RNA–Protein interactions for RNA: ENST00000494645.1

SEC23B-208, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 2

Gene SEC23B, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-208ENST00000494645 SLC5A4Q9NY91 659 aa8.11□□□□□ -1.11
SEC23B-208ENST00000494645 USP17L12C9JPN9 530 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 USP17L21D6R901 530 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 PGK1P00558 417 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 ADD2P35612 726 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 TLE2Q04725 743 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 FAM109BQ6ICB4 259 aaPredicted RBP8.1□□□□□ -1.11
SEC23B-208ENST00000494645 TMED8Q6PL24 325 aaPredicted RBP8.1□□□□□ -1.11
SEC23B-208ENST00000494645 SIRT2Q8IXJ6 389 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 HS6ST3Q8IZP7 471 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 NUP88Q99567 741 aaPredicted RBP8.1□□□□□ -1.11
SEC23B-208ENST00000494645 CDX2Q99626 313 aaPredicted RBP8.1□□□□□ -1.11
SEC23B-208ENST00000494645 SH2D4AQ9H788 454 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 XPNPEP3Q9NQH7 507 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 PDLIM7Q9NR12 457 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 SWAP70Q9UH65 585 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 TMX2Q9Y320 296 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 SLC4A4Q9Y6R1 1079 aa8.1□□□□□ -1.11
SEC23B-208ENST00000494645 WDR46O15213 610 aaKnown RBP8.09□□□□□ -1.11
SEC23B-208ENST00000494645 PQBP1O60828 265 aaKnown RBP8.09□□□□□ -1.11
SEC23B-208ENST00000494645 RARBP10826 455 aa8.09□□□□□ -1.11
SEC23B-208ENST00000494645 ITGB8P26012 769 aa8.09□□□□□ -1.11
SEC23B-208ENST00000494645 FAM83BQ5T0W9 1011 aa8.09□□□□□ -1.11
SEC23B-208ENST00000494645 C12orf60Q5U649 245 aa8.09□□□□□ -1.11
SEC23B-208ENST00000494645 AMOTL1Q8IY63 956 aa8.09□□□□□ -1.11
SEC23B-208ENST00000494645 ABRAQ8N0Z2 381 aa8.09□□□□□ -1.11
SEC23B-208ENST00000494645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.09□□□□□ -1.11
SEC23B-208ENST00000494645 MYLIPQ8WY64 445 aa8.09□□□□□ -1.11
SEC23B-208ENST00000494645 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.09□□□□□ -1.11
SEC23B-208ENST00000494645 SEMA6BQ9H3T3 888 aa8.09□□□□□ -1.11
SEC23B-208ENST00000494645 ATP8A2Q9NTI2 1148 aa8.09□□□□□ -1.11
SEC23B-208ENST00000494645 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
SEC23B-208ENST00000494645 NAV1Q8NEY1 1877 aa8.09□□□□□ -1.12
SEC23B-208ENST00000494645 UNC80Q8N2C7 3258 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 A0A1W2PQ45 241 aaPredicted RBP8.08□□□□□ -1.12
SEC23B-208ENST00000494645 A0A1W2PQY0 241 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 VWA5AO00534 786 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 SMARCA5O60264 1052 aaPredicted RBP8.08□□□□□ -1.12
SEC23B-208ENST00000494645 HMMRO75330 724 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 SLC25A27O95847 323 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 STAT3P40763 770 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 EPHB4P54760 987 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 KCTD2Q14681 263 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 SNX17Q15036 470 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 CTR9Q6PD62 1173 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 C16orf86Q6ZW13 317 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 RIOX2Q8IUF8 465 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 MAFAQ8NHW3 353 aaPredicted RBP8.08□□□□□ -1.12
SEC23B-208ENST00000494645 CHMP4CQ96CF2 233 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 DDRGK1Q96HY6 314 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 RNPC3Q96LT9 517 aaKnown RBP8.08□□□□□ -1.12
SEC23B-208ENST00000494645 CCDC17Q96LX7 622 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 HAUS7Q99871 368 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 TINF2Q9BSI4 451 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 PUS7LQ9H0K6 701 aaKnown RBP8.08□□□□□ -1.12
SEC23B-208ENST00000494645 TTYH1Q9H313 450 aaPredicted RBP8.08□□□□□ -1.12
SEC23B-208ENST00000494645 KANSL2Q9H9L4 492 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 GOPCQ9HD26 462 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 PPP1R9AQ9ULJ8 1098 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 PHF24Q9UPV7 400 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 FRMPD3Q5JV73 1810 aa8.08□□□□□ -1.12
SEC23B-208ENST00000494645 MINDY4BA8MYZ0 360 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 RAB11FIP3O75154 756 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 CLTBP09497 229 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 ZNF865P0CJ78 1059 aaPredicted RBP8.07□□□□□ -1.12
SEC23B-208ENST00000494645 RAG1P15918 1043 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 ATP5JP18859 108 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 ZNF792Q3KQV3 632 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 SNRNP48Q6IEG0 339 aaKnown RBP8.07□□□□□ -1.12
SEC23B-208ENST00000494645 RNF180Q86T96 592 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 RPAP2Q8IXW5 612 aaPredicted RBP8.07□□□□□ -1.12
SEC23B-208ENST00000494645 VTI1AQ96AJ9 217 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.07□□□□□ -1.12
SEC23B-208ENST00000494645 ZBTB40Q9NUA8 1239 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 TMEM39AQ9NV64 488 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 ZHX1Q9UKY1 873 aaPredicted RBP8.07□□□□□ -1.12
SEC23B-208ENST00000494645 ADAMTS5Q9UNA0 930 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 CNPY2Q9Y2B0 182 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 TACC3Q9Y6A5 838 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 CUL9Q8IWT3 2517 aa8.07□□□□□ -1.12
SEC23B-208ENST00000494645 MYADML2A6NDP7 307 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 MS4A1P11836 297 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 AKR1A1P14550 325 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 FOSL2P15408 326 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 SMAD3P84022 425 aaKnown RBP8.06□□□□□ -1.12
SEC23B-208ENST00000494645 UBE3CQ15386 1083 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 TSHZ3Q63HK5 1081 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 CPXCR1Q8N123 301 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 REPS2Q8NFH8 660 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 DDX11Q96FC9 970 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 SLF1Q9BQI6 1058 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 MKNK2Q9HBH9 465 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 CLIP2Q9UDT6 1046 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 NRBP1Q9UHY1 535 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 ZNF214Q9UL59 606 aaPredicted RBP8.06□□□□□ -1.12
SEC23B-208ENST00000494645 ISY1Q9ULR0 285 aaKnown RBP8.06□□□□□ -1.12
SEC23B-208ENST00000494645 RIPK3Q9Y572 518 aa8.06□□□□□ -1.12
SEC23B-208ENST00000494645 CTDP1Q9Y5B0 961 aaPredicted RBP8.06□□□□□ -1.12
SEC23B-208ENST00000494645 ZBED9Q6R2W3 1325 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms