RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-212	ENST00000494248	BBS9	Q3SYG4	887 aa		4.12	□□□□□ -1.75
PTPN12-212	ENST00000494248	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-212	ENST00000494248	ZNF575	Q86XF7	245 aa		4.12	□□□□□ -1.75
PTPN12-212	ENST00000494248	RETREG2	Q8NC44	543 aa		4.12	□□□□□ -1.75
PTPN12-212	ENST00000494248	TNFRSF12A	Q9NP84	129 aa		4.12	□□□□□ -1.75
PTPN12-212	ENST00000494248	ADAM30	Q9UKF2	790 aa		4.12	□□□□□ -1.75
PTPN12-212	ENST00000494248	HCFC2	Q9Y5Z7	792 aa		4.12	□□□□□ -1.75
PTPN12-212	ENST00000494248	SH3D21	A4FU49	640 aa		4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	FKTN	O75072	461 aa		4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	CLEC16A	Q2KHT3	1053 aa		4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	TXNDC2	Q86VQ3	553 aa		4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	TCTN2	Q96GX1	697 aa		4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	LOXL4	Q96JB6	756 aa		4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	SAMD11	Q96NU1	681 aa		4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	SRCIN1	Q9C0H9	1055 aa		4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	PCED1A	Q9H1Q7	454 aa		4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	TCFL5	Q9UL49	500 aa		4.11	□□□□□ -1.75
PTPN12-212	ENST00000494248	PRKCA	P17252	672 aa		4.1	□□□□□ -1.75
PTPN12-212	ENST00000494248	FOXO4	P98177	505 aa		4.1	□□□□□ -1.75
PTPN12-212	ENST00000494248	SV2B	Q7L1I2	683 aa		4.1	□□□□□ -1.75
PTPN12-212	ENST00000494248	NLGN1	Q8N2Q7	840 aa		4.1	□□□□□ -1.75
PTPN12-212	ENST00000494248	TTC9B	Q8N6N2	239 aa		4.1	□□□□□ -1.75
PTPN12-212	ENST00000494248	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-212	ENST00000494248	ING1	Q9UK53	422 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-212	ENST00000494248	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-212	ENST00000494248	KLF10	Q13118	480 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	NMI	Q13287	307 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	LRCH2	Q5VUJ6	765 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	GALNT18	Q6P9A2	607 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	TMC3	Q7Z5M5	1100 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	SLCO6A1	Q86UG4	719 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	FAM13C	Q8NE31	585 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	ZNF747	Q9BV97	191 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	KRTAP4-4	Q9BYR3	166 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	ST6GALNAC2	Q9UJ37	374 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	MINPP1	Q9UNW1	487 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	PMF1-BGLAP	U3KQ54	211 aa		4.09	□□□□□ -1.75
PTPN12-212	ENST00000494248	USP17L7	P0C7H9	530 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	MAPKAPK2	P49137	400 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	CYP4F8	P98187	520 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	PDE4B	Q07343	736 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	LAPTM5	Q13571	262 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	CARF	Q8N187	725 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	DAGLB	Q8NCG7	672 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	LINC00116	Q8NCU8	138 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	FBF1	Q8TES7	1133 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	ASPN	Q9BXN1	380 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	ACSL6	Q9UKU0	697 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	WWC3	Q9ULE0	1092 aa		4.08	□□□□□ -1.76
PTPN12-212	ENST00000494248	CHURC1-FNTB	B4DL54	471 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	TREH	O43280	583 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	SYP	P08247	313 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	PFKL	P17858	780 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	PLCG1	P19174	1290 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	ARL4A	P40617	200 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	MC3R	P41968	323 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	RPS26	P62854	115 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	TMEM62	Q0P6H9	643 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	SNW1	Q13573	536 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	ZC3H14	Q6PJT7	736 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	SLFN12	Q8IYM2	578 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	ENOX1	Q8TC92	643 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	DVL3	Q92997	716 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	TNFRSF10D	Q9UBN6	386 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	TAF6L	Q9Y6J9	622 aa		4.07	□□□□□ -1.76
PTPN12-212	ENST00000494248	WTIP	A6NIX2	430 aa	Predicted RBP	4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	DNAJA2	O60884	412 aa		4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	FZD7	O75084	574 aa		4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	PLAT	P00750	562 aa		4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	TNNI2	P48788	182 aa		4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	PCBP3	P57721	371 aa	Known RBP	4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	TMEM201	Q5SNT2	666 aa		4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	AGMO	Q6ZNB7	445 aa		4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	ZNF761	Q86XN6	746 aa	Predicted RBP	4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	ZNF655	Q8N720	491 aa	Predicted RBP	4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	TMEM52	Q8NDY8	209 aa		4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	NUP43	Q8NFH3	380 aa		4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	FCRL2	Q96LA5	508 aa	Predicted RBP	4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	ERVK13-1	Q9NX77	482 aa		4.06	□□□□□ -1.76
PTPN12-212	ENST00000494248	GIPC1	O14908	333 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	AMH	P03971	560 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	TFE3	P19532	575 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	GJA9	P57773	515 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	RPL6	Q02878	288 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	MVK	Q03426	396 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	NOX5	Q96PH1	765 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	JMJD8	Q96S16	334 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	C12orf49	Q9H741	205 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	C1orf115	Q9H7X2	142 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	IMPACT	Q9P2X3	320 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	DCTN4	Q9UJW0	460 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	TSC22D4	Q9Y3Q8	395 aa		4.05	□□□□□ -1.76
PTPN12-212	ENST00000494248	SOWAHD	A6NJG2	315 aa		4.04	□□□□□ -1.76
PTPN12-212	ENST00000494248	YARS	P54577	528 aa	Known RBP	4.04	□□□□□ -1.76
PTPN12-212	ENST00000494248	TARBP2	Q15633	366 aa	Known RBP	4.04	□□□□□ -1.76

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