RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 C19orf73Q9NVV2 129 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 PAX4O43316 350 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 TNK2Q07912 1038 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 CAMK2GQ13555 558 aaPredicted RBP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 ZNF507Q8TCN5 953 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 Q96M66 194 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 ST14Q9Y5Y6 855 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 GNAT3A8MTJ3 354 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 TLR3O15455 904 aaKnown RBP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 ZNF648Q5T619 568 aaPredicted RBP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 TMEM87BQ96K49 555 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 GOLGA2P5Q9HBQ8 144 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 SEMA3GQ9NS98 782 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 KLHL3Q9UH77 587 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 NWD2Q9ULI1 1742 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 MAPK8IP1Q9UQF2 711 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 POLR3KQ9Y2Y1 108 aaPredicted RBP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 USP31Q70CQ4 1352 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 TMEM265A0A087WTH1 108 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 PATL2C9JE40 543 aaKnown RBP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 GBP2P32456 591 aaPredicted RBP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 RPL6Q02878 288 aaKnown RBP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 ANGEL2Q5VTE6 544 aaKnown RBP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 STK11IPQ8N1F8 1099 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 GOLM1Q8NBJ4 401 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 NOC4LQ9BVI4 516 aaKnown RBP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 CARS2Q9HA77 564 aaKnown RBP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 MKNK2Q9HBH9 465 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 GTF2IRD1Q9UHL9 959 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 VAV3Q9UKW4 847 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 SNCAIPQ9Y6H5 919 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 CAPN6Q9Y6Q1 641 aa3.55□□□□□ -1.84
CDC42EP3-205ENST00000494083 PIK3C2GO75747 1445 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 KDM3BQ7LBC6 1761 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 MRS2Q9HD23 443 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 CDK12Q9NYV4 1490 aaPredicted RBP3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 LMO7Q8WWI1 1683 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 FAM155AB1AL88 458 aaPredicted RBP3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 LRRN2O75325 713 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 CST3P01034 146 aaPredicted RBP3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 ZNF865P0CJ78 1059 aaPredicted RBP3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 ZNF124Q15973 351 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 SFRP5Q5T4F7 317 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 FBXL19Q6PCT2 694 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 MRPL41Q8IXM3 137 aaKnown RBP3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 TRMT2AQ8IZ69 625 aaKnown RBP3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 UBE2Q2Q8WVN8 375 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 MISP3Q96FF7 219 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 IGF2BP3O00425 579 aaKnown RBP eCLIP3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 CILPO75339 1184 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 PLCG1P19174 1290 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 ST13P50502 369 aaKnown RBP3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 TSNAXIP1Q2TAA8 658 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 LDLRAD1Q5T700 205 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 DNAJB8Q8NHS0 232 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 PI4K2BQ8TCG2 481 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 PPP1R13LQ8WUF5 828 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 FRMD6Q96NE9 622 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 BCL2L13Q9BXK5 485 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 KCNK12Q9HB15 430 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 TSPOAP1O95153 1857 aa3.54□□□□□ -1.84
CDC42EP3-205ENST00000494083 KIF13AQ9H1H9 1805 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 UBR1Q8IWV7 1749 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 ANKRD50Q9ULJ7 1429 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 GLI3P10071 1580 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 IGSF3O75054 1194 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 POLR2BP30876 1174 aaKnown RBP3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 KCT2Q8NC54 265 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 RGS22Q8NE09 1264 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 GATAD2BQ8WXI9 593 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 ZSWIM5Q9P217 1185 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 REV1Q9UBZ9 1251 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 CCDC9Q9Y3X0 531 aaKnown RBP3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 SHISA3A0PJX4 238 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 GARTP22102 1010 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 DDIT3P35638 169 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 RALGPS1Q5JS13 557 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 MCATQ8IVS2 390 aaKnown RBP3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 MFSD2AQ8NA29 543 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 ASB11Q8WXH4 323 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 FAM168AQ92567 244 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 LIN37Q96GY3 246 aaPredicted RBP3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 TMEM74Q96NL1 305 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 NHSL1Q5SYE7 1610 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 FER1L4A9Z1Z3 1794 aa3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 TROQ12816 1431 aaPredicted RBP3.53□□□□□ -1.84
CDC42EP3-205ENST00000494083 DNAJC25-GNG10A0A024R161 153 aa3.53□□□□□ -1.85
CDC42EP3-205ENST00000494083 CHURC1-FNTBB4DL54 471 aa3.53□□□□□ -1.85
CDC42EP3-205ENST00000494083 HTR3BO95264 441 aa3.53□□□□□ -1.85
CDC42EP3-205ENST00000494083 CAP2P40123 477 aa3.53□□□□□ -1.85
CDC42EP3-205ENST00000494083 UBE2FQ969M7 185 aa3.53□□□□□ -1.85
CDC42EP3-205ENST00000494083 CFAP65Q6ZU64 1925 aaKnown RBP3.52□□□□□ -1.85
CDC42EP3-205ENST00000494083 ZNF503-AS2A6NEH8 195 aa3.52□□□□□ -1.85
CDC42EP3-205ENST00000494083 CLCN7P51798 805 aa3.52□□□□□ -1.85
CDC42EP3-205ENST00000494083 ERVFC1P60507 584 aa3.52□□□□□ -1.85
CDC42EP3-205ENST00000494083 SCARA3Q6AZY7 606 aa3.52□□□□□ -1.85
CDC42EP3-205ENST00000494083 SLC23A3Q6PIS1 610 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms