95271 1327 aa18.71■□□□□ 0.59
LIME1-209ENST00000494776 ERICH2A1L162 156 aa18.7■□□□□ 0.58
LIME1-209ENST00000494776 FDX1P10109 184 aa18.7■□□□□ 0.58
LIME1-209ENST00000494776 COPB2P35606 906 aa18.7■□□□□ 0.58
LIME1-209ENST00000494776 MAP2K5Q13163 448 aa18.7■□□□□ 0.58
LIME1-209ENST00000494776 IFIT1BQ5T764 474 aaKnown RBP18.7■□□□□ 0.58
LIME1-209ENST00000494776 SNRNP48Q6IEG0 339 aaKnown RBP18.7■□□□□ 0.58
LIME1-209ENST00000494776 RASGRP2Q7LDG7 609 aa18.7■□□□□ 0.58
LIME1-209ENST00000494776 DPP9Q86TI2 863 aa18.7■□□□□ 0.58
LIME1-209ENST00000494776 ENAHQ8N8S7 591 aaPredicted RBP18.7■□□□□ 0.58
LIME1-209ENST00000494776 TEX13BQ9BXU2 312 aa18.7■□□□□ 0.58
LIME1-209ENST00000494776 GPCPD1Q9NPB8 672 aa18.7■□□□□ 0.58
LIME1-209ENST00000494776 FRMPD2Q68DX3 1309 aaPredicted RBP18.7■□□□□ 0.58
LIME1-209ENST00000494776 A0A0G2JMZ2 1700 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 SLC27A2O14975 620 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 PLA2G6O60733 806 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 HMGCRP04035 888 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 INHAP05111 366 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 PDHBP11177 359 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 FCER1AP12319 257 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 XRCC5P13010 732 aaKnown RBP18.69■□□□□ 0.58
LIME1-209ENST00000494776 SART3Q15020 963 aaKnown RBP18.69■□□□□ 0.58
LIME1-209ENST00000494776 RNF20Q5VTR2 975 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 CYB5R4Q7L1T6 521 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 TRMT44Q8IYL2 757 aaKnown RBP18.69■□□□□ 0.58
LIME1-209ENST00000494776 PNMA1Q8ND90 353 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 REPS2Q8NFH8 660 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 APBA2Q99767 749 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 SLC38A10Q9HBR0 1119 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 RAVER2Q9HCJ3 691 aaKnown RBP18.69■□□□□ 0.58
LIME1-209ENST00000494776 ZNF214Q9UL59 606 aaPredicted RBP18.69■□□□□ 0.58
LIME1-209ENST00000494776 TAF6LQ9Y6J9 622 aa18.69■□□□□ 0.58
LIME1-209ENST00000494776 PARP14Q460N5 1801 aa18.68■□□□□ 0.58
LIME1-209ENST00000494776 IFIT3O14879 490 aaKnown RBP18.68■□□□□ 0.58
LIME1-209ENST00000494776 CCL5P13501 91 aa18.68■□□□□ 0.58
LIME1-209ENST00000494776 ZKSCAN1P17029 563 aaPredicted RBP18.68■□□□□ 0.58
LIME1-209ENST00000494776 GRB14Q14449 540 aa18.68■□□□□ 0.58
LIME1-209ENST00000494776 MTFR1Q15390 333 aa18.68■□□□□ 0.58
LIME1-209ENST00000494776 CREB3L3Q68CJ9 461 aa18.68■□□□□ 0.58
LIME1-209ENST00000494776 ANKS1AQ92625 1134 aa18.68■□□□□ 0.58
LIME1-209ENST00000494776 USP6NLQ92738 828 aa18.68■□□□□ 0.58
LIME1-209ENST00000494776 MMP19Q99542 508 aa18.68■□□□□ 0.58
LIME1-209ENST00000494776 RNF208Q9H0X6 261 aa18.68■□□□□ 0.58
LIME1-209ENST00000494776 SLC5A4Q9NY91 659 aa18.68■□□□□ 0.58
LIME1-209ENST00000494776 DOCK3Q8IZD9 2030 aa18.67■□□□□ 0.58
LIME1-209ENST00000494776 ATP2A1O14983 1001 aa18.67■□□□□ 0.58
LIME1-209ENST00000494776 ADORA2AP29274 412 aa18.67■□□□□ 0.58
LIME1-209ENST00000494776 SLC16A2P36021 539 aa18.67■□□□□ 0.58
LIME1-209ENST00000494776 OAZ1P54368 228 aa18.67■□□□□ 0.58
LIME1-209ENST00000494776 KCTD2Q14681 263 aa18.67■□□□□ 0.58
LIME1-209ENST00000494776 NECTIN1Q15223 517 aa18.67■□□□□ 0.58
LIME1-209ENST00000494776 TTBK2Q6IQ55 1244 aa18.67■□□□□ 0.58
LIME1-209ENST00000494776 STOX1Q6ZVD7 989 aa18.67■□□□□ 0.58
LIME1-209ENST00000494776 PRR12Q9ULL5 1215 aa18.67■□□□□ 0.58
LIME1-209ENST00000494776 COL11A1P12107 1806 aaPredicted RBP18.66■□□□□ 0.58
LIME1-209ENST00000494776 POTEFA5A3E0 1075 aa18.66■□□□□ 0.58
LIME1-209ENST00000494776 SNAP25P60880 206 aa18.66■□□□□ 0.58
LIME1-209ENST00000494776 ZNF543Q08ER8 600 aa18.66■□□□□ 0.58
LIME1-209ENST00000494776 CCL14Q16627 93 aa18.66■□□□□ 0.58
LIME1-209ENST00000494776 GPATCH4Q5T3I0 446 aaKnown RBP18.66■□□□□ 0.58
LIME1-209ENST00000494776 SYDE2Q5VT97 1194 aa18.66■□□□□ 0.58
LIME1-209ENST00000494776 CCDC174Q6PII3 467 aa18.66■□□□□ 0.58
LIME1-209ENST00000494776 CHST3Q7LGC8 479 aa18.66■□□□□ 0.58
LIME1-209ENST00000494776 ABRAQ8N0Z2 381 aa18.66■□□□□ 0.58
LIME1-209ENST00000494776 TRIB2Q92519 343 aa18.66■□□□□ 0.58
LIME1-209ENST00000494776 HTTP42858 3142 aa18.66■□□□□ 0.58
LIME1-209ENST00000494776 GOLGA8HP0CJ92 632 aa18.65■□□□□ 0.58
LIME1-209ENST00000494776 SNHG28P0DPA3 235 aa18.65■□□□□ 0.58
LIME1-209ENST00000494776 WTAPQ15007 396 aa18.65■□□□□ 0.58
LIME1-209ENST00000494776 TMEM67Q5HYA8 995 aa18.65■□□□□ 0.58
LIME1-209ENST00000494776 MFSD14CQ5VZR4 134 aa18.65■□□□□ 0.58
LIME1-209ENST00000494776 BTNL9Q6UXG8 535 aa18.65■□□□□ 0.58
LIME1-209ENST00000494776 UNC93B1Q9H1C4 597 aa18.65■□□□□ 0.58
LIME1-209ENST00000494776 HOMER2Q9NSB8 354 aa18.65■□□□□ 0.58
LIME1-209ENST00000494776 RIPK3Q9Y572 518 aa18.65■□□□□ 0.58
LIME1-209ENST00000494776 PLXNB2O15031 1838 aa18.65■□□□□ 0.58
LIME1-209ENST00000494776 REC8O95072 547 aa18.64■□□□□ 0.57
LIME1-209ENST00000494776 HOXC6P09630 235 aa18.64■□□□□ 0.57
LIME1-209ENST00000494776 PARP1P09874 1014 aaKnown RBP18.64■□□□□ 0.57
LIME1-209ENST00000494776 TRIM32Q13049 653 aa18.64■□□□□ 0.57
LIME1-209ENST00000494776 SEC23AQ15436 765 aa18.64■□□□□ 0.57
LIME1-209ENST00000494776 MB21D2Q8IYB1 491 aaPredicted RBP18.64■□□□□ 0.57
LIME1-209ENST00000494776 NPLOC4Q8TAT6 608 aa18.64■□□□□ 0.57
LIME1-209ENST00000494776 DDX11Q96FC9 970 aa18.64■□□□□ 0.57
LIME1-209ENST00000494776 AGBL1Q96MI9 1066 aa18.64■□□□□ 0.57
LIME1-209ENST00000494776 HMX1Q9NP08 348 aaPredicted RBP18.64■□□□□ 0.57
LIME1-209ENST00000494776 FBXO40Q9UH90 709 aa18.64■□□□□ 0.57
LIME1-209ENST00000494776 COBLO75128 1261 aa18.63■□□□□ 0.57
LIME1-209ENST00000494776 ALAS1P13196 640 aa18.63■□□□□ 0.57
LIME1-209ENST00000494776 PRKAR2AP13861 404 aaKnown RBP18.63■□□□□ 0.57
LIME1-209ENST00000494776 EN2P19622 333 aaPredicted RBP18.63■□□□□ 0.57
LIME1-209ENST00000494776 MCM5P33992 734 aa18.63■□□□□ 0.57
LIME1-209ENST00000494776 ASPRV1Q53RT3 343 aa18.63■□□□□ 0.57
LIME1-209ENST00000494776 CHST13Q8NET6 341 aa18.63■□□□□ 0.57
LIME1-209ENST00000494776 CCPG1Q9ULG6 757 aa18.63■□□□□ 0.57
LIME1-209ENST00000494776 RPTORQ8N122 1335 aa18.63■□□□□ 0.57
LIME1-209ENST00000494776 PRC1O43663 620 aa18.62■□□□□ 0.57
LIME1-209ENST00000494776 DHX16O60231 1041 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms